Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06] 53,128 sequences; 1,222,768,627 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq44697 89.7 5e-13 >seq44697 Length=182102 Score = 89.7 bits (98), Expect = 5e-13 Identities = 123/172 (72%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 14193 TAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTG 14252 || ||| ||||| ||||||||||| || | || || || ||| ||| | ||||| | Sbjct 113260 TATAAAGCAAACAAGCAAAATCACAGTGCAAACCTTCGTCCCTAGAAATTAACTCGTTCG 113319 Query 14253 AAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATC 14312 | || |||||||| ||||| || || || ||||||||||| ||||| ||| || || Sbjct 113320 AGAAGGTTAATCCAGGCATTAACCCCCGCTTTTTTAACCAGAATATAGCACAAAAGCTTC 113379 Query 14313 CGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAA 14364 |||| || || || || || || |||||| || | || || || |||| Sbjct 113380 CGGAGAAAAAAATACCTTCCACACAAGCAAATGCAACCAAACGCTCCGCAAA 113431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482025274287040