Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06]
53,128 sequences; 1,222,768,627 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq48471 100 6e-16
seq51668 98.7 2e-15
seq50896 98.7 2e-15
seq50096 98.7 2e-15
seq49489 98.7 2e-15
seq47994 98.7 2e-15
seq37707 98.7 2e-15
seq30309 98.7 2e-15
seq28524 98.7 2e-15
seq26518 98.7 2e-15
seq21170 98.7 2e-15
seq13515 98.7 2e-15
seq12540 98.7 2e-15
seq8811 98.7 2e-15
seq7502 98.7 2e-15
seq1825 98.7 2e-15
seq10553 95.1 3e-14
seq3005 95.1 3e-14
seq51369 93.3 9e-14
seq28935 86.0 1e-11
>seq48471
Length=178333
Score = 100 bits (110), Expect = 6e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
||||||||||||||||| |||||||||| || || |||| || |||||||||||||||||
Sbjct 138630 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 138571
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 138570 CCCCACGGTGGGC 138558
>seq51668
Length=32080
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 2993 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 2934
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 2933 CCCACGGTGGGC 2922
>seq50896
Length=231056
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 96730 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 96789
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 96790 CCCACGGTGGGC 96801
>seq50096
Length=53107
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 8558 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 8617
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 8618 CCCACGGTGGGC 8629
>seq49489
Length=40125
Score = 98.7 bits (108), Expect = 2e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767
||||| |||||||||||| |||||||||| || || |||| || ||||||||||||||||
Sbjct 22122 TTGCCTGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 22063
Query 165768 GCCCCACGATGGGC 165781
|||||||| |||||
Sbjct 22062 GCCCCACGGTGGGC 22049
>seq47994
Length=55818
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 22883 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 22942
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 22943 CCCACGGTGGGC 22954
>seq37707
Length=229962
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 193022 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 193081
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 193082 CCCACGGTGGGC 193093
>seq30309
Length=99388
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 93862 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 93803
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 93802 CCCACGGTGGGC 93791
>seq28524
Length=98559
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 92084 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 92025
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 92024 CCCACGGTGGGC 92013
>seq26518
Length=146681
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 19881 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 19822
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 19821 CCCACGGTGGGC 19810
>seq21170
Length=85678
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 27702 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 27761
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 27762 CCCACGGTGGGC 27773
>seq13515
Length=169911
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 20384 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 20443
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 20444 CCCACGGTGGGC 20455
>seq12540
Length=123066
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 34626 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 34567
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 34566 CCCACGGTGGGC 34555
>seq8811
Length=181991
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 138787 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 138846
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 138847 CCCACGGTGGGC 138858
>seq7502
Length=197050
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 162619 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 162560
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 162559 CCCACGGTGGGC 162548
>seq1825
Length=197613
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 127594 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 127653
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 127654 CCCACGGTGGGC 127665
>seq10553
Length=209583
Score = 95.1 bits (104), Expect = 3e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 165707 CTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCG 165766
|| |||||||||||||||| |||||||||| || || |||| || |||||| ||||||||
Sbjct 104100 CTAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCATGGGTTCG 104041
Query 165767 AGCCCCACGATGGGC 165781
||||||||| |||||
Sbjct 104040 AGCCCCACGGTGGGC 104026
>seq3005
Length=25992
Score = 95.1 bits (104), Expect = 3e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| ||||||| || || || |||| || ||||||||||||||||||
Sbjct 9277 GCCCGTCTAGCTCAGTTGGTAGAGAGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 9218
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 9217 CCCACGGTGGGC 9206
>seq51369
Length=28725
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/73 (89%), Gaps = 2/73 (3%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGT--TCGA 165767
|||||||||||||||| |||||||||| || || ||||||| |||||||||||| ||||
Sbjct 3111 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAATCTTGTGGTCGTGGGTTCTCGA 3170
Query 165768 GCCCCACGATGGG 165780
|||||||| ||||
Sbjct 3171 GCCCCACGGTGGG 3183
>seq28935
Length=244421
Score = 86.0 bits (94), Expect = 1e-11
Identities = 173/255 (68%), Gaps = 4/255 (2%)
Strand=Plus/Plus
Query 61209 AATTACCGCGAGTCGTATGGAATGTTTGTATGTAACTCGATTTGTTTCAATCACGAGAGT 61268
||||||||||| |||| || || || | || ||| ||||| ||||||||||||
Sbjct 102462 AATTACCGCGAAGCGTACGGGATATTCGCGTGCAACGGGATTTTATTCAATCACGAGTCG 102521
Query 61269 CCCAATAGAGGTCATCAGTTTGTGACTCGTAAAATTACGAAGGCGGTTGCAAATATTTTT 61328
|| | ||||| | | || ||||| | || ||||| ||| || | | |||
Sbjct 102522 CCACGTCGAGGTGAGAATTTCGTGACGAGGAAGATTACTCGGGCTGTAGGGAGAATTAAA 102581
Query 61329 AACGGTGTCGAAA--AATGCATGTATCTAGGAAACATAGACTCTAAAAGAGATTGGGGAT 61386
| ||| | ||| || | ||| | ||||||| || | | ||| || ||||| |
Sbjct 102582 ATCGGGTTACAAAGCAAGG--TGTTTTTAGGAAATTTACAAGCGTCAAGGGACTGGGGTT 102639
Query 61387 ATGCGGAAGATTATATCGAGGCTATGTGGTTGATGTTGCAACAAGATACTCCAGATGACT 61446
||| | ||| || | || || |||||| ||||| |||| ||||| | |||||||| |
Sbjct 102640 TTGCTGGAGACTACGTAGAAGCAATGTGGATGATGCTGCAGCAAGAGAAGCCAGATGATT 102699
Query 61447 ACGTTATTGCGACTG 61461
||||| | |||||||
Sbjct 102700 ACGTTGTGGCGACTG 102714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057103936558640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |