Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20attenuata_20[refseq_20GCF_5F001879085.1_202016-11-15]
37,194 sequences; 2,365,682,703 total letters
Query= NC_028834.1
Length=48216
Score E
Sequences producing significant alignments: (Bits) Value
seq4627 80.6 8e-11
seq123 80.6 8e-11
seq9 80.6 8e-11
seq7 80.6 8e-11
>seq4627
Length=82911
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 66496 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 66437
Query 36341 C 36341
|
Sbjct 66436 C 66436
>seq123
Length=934905
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 830941 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 830882
Query 36341 C 36341
|
Sbjct 830881 C 830881
>seq9
Length=50975570
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 41856895 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 41856836
Query 36341 C 36341
|
Sbjct 41856835 C 41856835
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Plus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 41859366 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 41859425
Query 36341 C 36341
|
Sbjct 41859426 C 41859426
>seq7
Length=114765206
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 72514678 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 72514619
Query 36341 C 36341
|
Sbjct 72514618 C 72514618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 154101506563784
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |