Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06]
53,128 sequences; 1,222,768,627 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq44697 134 1e-26
seq38302 116 3e-21
seq19192 109 5e-19
seq17618 109 5e-19
seq49251 104 2e-17
seq20296 104 2e-17
seq7668 104 2e-17
seq50758 98.7 9e-16
seq3636 96.9 3e-15
seq33627 91.5 1e-13
seq32633 91.5 1e-13
seq50574 89.7 5e-13
seq51452 86.0 6e-12
seq48040 86.0 6e-12
seq37995 82.4 7e-11
>seq44697
Length=182102
Score = 134 bits (148), Expect = 1e-26
Identities = 379/579 (65%), Gaps = 5/579 (1%)
Strand=Plus/Minus
Query 57546 ATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTT 57605
||||| || ||| |||| ||| | |||||| | ||||||||||| || ||| || ||
Sbjct 113845 ATGTTCCCAATTCAATACCCACAAATTTGGGAAATGTACAAAAAAGCCTTAGCCTCTTTC 113786
Query 57606 TGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAA 57665
||||| | |||||||| || ||||| ||| | | ||||| |||| | |
Sbjct 113785 TGGACTGCTGAAGAAGTCGATTTGTCTTCTGATAACCGTCACTGGGAAACCCTAACACCC 113726
Query 57666 TCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTT 57725
||| || |||| || | ||||| | || ||||| ||||| || || || || |||
Sbjct 113725 GGTGAAAGGCATTTCATCACTCACGTCCTTGCCTTTTTTGCCGCCTCAGACGGCATCGTT 113666
Query 57726 AACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTT 57785
|| || | | || ||| || ||||||| ||||| | ||||| | ||||||
Sbjct 113665 TTAGAAAACCTAGCCGGAAGGTTCATGAAAGAAGTCCAAGTTGCCGAGGCCCG-TGCTTT 113607
Query 57786 -TACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGA 57844
||||| || ||| | || ||||||||| | || || || ||||| || || | ||
Sbjct 113606 CTACGGCTTCCAAATCGCGATTGAAAACATCCACTCCGAGATGTACAGTCTGCTTCTAGA 113547
Query 57845 TACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCC 57904
||||| | |||||| ||||| ||| | ||| | ||| ||| | || || || ||
Sbjct 113546 GTCGTACATCAAGGACTCTGACGAAAAAAGCAGATTATTCCGCGCAGTTGAGACTATCCC 113487
Query 57905 CGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTT 57964
| | | |||||||| ||||| | | ||||| | || | | || ||
Sbjct 113486 CTGTGTTGAGAAGAAGGCGAAGTGGGCCCTACGTTGGATCGA---CGGTTCCGAAACATT 113430
Query 57965 CGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGC 58024
|| ||| | | | || || || || |||||||| || || || || ||||||
Sbjct 113429 TGCGGAGCGTTTGGTTGCATTTGCTTGTGTGGAAGGTATTTTTTTCTCCGGAAGCTTTTG 113370
Query 58025 GGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTT 58084
|| ||||| ||| | || || || || | ||||| || | || || ||||||||
Sbjct 113369 TGCTATATTCTGGTTAAAAAAGCGGGGGTTAATGCCTGGATTAACCTTCTCGAACGAGTT 113310
Query 58085 GATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTG 58123
|| || | ||||| ||| | || ||||||||| ||
Sbjct 113309 AATTTCTAGGGACGAAGGTTTGCACTGTGATTTTGCTTG 113271
>seq38302
Length=59671
Score = 116 bits (128), Expect = 3e-21
Identities = 375/579 (65%), Gaps = 5/579 (1%)
Strand=Plus/Minus
Query 57546 ATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTT 57605
||||| || ||| |||| ||| | |||||| | ||||||||||| || ||| || ||
Sbjct 23665 ATGTTCCCAATTCAATACCCACAAATTTGGGAAATGTACAAAAAAGCCTTAGCCTCTTTC 23606
Query 57606 TGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAA 57665
||||| | |||||||| || | ||| ||| | | ||||| |||| | |
Sbjct 23605 TGGACTGCGGAAGAAGTCGATTTATCTTCCGATACCCGTCACTGGGAAACCCTAACACCC 23546
Query 57666 TCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTT 57725
||| || |||| || | ||||| | || ||||| ||||| || || || || |||
Sbjct 23545 GGTGAAAGGCATTTCATCACTCACGTCCTTGCCTTTTTTGCCGCCTCAGACGGCATCGTT 23486
Query 57726 AACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTT 57785
|| || | | || || || ||||||| ||||| | ||||| | ||||||
Sbjct 23485 TTAGAAAACCTAGCCGGGAGGTTCATGAAAGAAGTCCAAGTTGCCGAGGCCCG-TGCTTT 23427
Query 57786 -TACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGA 57844
||||| || ||| | || ||||||||| | || || || ||||| || || | ||
Sbjct 23426 CTACGGCTTCCAAATCGCGATTGAAAACATCCACTCCGAGATGTACAGTCTGCTTCTAGA 23367
Query 57845 TACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCC 57904
||||| | |||||| ||||| ||| | ||| | ||| ||| | || || || ||
Sbjct 23366 GTCGTACATCAAGGACTCTGACGAAAAAAGCAGATTATTCCGCGCAGTTGAGACTATTCC 23307
Query 57905 CGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTT 57964
| | | |||||||| ||||| | | ||||| | || | | || ||
Sbjct 23306 CTGTGTTGAGAAGAAGGCGAAGTGGGCCCTACGTTGGATCGA---CGGTTCCGAAACATT 23250
Query 57965 CGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGC 58024
|| ||| | | | || || | || |||||||| || || || || ||||||
Sbjct 23249 TGCGGAGCGTTTGGTTGCATTTTCTTGTGTGGAAGGTATTTTTTTCTCTGGAAGCTTTTG 23190
Query 58025 GGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTT 58084
|| ||||| ||| | || || || || | ||||| || | || || ||||||||
Sbjct 23189 TGCTATATTCTGGTTAAAAAAGCGGGGGTTAATGCCTGGATTAACTTTCTCGAACGAGTT 23130
Query 58085 GATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTG 58123
|| || | ||||| ||| | || |||||| || ||
Sbjct 23129 AATTTCAAGGGACGAAGGTTTGCACTGTGATTTCGCTTG 23091
>seq19192
Length=430667
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
||||||||| || || |||||| ||||||| ||||| |||||| | || ||||| ||
Sbjct 373633 CATGCAAATCTTTGTCAAGACTTTGACAGGAAAAACTATCACCTTGGAGGTTGAGAGTTC 373574
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | || || | ||| ||||||||||| | || || |||||
Sbjct 373573 GGACACAATTGATAATGTGAAGGCCAAAATTCAAGACAAGGAAGGGATTCCCCCAGACCA 373514
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||| || ||||| || || || || | ||||| | ||| | ||||||||
Sbjct 373513 GCAGCGACTGATATTTGCAGGGAAGCAACTTGAAGATGGAAGGACACTTGCTGATTATAA 373454
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||| || || || ||||| ||||||||||| | | ||||||| ||||
Sbjct 373453 CATACAGAAGGAGTCGACACTTCATCTGGTGTTGCGTTTGAGGGGAGGTA 373404
>seq17618
Length=194525
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| || ||||| || || || || || ||||| |||||| | || |||||| |
Sbjct 72047 AAGATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACAATCACCCTTGAGGTTGAATCT 71988
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
||||||| |||| | || ||| | || ||||||||||| | || || ||
Sbjct 71987 TCCGACACAATCGACAATGTGAAAGCCAAGATCCAAGACAAGGAAGGGATTCCCCCAGAT 71928
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
||||||||||| || ||||| || || ||| | |||||| || | ||||||
Sbjct 71927 CAGCAGCGTCTGATTTTCGCCGGAAAGCAGCTTGAAGACGGCCGAACCCTAGCCGATTAC 71868
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || || || |||||||||||||| || ||
Sbjct 71867 AACATCCAGAAGGAGTCGACTCTTCATCTCGTGCT 71833
>seq49251
Length=53185
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| || ||||| || || || | || ||||| |||||| | || |||||| |
Sbjct 47381 AAGATGCAGATCTTCGTGAAAACCCTAGCGGGTAAAACAATCACCCTTGAGGTTGAATCT 47322
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
||||||| |||| | || ||| | || ||||||||||| | || || ||
Sbjct 47321 TCCGACACAATCGACAATGTGAAAGCCAAGATCCAAGACAAGGAAGGGATTCCCCCAGAT 47262
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
||||||||||| || |||| || || ||| | |||||| || | ||||||
Sbjct 47261 CAGCAGCGTCTGATTTTCGGCGGAAAGCAGCTTGAAGACGGCCGAACCCTAGCCGATTAC 47202
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || || ||||||||||||||||| || ||
Sbjct 47201 AACATCCAGAAGGAATCGACTCTTCATCTCGTGCT 47167
>seq20296
Length=523354
Score = 104 bits (114), Expect = 2e-17
Identities = 157/218 (72%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| || ||||| || || || || || || || |||||| | || || ||| |
Sbjct 452738 AAGATGCAGATCTTCGTGAAAACCCTAACGGGTAAGACCATCACCCTTGAGGTCGAATCC 452797
Query 31250 TCCGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308
||||||| |||| | || || || ||| | ||||||||||||| | || || ||
Sbjct 452798 TCCGACACAATCGACAACGTGAAGGCAAAGA-TCCAGGACAAGGAAGGCATTCCACCGGA 452856
Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATT 31367
||||||||| || || ||||| || |||||| |||| || | || ||| ||||
Sbjct 452857 CCAGCAGCGGCTCATTTTCGCCGGAAAACAGCTGGAGGA-TGGCCGAACCCTAGCTGATT 452915
Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
| ||||| || || ||||| ||||| ||| |||| |||
Sbjct 452916 ACAACATCCAGAAGGAATCCACTCTCCATTTGGTGCTT 452953
>seq7668
Length=316181
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| || ||||| || || || || || ||||| |||||| | || |||||| |
Sbjct 198516 AAGATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACAATCACCCTTGAGGTTGAATCT 198575
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
||||||| |||| | || ||| | || ||||||||||| | || || ||
Sbjct 198576 TCCGACACAATCGACAATGTGAAATCCAAGATCCAAGACAAGGAAGGGATTCCCCCAGAT 198635
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
||||||||||| || ||||| || || ||| | ||||| || | ||||||
Sbjct 198636 CAGCAGCGTCTGATTTTCGCCGGAAAGCAGCTTAAAGACGGCCGAACCCTAGCCGATTAC 198695
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || || || |||||||||||||| || ||
Sbjct 198696 AACATCCAGAAGGAGTCGACTCTTCATCTCGTGCT 198730
>seq50758
Length=122349
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || || || || || || ||||| |||||| | || |||||| |||
Sbjct 117808 ATGCAGATCTTTGTGAAAACCCTAACCGGTAAAACAATCACCCTTGAGGTTGAAAGCTCC 117867
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | || || || || |||||||||||| | || || ||||||
Sbjct 117868 GACACTATTGACAACGTTAAGGCGAAGATTCAGGACAAGGAAGGAATTCCACCGGACCAG 117927
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | || |||||||| || || ||| | |||||| | || | ||| || |||
Sbjct 117928 CAGAGGCTGATATTCGCCGGAAAGCAGCTCGAAGACGGCAGAACCCTAGCCGACTACAAC 117987
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|| || || ||||| || ||||| |||| || | || ||||| ||
Sbjct 117988 ATCCAGAAGGAATCTACCCTTCACTTGGTGCTCCGTCTTAGGGGAGG 118034
Score = 89.7 bits (98), Expect = 5e-13
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| || || || || || || || |||||| |||| || ||| |||
Sbjct 118492 ATGCAGATCTTCGTCAAAACACTCACTGGGAAGACTATCACCCTCGAAGTCGAAAGCTCC 118551
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | | || | || || || || ||||||||| || | || || ||||||
Sbjct 118552 GATACTATTGACAATGTTAAGGCGAAGATTCAGGACAAGGAGGGTATCCCACCAGACCAG 118611
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATAA 31371
||| | | || || ||||| || ||||||||||| | ||| | ||| ||||||||
Sbjct 118612 CAGAGGTTGATCTTTGCTGGTAAGCAGTTGGAAGATGGGAGAACT-TTAGCTGATTATAA 118670
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || || ||||| || ||||| |||| ||
Sbjct 118671 TATCCAGAAGGAATCCACACTTCACTTGGTGCT 118703
Score = 86.0 bits (94), Expect = 6e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
||||||||| || || || || || || || ||||| |||||| | || || ||| ||
Sbjct 118035 CATGCAAATCTTTGTCAAAACCCTAACCGGGAAAACAATCACCCTTGAAGTCGAAAGCTC 118094
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||||| | || | || || || || ||| || || || | || || || ||
Sbjct 118095 CGACACAATTGACAACGTTAAGGCGAAGATTCAGGATAAAGAGGGAATCCCACCAGATCA 118154
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATA 31370
|||| | | || || |||||||||||||||||||| || | ||| ||||| |
Sbjct 118155 GCAGAGGTTGATCTTTGCTGGCAAACAGTTGGAAGATGGCCGTACCCT-AGCTGATTACA 118213
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||||| || || ||||||||||| |||| ||
Sbjct 118214 ACATTCAGAAGGAGTCGACTCTTCACTTGGTGCT 118247
>seq3636
Length=134301
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| ||||| |||| || || || |||||| |||| ||||| ||
Sbjct 15627 ATGCAGATTTTCGTTAAGACATTGACTGGGAAGACCATCACCCTCGAAGTTGAGAGCTCG 15686
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | || || || || ||||||||||||| | || || ||||||
Sbjct 15687 GACACCATTGACAATGTTAAGGCGAAGATCCAGGACAAGGAAGGCATCCCTCCAGACCAG 15746
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371
||| | | || || ||||| || ||| | || || | | | ||| | ||| || ||
Sbjct 15747 CAGAGATTGATTTTTGCTGGAAAGCAGCTTGAGGA-TGGACGAACTCTTGCCGACTACAA 15805
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||| || || || || || || || ||| | |||||||| ||||
Sbjct 15806 TATTCAAAAGGAGTCCACCCTCCACCTTGTTCTTCGGCTGAGGGGTGGTA 15855
Score = 86.0 bits (94), Expect = 6e-12
Identities = 151/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 31185 AATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTG 31244
||| | | |||||||| || |||||||| || || || ||||| || || |||| ||||
Sbjct 15163 AATTACAGATGCAAATCTTTGTAAAGACGCTCACCGGAAAAACCATTACTCTCGAGGTTG 15222
Query 31245 AACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGC 31304
| ||||||| | | || | ||||| | || |||||||||||| | || |
Sbjct 15223 AGAGTTCCGACACTATTGATAATGTCAAGGCTAAGATTCAGGACAAGGAAGGAATCCCTC 15282
Query 31305 CCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCG 31364
|||| |||||| | | || || ||||| || ||| | || || ||| | ||
Sbjct 15283 CCGATCAGCAGAGGTTGATCTTTGCTGGAAAGCAGCTAGAGGATGGCCGCACTCTTGCCG 15342
Query 31365 ATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
| || ||||| ||||| ||||| || ||||| || || ||
Sbjct 15343 ACTACAACATCCAAAAGGAATCCACCCTTCACCTTGTCCT 15382
>seq33627
Length=115891
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| ||||| || |||||| |||| || || || || || | || ||||| ||
Sbjct 50427 CATGCATATTTTTGTCAAGACTTTGACTGGGAAGACAATAACTTTGGAGGTTGAGAGTTC 50486
Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310
|| | | || | |||||| || ||| | | ||||||| || | ||||| ||||
Sbjct 50487 TGATACCATTGACAATGTCAAAGCAAAGATTCAAG-ACAAGGAGGGTATCCCGCCAGACC 50545
Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370
|||||||| | || || ||||| ||||| |||| ||| | |||| | || ||||
Sbjct 50546 AGCAGCGTTTGATCTTTGCTGGTAAACAACTGGAGGACGGCAGGACTCTTGCGGACTATA 50605
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|||| || || || ||||||| ||| |||| | | ||||||| ||
Sbjct 50606 ACATCCAGAAGGAGGCGACTCTCCATTTGGTCTTGCGTTTGAGGGGAGG 50654
>seq32633
Length=132462
Score = 91.5 bits (100), Expect = 1e-13
Identities = 150/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||| ||||| || || ||||| ||| | || || || |||
Sbjct 60428 ATGCAGATCTTTGTCAAGACGCTGACTGGGAAGACGATTACCTTGGAGGTAGAGAGCTCC 60369
Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|| | | | || | || || || ||| | ||| |||||||| | || || |||||
Sbjct 60368 GATACTATTGACAACGTGAAGGCAAAGATTCA-GGATAAGGAAGGTATTCCACCAGACCA 60310
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||| | || || || ||||| || ||| |||| || | || | ||||||||
Sbjct 60309 GCAGAGGCTGATTTTTGCTGGTAAGCAGCTGGAGGATGGTCGTACCCTTGCTGATTATAA 60250
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
|||||| || ||||| |||||||| ||||| |||
Sbjct 60249 CATTCAGAAGGAATCAACTCTTCACCTGGTTCTT 60216
>seq50574
Length=377344
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| || || || || ||||| || |||||| | || || || ||
Sbjct 94819 ATGCAGATCTTCGTCAAAACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGAGTTCT 94760
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | ||||| | || ||||||||| || | || || ||||||
Sbjct 94759 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGGATTCCCCCAGACCAG 94700
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | |||||||| || || || ||||||||||| | || | || || |||
Sbjct 94699 CAGAGGCTAATATTTGCAGGAAAGCAGTTGGAAGATGGTCGCACCCTTGCGGACTACAAC 94640
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
||||| || || || || || ||| |||| || || |||||||| ||
Sbjct 94639 ATTCAGAAGGAGTCCACCCTGCATTTGGTGCTGAGGCTGAGGGGAGG 94593
>seq51452
Length=252770
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| || || || || | || || || || ||||| | || ||||| ||
Sbjct 58214 ATGCAAATCTTTGTTAAAACCTTAACGGGAAAGACCATCACATTGGAAGTTGAGAGCTCA 58155
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | || || || ||| ||| || ||||| | ||||| ||||||
Sbjct 58154 GACACGATTGACAATGTGAAGGCGAAGATACAGGATAAAGAAGGTATTCCGCCGGACCAG 58095
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | || || || ||||| ||||||||||| || || ||| || || || ||
Sbjct 58094 CAGAGGCTCATCTTTGCTGGAAAACAGTTGGAGGATGGTAGGACACTGGCGGACTACAAT 58035
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|| || || || || ||||| ||||| || || || ||||||| ||
Sbjct 58034 ATCCAGAAGGAGTCTACTCTCCATCTTGTGCTGAGGTTGAGGGGTGG 57988
>seq48040
Length=167738
Score = 86.0 bits (94), Expect = 6e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 31285 GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGA 31344
||| || |||||| | || || || |||||| | || || || ||||| |||||||||||
Sbjct 54646 GGATAAAGAAGGCATACCTCCTGATCAGCAGAGACTGATTTTTGCTGGGAAACAGTTGGA 54705
Query 31345 AGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||| ||| || ||||| |||||||| |||||||| |||||||| || || |
Sbjct 54706 AGATGGGCGGACCCTGGCTGATTACAACATTCAGAAAGAATCAACTCTTCACCTTGTTTT 54765
Query 31405 TAGACTGAGGGGCGG 31419
|| || ||||| ||
Sbjct 54766 GAGGCTCAGGGGAGG 54780
>seq37995
Length=189229
Score = 82.4 bits (90), Expect = 7e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 31285 GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGA 31344
|||||| ||||| | || || ||||||||| | || || || ||||| |||||||||||
Sbjct 163832 GGACAAAGAAGGGATACCTCCTGACCAGCAGAGGCTGATTTTTGCTGGAAAACAGTTGGA 163891
Query 31345 AGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||| | ||| || ||||| || || || |||||||| || ||||| ||||| |
Sbjct 163892 AGATGGTCGAACTCTGGCTGATTACAATATCCAGAAAGAATCAACACTTCACCTGGTTTT 163951
Query 31405 TAGACTGAGGGGCGG 31419
|| || || || ||
Sbjct 163952 GAGGCTCAGAGGAGG 163966
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445470366533760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |