Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06] 53,128 sequences; 1,222,768,627 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq48471 100 6e-16 seq51668 98.7 2e-15 seq50896 98.7 2e-15 seq50096 98.7 2e-15 seq49489 98.7 2e-15 seq47994 98.7 2e-15 seq37707 98.7 2e-15 seq30309 98.7 2e-15 seq28524 98.7 2e-15 seq26518 98.7 2e-15 seq21170 98.7 2e-15 seq13515 98.7 2e-15 seq12540 98.7 2e-15 seq8811 98.7 2e-15 seq7502 98.7 2e-15 seq1825 98.7 2e-15 seq10553 95.1 3e-14 seq3005 95.1 3e-14 seq51369 93.3 9e-14 seq28935 86.0 1e-11 >seq48471 Length=178333 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 138630 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 138571 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 138570 CCCCACGGTGGGC 138558 >seq51668 Length=32080 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 2993 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 2934 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2933 CCCACGGTGGGC 2922 >seq50896 Length=231056 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 96730 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 96789 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 96790 CCCACGGTGGGC 96801 >seq50096 Length=53107 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 8558 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 8617 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 8618 CCCACGGTGGGC 8629 >seq49489 Length=40125 Score = 98.7 bits (108), Expect = 2e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||| |||||||||||| |||||||||| || || |||| || |||||||||||||||| Sbjct 22122 TTGCCTGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 22063 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 22062 GCCCCACGGTGGGC 22049 >seq47994 Length=55818 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 22883 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 22942 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 22943 CCCACGGTGGGC 22954 >seq37707 Length=229962 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 193022 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 193081 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 193082 CCCACGGTGGGC 193093 >seq30309 Length=99388 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 93862 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 93803 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 93802 CCCACGGTGGGC 93791 >seq28524 Length=98559 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 92084 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 92025 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 92024 CCCACGGTGGGC 92013 >seq26518 Length=146681 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 19881 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 19822 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 19821 CCCACGGTGGGC 19810 >seq21170 Length=85678 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 27702 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 27761 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 27762 CCCACGGTGGGC 27773 >seq13515 Length=169911 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 20384 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 20443 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 20444 CCCACGGTGGGC 20455 >seq12540 Length=123066 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 34626 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 34567 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 34566 CCCACGGTGGGC 34555 >seq8811 Length=181991 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 138787 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 138846 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 138847 CCCACGGTGGGC 138858 >seq7502 Length=197050 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 162619 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 162560 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 162559 CCCACGGTGGGC 162548 >seq1825 Length=197613 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 127594 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 127653 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 127654 CCCACGGTGGGC 127665 >seq10553 Length=209583 Score = 95.1 bits (104), Expect = 3e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 165707 CTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCG 165766 || |||||||||||||||| |||||||||| || || |||| || |||||| |||||||| Sbjct 104100 CTAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCATGGGTTCG 104041 Query 165767 AGCCCCACGATGGGC 165781 ||||||||| ||||| Sbjct 104040 AGCCCCACGGTGGGC 104026 >seq3005 Length=25992 Score = 95.1 bits (104), Expect = 3e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| ||||||| || || || |||| || |||||||||||||||||| Sbjct 9277 GCCCGTCTAGCTCAGTTGGTAGAGAGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 9218 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 9217 CCCACGGTGGGC 9206 >seq51369 Length=28725 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/73 (89%), Gaps = 2/73 (3%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGT--TCGA 165767 |||||||||||||||| |||||||||| || || ||||||| |||||||||||| |||| Sbjct 3111 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAATCTTGTGGTCGTGGGTTCTCGA 3170 Query 165768 GCCCCACGATGGG 165780 |||||||| |||| Sbjct 3171 GCCCCACGGTGGG 3183 >seq28935 Length=244421 Score = 86.0 bits (94), Expect = 1e-11 Identities = 173/255 (68%), Gaps = 4/255 (2%) Strand=Plus/Plus Query 61209 AATTACCGCGAGTCGTATGGAATGTTTGTATGTAACTCGATTTGTTTCAATCACGAGAGT 61268 ||||||||||| |||| || || || | || ||| ||||| |||||||||||| Sbjct 102462 AATTACCGCGAAGCGTACGGGATATTCGCGTGCAACGGGATTTTATTCAATCACGAGTCG 102521 Query 61269 CCCAATAGAGGTCATCAGTTTGTGACTCGTAAAATTACGAAGGCGGTTGCAAATATTTTT 61328 || | ||||| | | || ||||| | || ||||| ||| || | | ||| Sbjct 102522 CCACGTCGAGGTGAGAATTTCGTGACGAGGAAGATTACTCGGGCTGTAGGGAGAATTAAA 102581 Query 61329 AACGGTGTCGAAA--AATGCATGTATCTAGGAAACATAGACTCTAAAAGAGATTGGGGAT 61386 | ||| | ||| || | ||| | ||||||| || | | ||| || ||||| | Sbjct 102582 ATCGGGTTACAAAGCAAGG--TGTTTTTAGGAAATTTACAAGCGTCAAGGGACTGGGGTT 102639 Query 61387 ATGCGGAAGATTATATCGAGGCTATGTGGTTGATGTTGCAACAAGATACTCCAGATGACT 61446 ||| | ||| || | || || |||||| ||||| |||| ||||| | |||||||| | Sbjct 102640 TTGCTGGAGACTACGTAGAAGCAATGTGGATGATGCTGCAGCAAGAGAAGCCAGATGATT 102699 Query 61447 ACGTTATTGCGACTG 61461 ||||| | ||||||| Sbjct 102700 ACGTTGTGGCGACTG 102714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057103936558640