Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06] 53,128 sequences; 1,222,768,627 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq2425 89.7 4e-13 seq5136 82.4 6e-11 >seq2425 Length=283500 Score = 89.7 bits (98), Expect = 4e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 101752 AGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCC 101811 ||| |||||||| | |||||| || || | || ||| || ||||||||||||||||| Sbjct 95189 AGTAACATGAGCTACCATGCATGTCAACAAAGCATATGATGCGATGTTAAATGGCACTCC 95130 Query 101812 TAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGA 101850 ||| |||||||| || || | ||||||| ||||||||| Sbjct 95129 TAAACCCATATCTGCAGAGCGCTGATACATTTGACAGGA 95091 >seq5136 Length=107705 Score = 82.4 bits (90), Expect = 6e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 |||||||| |||||||| || | | | ||| |||||||||||||||||||| | Sbjct 75310 ACATGAGCTATCATGCATGTCAGCAAGGCATAAGATGCAATGTTAAATGGCACTCCCAGA 75369 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGA 101850 ||||||||||| |||| ||||||| |||||||| Sbjct 75370 CCCATATCAGCAGATCGCTGATACATCTGACAGGA 75404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361017290751128