Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06] 53,128 sequences; 1,222,768,627 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq44697 129 6e-25 seq38302 114 1e-20 >seq44697 Length=182102 Score = 129 bits (142), Expect = 6e-25 Identities = 126/160 (79%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 21472 CAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGT 21531 |||||| ||||||||||| ||||||||||| |||||| ||||| || || || || || Sbjct 113267 CAAACAAGCAAAATCACAGTGCAAACCTTCGTCCCTAGAAATTAACTCGTTCGAGAAGGT 113326 Query 21532 TAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGC-TCCTGAAA 21590 ||| || |||||||| || | |||||||||||| ||||| | | |||| || ||| || | Sbjct 113327 TAATCCAGGCATTAACCCCCGCTTTTTTAACCAGAATATAG-CACAAAAGCTTCCGGAGA 113385 Query 21591 AGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTC 21630 | ||||| || || || |||||||||||| || || || Sbjct 113386 AAAAAATACCTTCCACACAAGCAAATGCAACCAAACGCTC 113425 >seq38302 Length=59671 Score = 114 bits (126), Expect = 1e-20 Identities = 123/160 (77%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 21472 CAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGT 21531 |||||| || |||||||| ||||||||||| ||||| ||||| || || || || || Sbjct 23087 CAAACAAGCGAAATCACAGTGCAAACCTTCGTCCCTTGAAATTAACTCGTTCGAGAAAGT 23146 Query 21532 TAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGC-TCCTGAAA 21590 ||| || |||||||| || | |||||||||||| ||||| | | |||| || ||| || | Sbjct 23147 TAATCCAGGCATTAACCCCCGCTTTTTTAACCAGAATATAG-CACAAAAGCTTCCAGAGA 23205 Query 21591 AGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTC 21630 | ||||| || || || || ||||||||| || || || Sbjct 23206 AAAAAATACCTTCCACACAAGAAAATGCAACCAAACGCTC 23245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531547564678720