Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06]
53,128 sequences; 1,222,768,627 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq20296 120 3e-22
seq51452 111 2e-19
seq3636 105 8e-18
seq19192 104 3e-17
seq50574 96.9 4e-15
seq32633 96.9 4e-15
seq33627 91.5 2e-13
seq50758 89.7 6e-13
seq3114 82.4 9e-11
>seq20296
Length=523354
Score = 120 bits (132), Expect = 3e-22
Identities = 160/220 (73%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||| | ||||||||| | ||| ||||| || || ||||||||||| || || || |
Sbjct 452956 ACGAAGCACCAAATGGAGAGTGGATTCCTTCTGGATGTTGTAATCAGCTAGGGTTCGGCC 452897
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
|| || ||||| || || ||||| ||||| ||||||||||| | || | || |||||
Sbjct 452896 ATCCTCCAGCTGTTTTCCGGCGAAAATGAGCCGCTGCTGGTCCGGTGGAATGCCTTCCTT 452837
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146
|||| ||| ||| || | ||| | | | |||||| ||||| || || | ||||
Sbjct 452836 GTCCTGGATCTTTGCCTTCA-CGTTGTCGATTGTGTCGGAGGATTCGACCTCAAGGGTGA 452778
Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186
|||| || |||||||| || || || ||||| ||||| ||
Sbjct 452777 TGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATCTT 452738
>seq51452
Length=252770
Score = 111 bits (122), Expect = 2e-19
Identities = 145/197 (74%), Gaps = 8/197 (4%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| ||||||||||||||||| || |||| | || || | |||||| ||||| ||
Sbjct 3874 CTCCTTCTGAATATTGTAATCAGCAAGTGTCCTACCATCCTCCAACTGCTTCCCAGCAAA 3933
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110
|| || | ||||||||| | || | || |||||| ||| ||| | |||| || |
Sbjct 3934 GATAAGCCTCTGCTGGTCTGGTGGAATGCCCTCCTTATCC-TGAATCTTTGCCTTCACAT 3992
Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167
| | | |||||| |||| || || || | ||||||||||| ||||||| || |
Sbjct 3993 TGTCAATCGTGTCTGAGCTC---TCAACTTCTAATGTGATGGTTTTTCCCGTTAAGGTTT 4049
Query 43168 TTACAAAGATTTGCATT 43184
| |||||||||||||||
Sbjct 4050 TAACAAAGATTTGCATT 4066
Score = 96.9 bits (106), Expect = 4e-15
Identities = 142/197 (72%), Gaps = 8/197 (4%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||||||||| || || ||||| ||||||| | | || || | ||||| || || ||
Sbjct 58251 CTCCTTTTGAATGTTATAGTCAGCAAGAGTCCTCCCATCTTCCAATTGCTTTCCTGCAAA 58310
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
||| || | ||||| || | || | || ||||||| | ||| |||||| | | | |
Sbjct 58311 TATCAGCCTTTGCTGATCCGGTGGGATGCCTTCCTTGT-CTTGAATTTTTGCCTTAACAT 58369
Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167
| | | |||||| |||| || || || | ||||| ||||| || |||| ||||
Sbjct 58370 TGTCAATCGTGTCCGAGCTC---TCAACTTCCAATGTGATTGTTTTCCCAGTTAAGGTCT 58426
Query 43168 TTACAAAGATTTGCATT 43184
| |||||||||||||||
Sbjct 58427 TAACAAAGATTTGCATT 58443
Score = 95.1 bits (104), Expect = 1e-14
Identities = 141/196 (72%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||||||||||||||| ||||| || ||||| ||| | || || || ||||| || || ||
Sbjct 4786 CTCCTTTTGAATATTATAATCTGCGAGAGTACGCCCATCTTCCAGTTGCTTCCCTGCAAA 4845
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
||| || | |||||| || | || | | |||||||| | || |||| | | | | |
Sbjct 4846 TATCAGCCTCTGCTGATCCGGTGGGATACCCTCCTTGT-CTTGTATTTTCGCCTTAACAT 4904
Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167
| | | ||||| ||| ||| || || | ||||||||||| || ||||| || |
Sbjct 4905 TGTCTATGGTGTCCGAGCT---TTCAACTTCCAGTGTGATGGTTTTTCCAGTTAGGGTTT 4961
Query 43168 TTACAAAGATTTGCAT 43183
| |||||||| |||||
Sbjct 4962 TAACAAAGATCTGCAT 4977
Score = 86.0 bits (94), Expect = 7e-12
Identities = 139/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||| || || || |||||||||||||| | | || |||| ||||| ||||| ||
Sbjct 58708 TCCTTCTGGATGTTATAATCAGCCAGAGTTCTTCCATCTTCTAATTGCTTCCCAGCAAAA 58767
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| | | |||||| || | || | | |||||||| | ||| |||| | | | | |
Sbjct 58768 ATCAACCTCTGCTGATCAGGTGGGATACCCTCCTTGT-CTTGAATTTTAGACTTAACATT 58826
Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168
| | | |||||| |||| || || || | |||||| ||||| || |||| |||||
Sbjct 58827 GTCTATCGTGTCCGAGCTC---TCAACTTCCAACGTGATTGTTTTTCCAGTTAAGGTCTT 58883
Query 43169 TACAAAGATTTGCATT 43184
||||| |||||||||
Sbjct 58884 AACAAAAATTTGCATT 58899
Score = 84.2 bits (92), Expect = 2e-11
Identities = 140/201 (70%), Gaps = 6/201 (3%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||||||||||||||||||||| || ||||| || | || || ||||| || || |||||
Sbjct 59163 CTCCTTTTGAATATTGTAATCTGCGAGAGTATGCCCATCCTCGAGCTGTTTTCCTGCGAA 59222
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| | || || || || | || | | || |||||| |||||| ||| | |
Sbjct 59223 GATCAAACGTTGTTGATCTGGTGGAATACCTTCTTTGTCCTGGATTTTGGCTTTAACATT 59282
Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168
| | |||||| ||| || || |||| || | ||| ||||| || || |||||
Sbjct 59283 GTCGATCGTGTCTGAACTC---TCAACTTCGAGAGTTACGGTCTTGCCAGTCAGGGTCTT 59339
Query 43169 TACAAAGATTTGCATTTTTAC 43189
|||||||| ||||| | |||
Sbjct 59340 CACAAAGATCTGCATCTGTAC 59360
>seq3636
Length=134301
Score = 105 bits (116), Expect = 8e-18
Identities = 91/113 (81%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
||||| || ||||| | |||||||||||| ||| ||| || || ||||||||||||||
Sbjct 16081 CCTCCCCTCAAACGGAGCACCAAATGCAACGTGGACTCTTTCTGGATATTGTAATCAGCA 16022
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 43069
|| |||| | | || || |||||||||||||| || || | ||||||||| ||
Sbjct 16021 AGGGTCCTCCCATCCTCAAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATC 15969
Score = 102 bits (112), Expect = 9e-17
Identities = 142/195 (73%), Gaps = 8/195 (4%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
|||||||| || ||||| || || ||||| || | || ||||||||||| ||||| ||
Sbjct 15361 TCCTTTTGGATGTTGTAGTCGGCAAGAGTGCGGCCATCCTCTAGCTGCTTTCCAGCAAAG 15302
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111
|| | | |||||| |||| || | | ||||||||| ||| | || | |||| |
Sbjct 15301 ATCAACCTCTGCTGATCGGGAGGGATTCCTTCCTTGTCC-TGAATCTTAGCCTTGACATT 15243
Query 43112 CGCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168
| | |||||| ||| || || |||| || |||||||| || || ||||||||
Sbjct 15242 ATCAATAGTGTCGGAACTC---TCAACCTCGAGAGTAATGGTTTTTCCGGTGAGCGTCTT 15186
Query 43169 TACAAAGATTTGCAT 43183
|||||||||||||||
Sbjct 15185 TACAAAGATTTGCAT 15171
Score = 87.8 bits (96), Expect = 2e-12
Identities = 137/195 (70%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||||||||||||||| || || ||||| || | || || |||||||| ||||| ||
Sbjct 15818 CTCCTTTTGAATATTGTAGTCGGCAAGAGTTCGTCCATCCTCAAGCTGCTTTCCAGCAAA 15759
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| | || ||||||||| | || | || ||||||||| ||| || || | |
Sbjct 15758 AATCAATCTCTGCTGGTCTGGAGGGATGCCTTCCTTGTCCTGGATCTTCGCCTTAACATT 15699
Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168
| | ||||| |||| || || |||| |||||||| || || || | |||||
Sbjct 15698 GTCAATGGTGTCCGAGCTC---TCAACTTCGAGGGTGATGGTCTTCCCAGTCAATGTCTT 15642
Query 43169 TACAAAGATTTGCAT 43183
|| || || |||||
Sbjct 15641 AACGAAAATCTGCAT 15627
>seq19192
Length=430667
Score = 104 bits (114), Expect = 3e-17
Identities = 164/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
||||| || ||||||||||||| ||| | ||| |||||| || || || ||||||||
Sbjct 373406 CCTCCCCTCAAACGCAACACCAGATGAAGTGTCGACTCCTTCTGTATGTTATAATCAGCA 373465
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| |||| | || || || ||||| || || ||||| |||||||||||||| | ||
Sbjct 373466 AGTGTCCTTCCATCTTCAAGTTGCTTCCCTGCAAATATCAGTCGCTGCTGGTCTGGGGGA 373525
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGA---TTC 43132
| | ||||||| | ||| |||| | || | | | | ||||| ||| ||
Sbjct 373526 ATCCCTTCCTTGT-CTTGAATTTTGGCCTTCACATTATCAATTGTGTC---CGAACTCTC 373581
Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || | ||||| ||||| || || | ||||| ||||||||||||||
Sbjct 373582 AACCTCCAAGGTGATAGTTTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 373632
Score = 104 bits (114), Expect = 3e-17
Identities = 143/196 (73%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||||||||||||||||||||| ||||| || | || || |||||||| ||||| ||
Sbjct 374125 CTCCTTTTGAATATTGTAATCAGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAA 374184
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110
|| || | ||||||||| | || | | ||||||| | ||| |||| | || |
Sbjct 374185 GATCAGCCTCTGCTGGTCTGGGGGAATCCCTTCCTTGT-CTTGAATTTTGGCCTTCACGT 374243
Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167
| | | ||||| ||| || || |||| ||||||||||| || || || ||||
Sbjct 374244 TATCAATTGTGTCTGAACTC---TCAACCTCGAGAGTGATGGTTTTTCCAGTGAGTGTCT 374300
Query 43168 TTACAAAGATTTGCAT 43183
| |||||||| |||||
Sbjct 374301 TCACAAAGATCTGCAT 374316
Score = 93.3 bits (102), Expect = 5e-14
Identities = 140/195 (72%), Gaps = 8/195 (4%)
Strand=Plus/Plus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
|||||||| ||||||||||| || || || ||| | || || |||||||||||||| |||
Sbjct 373214 TCCTTTTGGATATTGTAATCTGCAAGGGTGCGCCCATCCTCCAGCTGCTTACCAGCAAAT 373273
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
||||| | |||||| || | || | | || |||||| ||| |||| | | |||
Sbjct 373274 ATGAGCCTCTGCTGATCTGGTGGGATCCCTTCTTTGTCC-TGAATTTTGGCCTTCACGTT 373332
Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168
| | | ||||| |||| ||||| || | |||||||| || || || | || ||
Sbjct 373333 GTCAATAGTGTCAGAGCTC---TCCACTTCCAAAGTGATGGTCTTCCCTGTCAAAGTTTT 373389
Query 43169 TACAAAGATTTGCAT 43183
||||| || |||||
Sbjct 373390 AACAAATATCTGCAT 373404
Score = 91.5 bits (100), Expect = 2e-13
Identities = 140/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||||||||||||||||||||| ||||| || | || || |||||||| ||||| ||
Sbjct 373897 CTCCTTTTGAATATTGTAATCAGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAA 373956
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110
|| || | ||||||||| | || | | ||||||| | ||| |||| | || |
Sbjct 373957 GATCAGCCTCTGCTGGTCTGGAGGAATCCCTTCCTTGT-CTTGAATTTTCGCCTTCACGT 374015
Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167
| | | ||||| ||| || || || | || ||||||||||| || || || |
Sbjct 374016 TATCAATTGTGTCTGAACTC---TCGACCTCAAGAGTAATGGTTTTGCCAGTAAGAGTTT 374072
Query 43168 TTACAAAGATTTGCAT 43183
| ||||| || |||||
Sbjct 374073 TAACAAATATCTGCAT 374088
>seq50574
Length=377344
Score = 96.9 bits (106), Expect = 4e-15
Identities = 163/232 (70%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
|||||| || | | || ||||||||||| ||| |||||| ||||| ||||| || ||
Sbjct 94592 TCCTCCCCTCAGCCTCAGCACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGC 94651
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
|| || || | || || | |||||| || || ||||| || | ||||||||| | ||
Sbjct 94652 AAGGGTGCGACCATCTTCCAACTGCTTTCCTGCAAATATTAGCCTCTGCTGGTCTGGGGG 94711
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 43131
| | |||||||||| ||| || |||| ||| | | | ||||| ||| |
Sbjct 94712 AATCCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCAGAACTC---T 94767
Query 43132 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
| || || | |||||||| ||||| || || || || || ||||| |||||
Sbjct 94768 CGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTTTTGACGAAGATCTGCAT 94819
>seq32633
Length=132462
Score = 96.9 bits (106), Expect = 4e-15
Identities = 160/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
||||| || || || | ||||||||| | ||| ||| || || || || ||||||||
Sbjct 60430 CCTCCCCTCAACCGGAGCACCAAATGGAGGGTGGACTCTTTCTGGATGTTATAATCAGCA 60489
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
||||||| | | || || |||||||||||||| || || | ||||||||||| | ||
Sbjct 60490 AGAGTCCTCCCATCCTCAAGCTGCTTACCAGCAAAAATTAAACGCTGCTGGTCCGGGGGA 60549
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 43133
| | || ||||| ||| ||| ||| | | | | || || ||| ||
Sbjct 60550 ATACCTTCTTTGTCTTGGATCTTTGCTTTCACATTATCAATTGTATCTGAACTC---TCA 60606
Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || | |||||| || || || || | |||||| |||||||| |||||
Sbjct 60607 ACTTCCAGCGTGATTGTCTTCCCAGTCAACGTCTTCACAAAGATCTGCAT 60656
Score = 87.8 bits (96), Expect = 2e-12
Identities = 153/219 (70%), Gaps = 8/219 (4%)
Strand=Plus/Plus
Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028
|||| ||||||||| | || |||||||| || ||||||||||| || |||| |
Sbjct 60670 CGCAGCACCAAATGGAGGGTTGATTCCTTTTGGATGTTGTAATCAGCTAGTGTCCTTCCA 60729
Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088
|| || |||||||| ||||| || || || | ||||||||| | || | | |||||
Sbjct 60730 TCCTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCAGGTGGAATCCCTTCCTTA 60789
Query 43089 TCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGT 43144
| | ||| |||||| | | | | | | | ||||| |||| || || || | ||
Sbjct 60790 T-CTTGAATTTTTGCCTTAACATTGTCGATGGTGTCCGAGCTC---TCAACTTCAAGAGT 60845
Query 43145 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| ||||| || || | || || ||||||||||||||
Sbjct 60846 AATAGTTTTCCCAGTCAAGGTTTTCACAAAGATTTGCAT 60884
>seq33627
Length=115891
Score = 91.5 bits (100), Expect = 2e-13
Identities = 113/152 (74%), Gaps = 2/152 (1%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
||||| || |||||||| |||||||| | || |||||| || || || || || ||
Sbjct 50654 CCTCCCCTCAAACGCAAGACCAAATGGAGAGTCGCCTCCTTCTGGATGTTATAGTCCGCA 50595
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
||||||| |||| || || || |||||||| || || | ||||||||||| | |||
Sbjct 50594 AGAGTCCTGCCGTCCTCCAGTTGTTTACCAGCAAAGATCAAACGCTGCTGGTCTGGCGGG 50535
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGA 43107
| | |||||||| | ||| | |||| |||||
Sbjct 50534 ATACCCTCCTTGT-CTTGAATCTTTGCTTTGA 50504
>seq50758
Length=122349
Score = 89.7 bits (98), Expect = 6e-13
Identities = 140/195 (72%), Gaps = 4/195 (2%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || ||||||||||| || || || |||| || || ||||| || || ||
Sbjct 118455 CTCCTTCTGGATGTTGTAATCAGCGAGGGTTCGGCCGTCTTCAAGTTGCTTTCCGGCAAA 118396
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110
|| || | |||||||| | || | | |||||||||| ||| | || | |||| ||
Sbjct 118395 GATCAGCCTTTGCTGGTCTGGTGGAATACCCTCCTTGTCC-TGAATCTTAGCCTTGA-CG 118338
Query 43111 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169
| | | | |||||| |||||| || | ||||||||||| || || | |||||
Sbjct 118337 TTGTCAATTGTGTCGGAGCTTTCCACCTCCAAAGTGATGGTTTTCCCAGTCAAAGTCTTC 118278
Query 43170 ACAAAGATTTGCATT 43184
||||| || ||||||
Sbjct 118277 ACAAAAATCTGCATT 118263
Score = 82.4 bits (90), Expect = 9e-11
Identities = 150/217 (69%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||| | |||||| || | || |||||| ||||| ||||||||||| || || || |
Sbjct 118251 ACGGAGCACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCAGCTAGGGTACGGCC 118192
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
|| || | ||| || ||||| || || | | |||||| || | || | | ||| ||
Sbjct 118191 ATCTTCCAACTGTTTGCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCTTT 118132
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146
||| ||| | || | | | ||| | | | |||||| ||| || || | ||||
Sbjct 118131 ATCC-TGAATCTTCGCCTTAACGTTGTCAATTGTGTCGGAGCTTTCGACTTCAAGGGTGA 118073
Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
| ||||| || ||||| || || ||||||||||||||
Sbjct 118072 TTGTTTTCCCGGTTAGGGTTTTGACAAAGATTTGCAT 118036
Score = 82.4 bits (90), Expect = 9e-11
Identities = 150/217 (69%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||| | |||||| || | |||| ||||| || ||||| |||||||| | ||| | | |
Sbjct 118707 ACGGAGCACCAAGTGAAGTGTGGATTCCTTCTGGATATTATAATCAGCTAAAGTTCTCCC 118648
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
|| || | |||||||||||| || || | | ||||||||| | || | | ||||||
Sbjct 118647 ATCTTCCAACTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGGGATACCCTCCTT 118588
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146
|||| ||| | || | | | | | | | | || ||| ||| || |||| ||||
Sbjct 118587 GTCC-TGAATCTTCGCCTTAACATTGTCAATAGTATCGGAGCTTTCGACTTCGAGGGTGA 118529
Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
| || || || || || || || || ||||| |||||
Sbjct 118528 TAGTCTTCCCAGTGAGTGTTTTGACGAAGATCTGCAT 118492
>seq3114
Length=370656
Score = 82.4 bits (90), Expect = 9e-11
Identities = 138/197 (70%), Gaps = 2/197 (1%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || |||||||| ||||| || || || | || || ||||||||||| |||||
Sbjct 9892 CTCCTTCTGGATATTGTAGTCAGCTAGTGTTCGGCCATCCTCAAGCTGCTTACCTGCGAA 9951
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110
|| | ||||||||||| | || | | ||||||||| ||| | || | ||||
Sbjct 9952 AATCAACCGCTGCTGGTCTGGAGGAATTCCTTCCTTGTCC-TGAATCTTAGCCTTGACAT 10010
Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | ||||| || || || || | || || || || ||||| || ||||| |
Sbjct 10011 TGTCAATGGTGTCCGATGACTCTACCTCTAAGGTAATAGTCTTCCCCGTCAGGGTCTTCA 10070
Query 43171 CAAAGATTTGCATTTTT 43187
| || || ||||| |||
Sbjct 10071 CGAATATCTGCATCTTT 10087
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571437855931840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |