Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06]
53,128 sequences; 1,222,768,627 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq51452 116 3e-21
seq50758 107 1e-18
seq3636 100 2e-16
seq19192 93.3 3e-14
seq3114 93.3 3e-14
seq32633 91.5 1e-13
seq17618 89.7 4e-13
seq7668 86.0 5e-12
seq50574 84.2 2e-11
>seq51452
Length=252770
Score = 116 bits (128), Expect = 3e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194
|||||||||||||||| | ||||| ||||||||||| || || || ||||| |||||
Sbjct 4293 TGCCACCTCTCAATCTGAGAACTAGGTGAAGGGTGGATTCCTTCTGGATGTTATAATCAG 4352
Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254
|| |||| | ||||||||||| || |||||| | |||| | || ||||| |
Sbjct 4353 CCAGCGTTCTTCCATCTTCTAATTGCTTCCCAGCGAAAATCAGCCTCTGCTGGTCTGGCG 4412
Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314
|| ||||| || || ||||| ||| ||| | || || || || | || |
Sbjct 4413 CGATACCTTCCTTATCTTGGATTTTCGCCTTAACATTATCAATTGTGTCCGAGCTCTCAA 4472
Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
| || || ||||||||||| || || | ||||| ||||| ||||||||
Sbjct 4473 CTTCCAATGTAATGGTTTTCCCGGTTAAGGTTTTAACAAAGATTTGCAT 4521
Score = 107 bits (118), Expect = 1e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194
||||||| ||||| || | ||| | |||||||| || || || || ||||| |||||
Sbjct 58670 TGCCACCCCTCAACCTGAGAACAAGGTGAAGGGTTGATTCCTTCTGGATGTTATAATCAG 58729
Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254
||| |||| | ||||||||||| || ||||| | ||||| | || || || ||
Sbjct 58730 CCAGAGTTCTTCCATCTTCTAATTGCTTCCCAGCAAAAATCAACCTCTGCTGATCAGGTG 58789
Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314
| || || || ||||| |||||| ||| ||| | ||||| || || | || |
Sbjct 58790 GGATACCCTCCTTGTCTTGAATTTTAGACTTAACATTGTCTATCGTGTCCGAGCTCTCAA 58849
Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
| || || || || ||||| || || | || || ||||||||||||||
Sbjct 58850 CTTCCAACGTGATTGTTTTTCCAGTTAAGGTCTTAACAAAAATTTGCAT 58898
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214
|||| || || || || || ||||| || || ||||| ||| | | | | |||||
Sbjct 58918 ACTAGGTGGAGTGTTGACTCCTTTTGAATATTATAATCTGCCAGAGTGCGCCCATCTTCC 58977
Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274
||||| || ||||| | |||| | ||||||||| |||||| ||||| || || |
Sbjct 58978 AATTGCTTCCCAGCAAAAATCAGTCTTTGTTGGTCCGGTGGAATACCTTCCTTATCTTGA 59037
Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334
||||| |||| ||| | || || ||||| | || || || || || || |||||
Sbjct 59038 ATTTTCGTCTTAACATTATCAATAGTATCCGAGCTCTCAACTTCCAACGTGATTGTTTTT 59097
Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || | ||||| || |||||||||||
Sbjct 59098 CCGGTTAATGTTTTAACGAAAATTTGCAT 59126
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
|| || || || || ||||| || |||||||| ||| | | | || || | |||
Sbjct 4547 TGGAGTGTTGACTCCTTTTGAATATTGTAATCAGCGAGAGTCCGTCCATCCTCGAGCTGT 4606
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
|| || || | |||||||||||||| || ||||| ||||| || || ||||||
Sbjct 4607 TTTCCTGCAAAGATCAAACGTTGTTGATCTGGCGGAATACCTTCCTTATCTTGGATTTTG 4666
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
||| ||| | || || || || |||| || || || || || ||||| || |||
Sbjct 4667 GCCTTAACATTATCAATCGTGTCCGAGCTTTCGACTTCCAATGTGATTGTTTTCCCAGTC 4726
Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363
| ||||| ||||||||||||||
Sbjct 4727 AAGGTTTTAACAAAAATTTGCAT 4749
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||| || || || ||||| || |||||||| ||| | | | || || | |||
Sbjct 59152 TGAAGTGTTGACTCCTTTTGAATATTGTAATCTGCGAGAGTATGCCCATCCTCGAGCTGT 59211
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
|| || ||| | |||||||||||||| || |||||| ||||||||||| ||||||
Sbjct 59212 TTTCCTGCGAAGATCAAACGTTGTTGATCTGGTGGAATACCTTCTTTGTCCTGGATTTTG 59271
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
|| ||| | || || || || | | || || || | || | ||| || || |||
Sbjct 59272 GCTTTAACATTGTCGATCGTGTCTGAACTCTCAACTTCGAGAGTTACGGTCTTGCCAGTC 59331
Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363
|| || || ||||| || |||||
Sbjct 59332 AGGGTCTTCACAAAGATCTGCAT 59354
>seq50758
Length=122349
Score = 107 bits (118), Expect = 1e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214
|| || |||||||| || || || || |||||||| ||| ||| |||| |||||||
Sbjct 118016 ACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCTTCG 117957
Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274
| || || || ||| |||||| | || ||||| |||||||||||| ||||| |
Sbjct 117956 AGCTGCTTTCCGGCGAATATCAGCCTCTGCTGGTCCGGTGGAATTCCTTCCTTGTCCTGA 117897
Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334
|| || ||| || | || || || ||| |||| || || | ||| || ||||||
Sbjct 117896 ATCTTCGCCTTAACGTTGTCAATAGTGTCGGAGCTTTCAACCTCAAGGGTGATTGTTTTA 117837
Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || || ||||| ||||| || |||||
Sbjct 117836 CCGGTTAGGGTTTTCACAAAGATCTGCAT 117808
Score = 95.1 bits (104), Expect = 9e-15
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213
||| || |||||||| || || || || ||||||||||| || ||| |||||||
Sbjct 118473 AACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGCGAGGGTTCGGCCGTCTTC 118414
Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273
| ||| || || || | |||| | ||| ||||| |||||| || || |||||
Sbjct 118413 AAGTTGCTTTCCGGCAAAGATCAGCCTTTGCTGGTCTGGTGGAATACCCTCCTTGTCCTG 118354
Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333
||| || ||| || | || || || ||| |||| || || || || ||||||||
Sbjct 118353 AATCTTAGCCTTGACGTTGTCAATTGTGTCGGAGCTTTCCACCTCCAAAGTGATGGTTTT 118294
Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| |||| ||| || |||||||| |||||
Sbjct 118293 CCCAGTCAAAGTCTTCACAAAAATCTGCAT 118264
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214
|| || ||||| || || || || || ||||||||||| ||| | | | |||||
Sbjct 118244 ACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCAGCTAGGGTACGGCCATCTTCC 118185
Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274
|| ||||||||||| | ||||| | || || || ||| ||||| ||||| || |
Sbjct 118184 AACTGTTTGCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCTTTATCCTGA 118125
Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334
|| || ||| || | || || || ||| |||| || || | ||| || |||||
Sbjct 118124 ATCTTCGCCTTAACGTTGTCAATTGTGTCGGAGCTTTCGACTTCAAGGGTGATTGTTTTC 118065
Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || || ||||| ||||| ||||||||
Sbjct 118064 CCGGTTAGGGTTTTGACAAAGATTTGCAT 118036
>seq3636
Length=134301
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||||||||| || ||||| |||||||| ||| ||| | | | || |||| ||
Sbjct 15373 TGAAGGGTGGATTCCTTTTGGATGTTGTAGTCGGCAAGAGTGCGGCCATCCTCTAGCTGC 15314
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
|| ||||| | ||||| | || || ||| || |||||||| ||||| ||| ||
Sbjct 15313 TTTCCAGCAAAGATCAACCTCTGCTGATCGGGAGGGATTCCTTCCTTGTCCTGAATCTTA 15254
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
||| ||| | || || || ||| | | || || || | ||||||||||| || ||
Sbjct 15253 GCCTTGACATTATCAATAGTGTCGGAACTCTCAACCTCGAGAGTAATGGTTTTTCCGGTG 15194
Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363
|| || |||||||| ||||||||
Sbjct 15193 AGCGTCTTTACAAAGATTTGCAT 15171
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||||||||| || || || |||||||| || ||| | | | | ||||| | ||
Sbjct 15601 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTGCGCCCATCTTCAAGCTGC 15542
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
|| ||||| | ||||| | || || || || || ||||| ||||| || ||
Sbjct 15541 TTTCCAGCAAAGATCAACCTCTGCTGATCTGGAGGGATGCCTTCCTTGTCCTGGATCTTC 15482
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
||| ||| | || ||||| ||| | || || || | ||| ||||| || || |||
Sbjct 15481 GCCTTCACATTGTCAATGGTGTCGGAGCTCTCAACCTCAAGGGTGATGGTCTTCCCGGTC 15422
Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363
| |||||||||||||| |||||
Sbjct 15421 AATGTTTTTACAAAAATCTGCAT 15399
>seq19192
Length=430667
Score = 93.3 bits (102), Expect = 3e-14
Identities = 148/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214
|| ||||||||||| || || || || || |||||||| || | || | || ||
Sbjct 373652 ACCAAATGAAGGGTTGATTCCTTCTGAATATTGTAATCTGCAAGGGTCCTTCCATCCTCA 373711
Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274
| |||||| ||||| ||||||| | || ||||| ||||| || || |||||
Sbjct 373712 AGTTGTTTCCCAGCAAATATCAACCTCTGCTGGTCTGGAGGAATACCCTCCTTGTCCTGG 373771
Query 15275 AT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333
|| ||||| ||||||| | || |||||||| | || || || | ||| || || ||
Sbjct 373772 ATCTTTGC-CTTTACATTGTCGATGGTATCTGAGCTCTCAACTTCAAGGGTGATCGTCTT 373830
Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || | |||||| |||||||| |||||
Sbjct 373831 GCCCGTTAAAGTTTTAACAAAAATCTGCAT 373860
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
|| ||||| || || ||||| || |||||||| ||| ||| | ||||| | ||
Sbjct 373886 TGGAGGGTAGACTCCTTTTGAATATTGTAATCAGCAAGAGTTCGGCCATCTTCAAGCTGC 373945
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
|| ||||| | |||| | || ||||| ||||| ||||| ||||| ||||||
Sbjct 373946 TTTCCAGCAAAGATCAGCCTCTGCTGGTCTGGAGGAATCCCTTCCTTGTCTTGAATTTTC 374005
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
||| || | || || || || | | || || || | ||||||||||| || ||
Sbjct 374006 GCCTTCACGTTATCAATTGTGTCTGAACTCTCGACCTCAAGAGTAATGGTTTTGCCAGTA 374065
Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363
|||||||| ||||| || |||||
Sbjct 374066 AGAGTTTTAACAAATATCTGCAT 374088
>seq3114
Length=370656
Score = 93.3 bits (102), Expect = 3e-14
Identities = 147/208 (71%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||||||||| || || || || ||||| || ||| ||| | || || | ||
Sbjct 9881 TGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCTAGTGTTCGGCCATCCTCAAGCTGC 9940
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
|| || ||| | ||||| || || ||||| ||||||||||| ||||| ||| ||
Sbjct 9941 TTACCTGCGAAAATCAACCGCTGCTGGTCTGGAGGAATTCCTTCCTTGTCCTGAATCTTA 10000
Query 15281 CTCTTTACAATTTCTATGGTATCGCTAT-TTTCTACATCTAAGGTAATGGTTTTACCTGT 15339
||| ||| | || ||||| || | || ||||| ||||||||||| || || || ||
Sbjct 10001 GCCTTGACATTGTCAATGGTGTC-CGATGACTCTACCTCTAAGGTAATAGTCTTCCCCGT 10059
Query 15340 CAGAGTTTTTACAAAAATTTGCATATTT 15367
||| || || || || || ||||| |||
Sbjct 10060 CAGGGTCTTCACGAATATCTGCATCTTT 10087
>seq32633
Length=132462
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|| || ||||| | | || ||||| |||||||| ||||| || ||||| |||||
Sbjct 60430 CCTCCCCTCAACCGGAGCACCAAATGGAGGGTGGACTCTTTCTGGATGTTATAATCAGCA 60489
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
||| | ||| | || || | || || ||||| | || ||||| || ||||| |||
Sbjct 60490 AGAGTCCTCCCATCCTCAAGCTGCTTACCAGCAAAAATTAAACGCTGCTGGTCCGGGGGA 60549
Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|| ||||||||||| || |||||| || ||| | || || ||||| | | || ||
Sbjct 60550 ATACCTTCTTTGTCTTGGATCTTTGCT-TTCACATTATCAATTGTATCTGAACTCTCAAC 60608
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| | || || || || || |||| || || ||||| || ||||||
Sbjct 60609 TTCCAGCGTGATTGTCTTCCCAGTCAACGTCTTCACAAAGATCTGCATA 60657
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
||||| |||| || | || | ||| || ||||| || || || || ||||| ||
Sbjct 60886 CCACCCCTCAGCCTCAGCACCAGATGCAGAGTGGATTCCTTCTGAATATTGTAGTCAGCA 60945
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
||| | | | || || | ||| || ||||| | ||||| | || || || |||
Sbjct 60946 AGAGTACGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGAGGA 61005
Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|| |||||||| || ||||| ||| || ||| | || || |||||| | | || ||
Sbjct 61006 ATGCCTTCTTTATCCTGGATTTTAGCT-TTGACATTGTCAATTGTATCGGAACTCTCAAC 61064
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| | |||||| || || ||||||| |||||||||||| || ||||||
Sbjct 61065 CTCAAGGGTAATAGTCTTTCCTGTCAAAGTTTTTACAAAGATCTGCATA 61113
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
||||| |||| | | || ||||| ||||| || || ||||| ||||||||||| |
Sbjct 60658 CCACCCCTCAGGCGCAGCACCAAATGGAGGGTTGATTCCTTTTGGATGTTGTAATCAGCT 60717
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| | || | || || | || || ||||| | || | | || ||||| ||||
Sbjct 60718 AGTGTCCTTCCATCCTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCAGGTGGA 60777
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| || || |||||| ||| ||| | || ||||| || | || ||
Sbjct 60778 ATCCCTTCCTTATCTTGAATTTTTGCCTTAACATTGTCGATGGTGTCCGAGCTCTCAACT 60837
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| | ||||| ||||| || |||| ||||| ||||| |||||||||
Sbjct 60838 TCAAGAGTAATAGTTTTCCCAGTCAAGGTTTTCACAAAGATTTGCATA 60885
Score = 84.2 bits (92), Expect = 2e-11
Identities = 143/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219
||| ||||| || || ||||| || ||||| || ||| ||| | || ||||| ||
Sbjct 61365 ATGGAGGGTAGACTCCTTTTGGATATTGTAGTCAGCAAGAGTTCGGCCATCCTCTAACTG 61424
Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAAT-TT 15278
|| ||||| | ||||| | ||| || || ||||||||||| || || || ||
Sbjct 61425 CTTTCCAGCAAAGATCAACCTTTGCTGATCTGGAGGAATTCCTTCCTTATCTTGGATCTT 61484
Query 15279 TGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTG 15338
||| ||| ||| | || || || || | | || || || | || |||||||| || |
Sbjct 61485 TGC-CTTAACATTGTCGATAGTGTCTGAACTCTCAACCTCGAGAGTGATGGTTTTGCCAG 61543
Query 15339 TCAGAGTTTTTACAAAAATTTGCAT 15363
| || || |||||||| ||||||||
Sbjct 61544 TGAGGGTCTTTACAAAGATTTGCAT 61568
>seq17618
Length=194525
Score = 89.7 bits (98), Expect = 4e-13
Identities = 144/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219
|||||| || || || || || |||||||||||| ||| ||| ||||||| | ||
Sbjct 71841 ATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGCTAGGGTTCGGCCGTCTTCAAGCTG 71900
Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279
|| || ||| | |||| ||| || || || ||||| ||||| ||||| || ||
Sbjct 71901 CTTTCCGGCGAAAATCAGACGCTGCTGATCTGGGGGAATCCCTTCCTTGTCTTGGATCTT 71960
Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339
| || ||| | || || || ||| | ||| || || | ||| || |||||||| ||
Sbjct 71961 GGCTTTCACATTGTCGATTGTGTCGGAAGATTCAACCTCAAGGGTGATTGTTTTACCCGT 72020
Query 15340 CAGAGTTTTTACAAAAATTTGCATATT 15366
|| ||||| || || || ||||| ||
Sbjct 72021 TAGGGTTTTCACGAAGATCTGCATCTT 72047
>seq7668
Length=316181
Score = 86.0 bits (94), Expect = 5e-12
Identities = 143/207 (69%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219
|||||| || || || || || |||||||||||| ||| ||| |||||| | ||
Sbjct 198722 ATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGCTAGGGTTCGGCCGTCTTTAAGCTG 198663
Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279
|| || ||| | |||| ||| || || || ||||| ||||| ||||| || ||
Sbjct 198662 CTTTCCGGCGAAAATCAGACGCTGCTGATCTGGGGGAATCCCTTCCTTGTCTTGGATCTT 198603
Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339
| || ||| | || || || ||| | ||| || || | ||| || |||||||| ||
Sbjct 198602 GGATTTCACATTGTCGATTGTGTCGGAAGATTCAACCTCAAGGGTGATTGTTTTACCCGT 198543
Query 15340 CAGAGTTTTTACAAAAATTTGCATATT 15366
|| ||||| || || || ||||| ||
Sbjct 198542 TAGGGTTTTCACGAAGATCTGCATCTT 198516
>seq50574
Length=377344
Score = 84.2 bits (92), Expect = 2e-11
Identities = 153/224 (68%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214
|| || |||||||| || || || || |||||||||||| ||| | | |||| ||
Sbjct 95067 ACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCGGCGAGAGTACGGCCGTCCTCA 95126
Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274
| || ||||| ||| | || | | ||| || || ||||||||||| |||||
Sbjct 95127 AGCTGCTTGCCGGCGAAGATAAGCCTTTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGG 95186
Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334
|||||| ||||| | || || || ||| | | || || || | || ||||| ||
Sbjct 95187 ATTTTGGCTTTTACGTTGTCGATTGTGTCGGAACTCTCGACCTCGAGAGTGATGGTCTTT 95246
Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAATAAAAT 15378
|| || || ||||| || || || ||||| | | || ||| |||
Sbjct 95247 CCGGTAAGGGTTTTCACGAAGATCTGCATCTGTAAATATATAAT 95290
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
|||||||| || || || || ||||||||||| || | | | || || | ||
Sbjct 94845 TGAAGGGTAGATTCCTTCTGGATGTTGTAATCTGCGAGCGTACGGCCATCCTCCAGCTGC 94904
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
||||| ||| | ||||| | || ||||| ||||||||| || || || |||||||
Sbjct 94905 TTGCCGGCGAAGATCAACCTCTGCTGGTCTGGTGGAATTCCCTCCTTATCCTGAATTTTG 94964
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
||| ||| | || ||||| || | | || || || | ||| || ||||| || ||
Sbjct 94965 GCCTTGACATTATCGATGGTGTCAGAACTCTCGACCTCAAGGGTGATTGTTTTGCCGGTG 95024
Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363
|| ||||| || || || |||||
Sbjct 95025 AGGGTTTTGACGAAGATCTGCAT 95047
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361944689873448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |