Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06]
53,128 sequences; 1,222,768,627 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq17618 136 9e-27
seq51452 134 3e-26
seq49251 132 1e-25
seq19192 127 5e-24
seq3636 127 5e-24
seq50574 125 2e-23
seq7668 123 6e-23
seq32633 118 2e-21
seq3114 118 2e-21
seq50758 116 9e-21
seq33627 109 1e-18
seq10975 100 7e-16
seq48356 91.5 3e-13
seq9134 89.7 1e-12
>seq17618
Length=194525
Score = 136 bits (150), Expect = 9e-27
Identities = 169/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || |||||||||| || || || ||||| || || |||||
Sbjct 71818 CCACCACGGAGACGGAGCACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGCT 71877
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || |||||||| | || ||||| ||||| ||||||||||| || |||||||
Sbjct 71878 AGGGTTCGGCCGTCTTCAAGCTGCTTTCCGGCGAAAATCAGACGCTGCTG---ATCTGGG 71934
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| ||||| || || ||||| || |||||||| || || || | ||| |||||
Sbjct 71935 GGAATCCCTTCCTTGTCTTGGATCTTGGCTTTCACATTGTCGATTGTGTCGGAAGATTCA 71994
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||| || || || || || || || ||||| ||||||||
Sbjct 71995 ACCTCAAGGGTGATTGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 72044
>seq51452
Length=252770
Score = 134 bits (148), Expect = 3e-26
Identities = 169/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| ||||| | ||| || || |||| || || ||||| ||||| || || ||
Sbjct 59127 TCCACCACGGAGGCGAAGAACAAGGTGAAGTGTTGACTCCTTTTGAATATTGTAATCTGC 59186
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
||| || | || || || | ||||||||||||||||||| ||| |||||| |||
Sbjct 59187 GAGAGTATGCCCATCCTCGAGCTGTTTTCCTGCGAAGATCAAACGTTGTTGATCTGGTGG 59246
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT-- 288423
|| |||||||| ||||||||||| ||||| || || || || | | || | |||
Sbjct 59247 AATACCTTCTTTGTCCTGGATTTTGGCTTTAACATTGTCGATCG--TGTCTGAACTCTCA 59304
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|||||||| || | ||||| || ||||| ||||| || || ||||||||
Sbjct 59305 ACTTCGAGAGTTACGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 59354
Score = 129 bits (142), Expect = 1e-24
Identities = 168/231 (73%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| | || || || || || |||| ||| ||| ||||| |||||||| || ||
Sbjct 58443 TCCACCCCTTAGCCTGAGAACAAGGTGAAGGGTGGATTCCTTTTGAATATTATAATCTGC 58502
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
||| || | ||| ||||| |||||||| ||||| || ||||| | ||| || |||
Sbjct 58503 GAGAGTCCTTCCATCTTCCAATTGTTTCCCTGCAAAAATCAGTCTCTGCTGGTCTGGTGG 58562
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTC 288422
||| || || |||||||| || || || ||||| || || || | ||| ||| ||
Sbjct 58563 GATACCCTCCTTATCCTGTATCTTGGCCTTCACATTGTCAATGGTATCAGAACTC---TC 58619
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || | ||||||||||||||| |||| ||||| || || | ||||||
Sbjct 58620 CACCTCCAACGTGATCGTCTTCCCCGTCAACGTCTTCACAAAGACCTGCAT 58670
Score = 116 bits (128), Expect = 9e-21
Identities = 165/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| || || | ||| || || || | || || ||||| || |||||||| ||
Sbjct 4066 TCCACCACGAAGGCGAAGGACTAGGTGGAGTGTTGACTCCTTTTGAATGTTATAGTCAGC 4125
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
|| || | || ||||| |||||||| ||||| || ||||| | ||| || |||
Sbjct 4126 AAGAGTCCTCCCATCTTCCAATTGTTTCCCTGCAAAAATCAGTCTCTGCTGGTCTGGTGG 4185
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTC 288422
||| || || |||||||| || || || ||||| || || || | ||| ||| ||
Sbjct 4186 GATACCCTCCTTATCCTGTATCTTGGCCTTCACATTGTCAATGGTATCAGAACTC---TC 4242
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| | ||||||||||||||| || | ||||| || || ||||||||
Sbjct 4243 CACTTCCAACGTGATCGTCTTCCCCGTTAACGTCTTCACAAAGATCTGCAT 4293
Score = 114 bits (126), Expect = 3e-20
Identities = 171/239 (72%), Gaps = 13/239 (5%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| | | ||| || || || |||| ||| ||| || ||||| ||||| |
Sbjct 4291 CATG-CCACCTCTCAATCTGAGAACTAGGTGAAGGGTGGATTCCTTCTGGATGTTATAAT 4349
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| || ||||| | ||| ||||||||||| || || ||||| ||||| | ||| || |
Sbjct 4350 CAGCCAGCGTTCTTCCATCTTCTAATTGCTTCCCAGCGAAAATCAGCCTCTGCTG---GT 4406
Query 288362 CTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415
|||| ||| ||||| ||||| ||||||||||| || || || || || | || ||
Sbjct 4407 CTGGCGCGATACCTTCCTTATCTTGGATTTTCGCCTTAACATTATCAATTGTGTCCGAGC 4466
Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| || ||||| | || || || |||||||| | || || || || || ||||||
Sbjct 4467 TC---TCAACTTCCAATGTAATGGTTTTCCCGGTTAAGGTTTTAACAAAGATTTGCATT 4522
Score = 114 bits (126), Expect = 3e-20
Identities = 168/235 (71%), Gaps = 12/235 (5%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| ||||| | ||| || || || | || || ||||| ||||| || || ||
Sbjct 4522 TCCACCACGGAGACGAAGAACAAGGTGGAGTGTTGACTCCTTTTGAATATTGTAATCAGC 4581
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT-- 288363
||| || ||||| || || | ||||||||||| ||||||| ||| ||||| ||||
Sbjct 4582 GAGAGTCCGTCCATCCTCGAGCTGTTTTCCTGCAAAGATCAAACGTTGTTG---ATCTGG 4638
Query 288364 -GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGA 288419
|| || ||||| ||||| |||||||| || || || || || || | || |||
Sbjct 4639 CGGAATACCTTCCTTATCTTGGATTTTGGCCTTAACATTATCAATCGTGTCCGAGCT--- 4695
Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
||| ||||| | ||||| || ||||| |||| || || || || || ||||||
Sbjct 4696 TTCGACTTCCAATGTGATTGTTTTCCCAGTCAAGGTTTTAACAAAAATTTGCATT 4750
Score = 89.7 bits (98), Expect = 1e-12
Identities = 152/219 (69%), Gaps = 6/219 (3%)
Strand=Plus/Plus
Query 288259 CTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCG 288318
|| || || || |||| || ||| || ||||| ||||| || || || || | |||
Sbjct 58684 CTGAGAACAAGGTGAAGGGTTGATTCCTTCTGGATGTTATAATCAGCCAGAGTTCTTCCA 58743
Query 288319 TCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTA 288378
||||||||||| || || || || |||| | ||| ||| | |||||| || || ||
Sbjct 58744 TCTTCTAATTGCTTCCCAGCAAAAATCAACCTCTGCTGATCAGGTGGGATACCCTCCTTG 58803
Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTG 288435
|| || ||||| | || || || ||||| | || |||| || ||||| | ||||
Sbjct 58804 TCTTGAATTTTAGACTTAACATTGTCTATCGTGTCCGAGCTC---TCAACTTCCAACGTG 58860
Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| || || || || | ||||| || || || ||||||
Sbjct 58861 ATTGTTTTTCCAGTTAAGGTCTTAACAAAAATTTGCATT 58899
Score = 87.8 bits (96), Expect = 4e-12
Identities = 137/195 (70%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || |||||||| ||||| || || || | || || || || |||||||| || |||
Sbjct 58024 TCCTTCTGGATATTGTAGTCCGCCAGTGTCCTACCATCCTCCAACTGTTTTCCAGCAAAG 58083
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| || || || |||||||||||||| || ||||| ||||| ||
Sbjct 58084 ATGAGCCTCTGCTGGTCCGGCGGAATACCTTCTTTATCCTGTATCTTCGCCTTCACATTG 58143
Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || | || |||| || ||||| | ||||| ||||| || || | || ||
Sbjct 58144 TCAATCGTGTCTGAGCTC---TCAACTTCCAATGTGATGGTCTTTCCCGTTAAGGTTTTA 58200
Query 288460 ACGAATATCTGCATT 288474
|| || || ||||||
Sbjct 58201 ACAAAGATTTGCATT 58215
>seq49251
Length=53185
Score = 132 bits (146), Expect = 1e-25
Identities = 168/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || |||||||||| || ||| || ||||| || || |||||
Sbjct 47152 CCACCACGGAGACGGAGCACGAGATGAAGAGTCGATTCCTTCTGGATGTTGTAATCGGCT 47211
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || |||||||| | || ||||| |||| ||||||||||| || |||||||
Sbjct 47212 AGGGTTCGGCCGTCTTCAAGCTGCTTTCCGCCGAAAATCAGACGCTGCTG---ATCTGGG 47268
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| ||||| || || ||||| || |||||||| || || || | ||| |||||
Sbjct 47269 GGAATCCCTTCCTTGTCTTGGATCTTGGCTTTCACATTGTCGATTGTGTCGGAAGATTCA 47328
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||| || || || | || || || ||||| ||||||||
Sbjct 47329 ACCTCAAGGGTGATTGTTTTACCCGCTAGGGTTTTCACGAAGATCTGCAT 47378
>seq19192
Length=430667
Score = 127 bits (140), Expect = 5e-24
Identities = 167/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | ||| || || || | ||| ||| ||||||||||| || || ||
Sbjct 373178 CCACCACGAAGGCGAAGCACAAGGTGGAGTGTGGATTCCTTTTGGATATTGTAATCTGCA 373237
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || | || || || || || || || | ||| ||| ||||
Sbjct 373238 AGGGTGCGCCCATCCTCCAGCTGCTTACCAGCAAATATGAGCCTCTGCTGATCTGGTGGG 373297
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|| |||||||| ||||| ||||| || |||||||| || |||| || |||| ||
Sbjct 373298 ATCCCTTCTTTGTCCTGAATTTTGGCCTTCACGTTGTCAATAGTGTCAGAGCTC---TCC 373354
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| | ||||| |||||||| |||| ||| || || |||||||||||
Sbjct 373355 ACTTCCAAAGTGATGGTCTTCCCTGTCAAAGTTTTAACAAATATCTGCAT 373404
Score = 87.8 bits (96), Expect = 4e-12
Identities = 139/196 (71%), Gaps = 10/196 (5%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| ||||| ||||| || || || || || || || ||||| | || ||||| || |||
Sbjct 373898 TCCTTTTGAATATTGTAATCAGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAG 373957
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||| | ||| || ||||| || ||||| || || || |||||||| ||||||
Sbjct 373958 ATCAGCCTCTGCTGG---TCTGGAGGAATCCCTTCCTTGTCTTGAATTTTCGCCTTCACG 374014
Query 288400 TTTTCTATAGAATCGCTCGATTCT--ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCT 288457
|| || || | || | | ||| || || || || || || || || || ||||| |
Sbjct 374015 TTATCAATTGTGTC--TGAACTCTCGACCTCAAGAGTAATGGTTTTGCCAGTAAGAGTTT 374072
Query 288458 TGACGAATATCTGCAT 288473
| || |||||||||||
Sbjct 374073 TAACAAATATCTGCAT 374088
Score = 86.0 bits (94), Expect = 1e-11
Identities = 164/238 (69%), Gaps = 13/238 (5%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| || || | ||| | ||| || | ||||| || ||| || || ||||| || |
Sbjct 373630 CATG-CCTCCCCTGAGACGAAGCACCAAATGAAGGGTTGATTCCTTCTGAATATTGTAAT 373688
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| || || || | ||| || || | |||||| || || || |||| | ||| || |
Sbjct 373689 CTGCAAGGGTCCTTCCATCCTCAAGTTGTTTCCCAGCAAATATCAACCTCTGCTGG---T 373745
Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415
|||| || || || || |||||||| || || || || || || || | ||| ||
Sbjct 373746 CTGGAGGAATACCCTCCTTGTCCTGGATCTTTGCCTTTACATTGTCGATGGTATCTGAGC 373805
Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| || ||||||||||| || || | ||| || || || ||||||||
Sbjct 373806 TC---TCAACTTCAAGGGTGATCGTCTTGCCCGTTAAAGTTTTAACAAAAATCTGCAT 373860
>seq3636
Length=134301
Score = 127 bits (140), Expect = 5e-24
Identities = 167/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || || |||| ||| |||||| ||||| ||||| || ||
Sbjct 16309 CCACCACGGAGACGAAGCACAAGGTGAAGGGTGGATTCTTTCTGGATGTTATAATCAGCA 16250
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || || || | || || || || || |||| | ||| ||| |||
Sbjct 16249 AGGGTACGACCATCCTCCAGCTGCTTACCAGCAAAAATCAACCTCTGCTGATCTGGTGGA 16190
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|| || || || ||||| || || ||||||||||| || |||| ||| |||| ||
Sbjct 16189 ATACCCTCCTTGTCCTGAATCTTTGCTTTCACGTTATCAATAGTATCAGAGCTC---TCC 16133
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || | ||||| |||||||| || ||||||||||| |||||||||||
Sbjct 16132 ACCTCCAAAGTGATAGTCTTCCCAGTTAGAGTCTTGACAAATATCTGCAT 16083
Score = 116 bits (128), Expect = 9e-21
Identities = 167/233 (72%), Gaps = 12/233 (5%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || || || |||| ||| || || ||||| || ||||| ||
Sbjct 15625 CCACCACGCAGACGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 15566
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365
|| ||||| || ||||| | || ||||| || ||||||| | ||| ||| |||||
Sbjct 15565 AGAGTGCGCCCATCTTCAAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGA---TCTGGA 15509
Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420
||| ||||| || |||||||| ||||| ||||| || || || | ||| |||
Sbjct 15508 GGGATGCCTTCCTTGTCCTGGATCTTCGCCTTCACATTGTCAATGGTGTCGGAGCTC--- 15452
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||| ||||||||||||| || || || || ||||||||
Sbjct 15451 TCAACCTCAAGGGTGATGGTCTTCCCGGTCAATGTTTTTACAAAAATCTGCAT 15399
Score = 114 bits (126), Expect = 3e-20
Identities = 164/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || || || |||| ||| ||| |||||||| || ||||||||
Sbjct 15397 CCACCACGTAGACGGAGGACAAGGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCGGCA 15338
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || |||| || ||||| || ||||||| | ||| ||| |||
Sbjct 15337 AGAGTGCGGCCATCCTCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCGGGAGGG 15278
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423
|||||||| || ||||| || || || || || || || |||| ||| ||| ||
Sbjct 15277 ATTCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCAATAGTGTCGGAACTC---TCA 15221
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| || || || || ||||| || ||||| || || || |||||
Sbjct 15220 ACCTCGAGAGTAATGGTTTTTCCGGTGAGCGTCTTTACAAAGATTTGCAT 15171
Score = 107 bits (118), Expect = 5e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321
|| || | ||| | |||| ||||| |||||||| || || || || || | || ||
Sbjct 16066 AGCACCAAATGCAACGTGGACTCTTTCTGGATATTGTAATCAGCAAGGGTCCTCCCATCC 16007
Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381
|| | || || || || ||||||| ||||| ||| ||| || |||||||||||
Sbjct 16006 TCAAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATCTGGTGGAATCCCTTCTTTATCT 15947
Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441
||||| ||||| || ||||| || || | ||| ||| || || | |||||||||
Sbjct 15946 TGGATCTTCGCCTTTACGTTATCAATTGTATCAGAACTTTCGACCTCCAAGGTGATCGTC 15887
Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| |||| ||||| || || ||||||||
Sbjct 15886 TTCCCTGTCAATGTCTTCACAAAGATCTGCAT 15855
>seq50574
Length=377344
Score = 125 bits (138), Expect = 2e-23
Identities = 169/233 (73%), Gaps = 12/233 (5%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || | |||| || ||| || ||||| || || ||||||
Sbjct 95049 CCACCACGGAGACGGAGGACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCGGCG 95108
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || ||||| || | || || || |||||||| || | || ||| ||||||
Sbjct 95109 AGAGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATAAGCCTTTGCTGA---TCTGGG 95165
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420
|||||||| || ||||||||||| ||||| ||||| || || | ||| |||
Sbjct 95166 GGAATTCCTTCCTTGTCCTGGATTTTGGCTTTTACGTTGTCGATTGTGTCGGAACTC--- 95222
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| ||||| ||||| ||||| || || || ||||| ||||||||
Sbjct 95223 TCGACCTCGAGAGTGATGGTCTTTCCGGTAAGGGTTTTCACGAAGATCTGCAT 95275
>seq7668
Length=316181
Score = 123 bits (136), Expect = 6e-23
Identities = 166/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|||| ||||| | || |||||||||| || || || ||||| || || |||||
Sbjct 198745 CCACTACGGAGACGGAGCACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGCT 198686
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || ||||||| | || ||||| ||||| ||||||||||| || |||||||
Sbjct 198685 AGGGTTCGGCCGTCTTTAAGCTGCTTTCCGGCGAAAATCAGACGCTGCTG---ATCTGGG 198629
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| ||||| || || ||||| || | |||||| || || || | ||| |||||
Sbjct 198628 GGAATCCCTTCCTTGTCTTGGATCTTGGATTTCACATTGTCGATTGTGTCGGAAGATTCA 198569
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||| || || || || || || || ||||| ||||||||
Sbjct 198568 ACCTCAAGGGTGATTGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 198519
>seq32633
Length=132462
Score = 118 bits (130), Expect = 2e-21
Identities = 165/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || || |||| || ||| || || || ||||| || ||
Sbjct 60202 CCACCACGGAGGCGAAGAACCAGGTGAAGAGTTGATTCCTTCTGAATGTTATAATCAGCA 60261
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || || || | || || || || || ||||| | ||| || |||
Sbjct 60262 AGGGTACGACCATCCTCCAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGA 60321
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423
|| ||||| |||||||| || || || |||||||| || |||| |||| ||| |||
Sbjct 60322 ATACCTTCCTTATCCTGAATCTTTGCCTTCACGTTGTCAATAGTATCGGAGCTC---TCT 60378
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || | || ||||||||||| ||||| |||||||| || ||||||||
Sbjct 60379 ACCTCCAAGGTAATCGTCTTCCCAGTCAGCGTCTTGACAAAGATCTGCAT 60428
Score = 116 bits (128), Expect = 9e-21
Identities = 167/233 (72%), Gaps = 12/233 (5%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | || || || || ||||| | ||| ||| || || ||||| ||||| ||
Sbjct 60886 CCACCCCTCAGCCTCAGCACCAGATGCAGAGTGGATTCCTTCTGAATATTGTAGTCAGCA 60945
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || || || | ||| ||||| || ||||||| | ||| ||| |||||
Sbjct 60946 AGAGTACGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGA---TCTGGA 61002
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420
|| |||||||||||||||||||| ||||| || || || || | |||| |||
Sbjct 61003 GGAATGCCTTCTTTATCCTGGATTTTAGCTTTGACATTGTCAATTGTATCGGAACTC--- 61059
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || || || ||||| || |||| ||| || || || ||||||||
Sbjct 61060 TCAACCTCAAGGGTAATAGTCTTTCCTGTCAAAGTTTTTACAAAGATCTGCAT 61112
Score = 104 bits (114), Expect = 6e-17
Identities = 166/232 (72%), Gaps = 10/232 (4%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | ||| || ||||| | || || ||||||||||| ||||| ||
Sbjct 61342 CCACCACGCAGACGAAGGACAAGATGGAGGGTAGACTCCTTTTGGATATTGTAGTCAGCA 61401
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363
|| || || || || ||||| || ||||| || ||||||| || || ||| ||||
Sbjct 61402 AGAGTTCGGCCATCCTCTAACTGCTTTCCAGCAAAGATCA-AC-CT-TTGCTGATCTGGA 61458
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| |||||||| ||||| ||||| || || || || || || |||| | || | |||
Sbjct 61459 GGAATTCCTTCCTTATCTTGGATCTTTGCCTTAACATTGTCGATAG--TGTCTGAACTCT 61516
Query 288424 --ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| ||||| || || || || || ||||| || || || |||||
Sbjct 61517 CAACCTCGAGAGTGATGGTTTTGCCAGTGAGGGTCTTTACAAAGATTTGCAT 61568
>seq3114
Length=370656
Score = 118 bits (130), Expect = 2e-21
Identities = 165/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || || |||| ||| || || |||||||| ||||| ||
Sbjct 9857 CCACCACGGAGGCGAAGGACAAGGTGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCT 9916
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || || || | || || |||||||| |||| ||||| || |||||
Sbjct 9917 AGTGTTCGGCCATCCTCAAGCTGCTTACCTGCGAAAATCAACCGCTGCTGG---TCTGGA 9973
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|||||||| || ||||| || || || || || || || || | || || |||
Sbjct 9974 GGAATTCCTTCCTTGTCCTGAATCTTAGCCTTGACATTGTCAATGGTGTCCGATGACTCT 10033
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || | || || |||||||| ||||| ||||| ||||||||||||||
Sbjct 10034 ACCTCTAAGGTAATAGTCTTCCCCGTCAGGGTCTTCACGAATATCTGCAT 10083
>seq50758
Length=122349
Score = 116 bits (128), Expect = 9e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || || | |||| ||| ||| || ||||||||||| || ||
Sbjct 118718 CCACCACGAAGACGGAGCACCAAGTGAAGTGTGGATTCCTTCTGGATATTATAATCAGCT 118659
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || | || ||||| || || || || || ||||||| | ||| || ||||
Sbjct 118658 AAAGTTCTCCCATCTTCCAACTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGGG 118599
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || ||||| || ||||| || || || || |||| |||| ||| |||
Sbjct 118598 ATACCCTCCTTGTCCTGAATCTTCGCCTTAACATTGTCAATAGTATCGGAGCTTTCGACT 118539
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| |||||||| || || || |||||||| ||||||||
Sbjct 118538 TCGAGGGTGATAGTCTTCCCAGTGAGTGTTTTGACGAAGATCTGCAT 118492
Score = 111 bits (122), Expect = 4e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || || || || || || || || || || ||||| || ||||| || || |||
Sbjct 118226 TCCTTCTGAATGTTGTAATCAGCTAGGGTACGGCCATCTTCCAACTGTTTGCCAGCAAAG 118167
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||| | ||| ||| ||||||||| ||||||||||| || ||||| || |||||
Sbjct 118166 ATCAACCTCTGCTGATCTGGTGGGATTCCCTCTTTATCCTGAATCTTCGCCTTAACGTTG 118107
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||| ||| ||||| || ||||| || |||||||| || || |||||
Sbjct 118106 TCAATTGTGTCGGAGCTTTCGACTTCAAGGGTGATTGTTTTCCCGGTTAGGGTTTTGACA 118047
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 118046 AAGATTTGCAT 118036
>seq33627
Length=115891
Score = 109 bits (120), Expect = 1e-18
Identities = 172/244 (70%), Gaps = 12/244 (5%)
Strand=Plus/Minus
Query 288235 ATTCATACATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATA 288294
||||| | | |||||||||||| || || |||||||||| || || ||||||
Sbjct 50892 ATTCAGAAGTCTCCACCGCGGAGCCTGAGCACGAGATGAAGAGTAGACTC----TGGATA 50837
Query 288295 TTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGT 288354
|| ||||| || |||||||| || || || | || || || || ||||| || | |||
Sbjct 50836 TTGTAGTCTGCAAGCGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGC 50777
Query 288355 TGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTC--ACGTTTTCTATAGAAT 288412
||| ||| || ||||| |||||||| || || || ||| | || || || | ||
Sbjct 50776 TGATCTGGTGGAATGCCTTCCTTATCCTGTATCTTTGCCTTCAAAAATTGTCCATGGTAT 50717
Query 288413 C---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCT 288469
| |||| || || || | ||||| |||||||| |||| ||||| || || ||||
Sbjct 50716 CTGAGCTC---TCCACCTCCAAGGTGATTGTCTTCCCAGTCAATGTCTTCACAAAGATCT 50660
Query 288470 GCAT 288473
||||
Sbjct 50659 GCAT 50656
>seq10975
Length=265031
Score = 100 bits (110), Expect = 7e-16
Identities = 87/108 (81%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429
|||||||| || || || || ||||| || || || || | ||||||||||| || |||
Sbjct 83496 CCTTCTTTGTCTTGAATCTTAGCTTTGACATTGTCAATGGTGTCGCTCGATTCAACCTCG 83555
Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477
|||||||| ||||||||||| || || || ||||| ||||||||| ||
Sbjct 83556 AGCGTGATTGTCTTCCCGGTTAGGGTTTTCACGAAGATCTGCATTTTG 83603
>seq48356
Length=183133
Score = 91.5 bits (100), Expect = 3e-13
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429
|||||||| || || ||||| ||||| || || || || | ||| || ||||| ||||||
Sbjct 106515 CCTTCTTTGTCTTGTATTTTGGCTTTAACATTGTCGATTGTATCACTGGATTCAACTTCG 106456
Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| || || || || || || ||||| || |||||||||||||||
Sbjct 106455 AGAGTTATGGTTTTACCAGTGAGAGTTTTCACGAATATCTGCATT 106411
>seq9134
Length=246095
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429
||||| || ||||| || || || || || || || || | |||||||||||| |||||
Sbjct 90913 CCTTCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATGGTATCGCTCGATTCGACTTCA 90972
Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| |||||||| || || || || ||||| ||||||||
Sbjct 90973 AGGGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAAATCTGCAT 91016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178851406300784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |