Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06] 53,128 sequences; 1,222,768,627 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq17618 136 9e-27 seq51452 134 3e-26 seq49251 132 1e-25 seq19192 127 5e-24 seq3636 127 5e-24 seq50574 125 2e-23 seq7668 123 6e-23 seq32633 118 2e-21 seq3114 118 2e-21 seq50758 116 9e-21 seq33627 109 1e-18 seq10975 100 7e-16 seq48356 91.5 3e-13 seq9134 89.7 1e-12 >seq17618 Length=194525 Score = 136 bits (150), Expect = 9e-27 Identities = 169/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || |||||||||| || || || ||||| || || ||||| Sbjct 71818 CCACCACGGAGACGGAGCACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGCT 71877 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | || ||||| ||||| ||||||||||| || ||||||| Sbjct 71878 AGGGTTCGGCCGTCTTCAAGCTGCTTTCCGGCGAAAATCAGACGCTGCTG---ATCTGGG 71934 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||| || || ||||| || |||||||| || || || | ||| ||||| Sbjct 71935 GGAATCCCTTCCTTGTCTTGGATCTTGGCTTTCACATTGTCGATTGTGTCGGAAGATTCA 71994 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| || || || || || || || ||||| |||||||| Sbjct 71995 ACCTCAAGGGTGATTGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 72044 >seq51452 Length=252770 Score = 134 bits (148), Expect = 3e-26 Identities = 169/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | ||| || || |||| || || ||||| ||||| || || || Sbjct 59127 TCCACCACGGAGGCGAAGAACAAGGTGAAGTGTTGACTCCTTTTGAATATTGTAATCTGC 59186 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || | || || || | ||||||||||||||||||| ||| |||||| ||| Sbjct 59187 GAGAGTATGCCCATCCTCGAGCTGTTTTCCTGCGAAGATCAAACGTTGTTGATCTGGTGG 59246 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT-- 288423 || |||||||| ||||||||||| ||||| || || || || | | || | ||| Sbjct 59247 AATACCTTCTTTGTCCTGGATTTTGGCTTTAACATTGTCGATCG--TGTCTGAACTCTCA 59304 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| || | ||||| || ||||| ||||| || || |||||||| Sbjct 59305 ACTTCGAGAGTTACGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 59354 Score = 129 bits (142), Expect = 1e-24 Identities = 168/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | || || || || || |||| ||| ||| ||||| |||||||| || || Sbjct 58443 TCCACCCCTTAGCCTGAGAACAAGGTGAAGGGTGGATTCCTTTTGAATATTATAATCTGC 58502 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || | ||| ||||| |||||||| ||||| || ||||| | ||| || ||| Sbjct 58503 GAGAGTCCTTCCATCTTCCAATTGTTTCCCTGCAAAAATCAGTCTCTGCTGGTCTGGTGG 58562 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTC 288422 ||| || || |||||||| || || || ||||| || || || | ||| ||| || Sbjct 58563 GATACCCTCCTTATCCTGTATCTTGGCCTTCACATTGTCAATGGTATCAGAACTC---TC 58619 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||||||||||||| |||| ||||| || || | |||||| Sbjct 58620 CACCTCCAACGTGATCGTCTTCCCCGTCAACGTCTTCACAAAGACCTGCAT 58670 Score = 116 bits (128), Expect = 9e-21 Identities = 165/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | ||| || || || | || || ||||| || |||||||| || Sbjct 4066 TCCACCACGAAGGCGAAGGACTAGGTGGAGTGTTGACTCCTTTTGAATGTTATAGTCAGC 4125 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || | || ||||| |||||||| ||||| || ||||| | ||| || ||| Sbjct 4126 AAGAGTCCTCCCATCTTCCAATTGTTTCCCTGCAAAAATCAGTCTCTGCTGGTCTGGTGG 4185 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTC 288422 ||| || || |||||||| || || || ||||| || || || | ||| ||| || Sbjct 4186 GATACCCTCCTTATCCTGTATCTTGGCCTTCACATTGTCAATGGTATCAGAACTC---TC 4242 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | ||||||||||||||| || | ||||| || || |||||||| Sbjct 4243 CACTTCCAACGTGATCGTCTTCCCCGTTAACGTCTTCACAAAGATCTGCAT 4293 Score = 114 bits (126), Expect = 3e-20 Identities = 171/239 (72%), Gaps = 13/239 (5%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| | | ||| || || || |||| ||| ||| || ||||| ||||| | Sbjct 4291 CATG-CCACCTCTCAATCTGAGAACTAGGTGAAGGGTGGATTCCTTCTGGATGTTATAAT 4349 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || ||||| | ||| ||||||||||| || || ||||| ||||| | ||| || | Sbjct 4350 CAGCCAGCGTTCTTCCATCTTCTAATTGCTTCCCAGCGAAAATCAGCCTCTGCTG---GT 4406 Query 288362 CTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415 |||| ||| ||||| ||||| ||||||||||| || || || || || | || || Sbjct 4407 CTGGCGCGATACCTTCCTTATCTTGGATTTTCGCCTTAACATTATCAATTGTGTCCGAGC 4466 Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || ||||| | || || || |||||||| | || || || || || |||||| Sbjct 4467 TC---TCAACTTCCAATGTAATGGTTTTCCCGGTTAAGGTTTTAACAAAGATTTGCATT 4522 Score = 114 bits (126), Expect = 3e-20 Identities = 168/235 (71%), Gaps = 12/235 (5%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | ||| || || || | || || ||||| ||||| || || || Sbjct 4522 TCCACCACGGAGACGAAGAACAAGGTGGAGTGTTGACTCCTTTTGAATATTGTAATCAGC 4581 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT-- 288363 ||| || ||||| || || | ||||||||||| ||||||| ||| ||||| |||| Sbjct 4582 GAGAGTCCGTCCATCCTCGAGCTGTTTTCCTGCAAAGATCAAACGTTGTTG---ATCTGG 4638 Query 288364 -GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGA 288419 || || ||||| ||||| |||||||| || || || || || || | || ||| Sbjct 4639 CGGAATACCTTCCTTATCTTGGATTTTGGCCTTAACATTATCAATCGTGTCCGAGCT--- 4695 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| ||||| | ||||| || ||||| |||| || || || || || |||||| Sbjct 4696 TTCGACTTCCAATGTGATTGTTTTCCCAGTCAAGGTTTTAACAAAAATTTGCATT 4750 Score = 89.7 bits (98), Expect = 1e-12 Identities = 152/219 (69%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 288259 CTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCG 288318 || || || || |||| || ||| || ||||| ||||| || || || || | ||| Sbjct 58684 CTGAGAACAAGGTGAAGGGTTGATTCCTTCTGGATGTTATAATCAGCCAGAGTTCTTCCA 58743 Query 288319 TCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTA 288378 ||||||||||| || || || || |||| | ||| ||| | |||||| || || || Sbjct 58744 TCTTCTAATTGCTTCCCAGCAAAAATCAACCTCTGCTGATCAGGTGGGATACCCTCCTTG 58803 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTG 288435 || || ||||| | || || || ||||| | || |||| || ||||| | |||| Sbjct 58804 TCTTGAATTTTAGACTTAACATTGTCTATCGTGTCCGAGCTC---TCAACTTCCAACGTG 58860 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || || | ||||| || || || |||||| Sbjct 58861 ATTGTTTTTCCAGTTAAGGTCTTAACAAAAATTTGCATT 58899 Score = 87.8 bits (96), Expect = 4e-12 Identities = 137/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || |||||||| ||||| || || || | || || || || |||||||| || ||| Sbjct 58024 TCCTTCTGGATATTGTAGTCCGCCAGTGTCCTACCATCCTCCAACTGTTTTCCAGCAAAG 58083 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || || || |||||||||||||| || ||||| ||||| || Sbjct 58084 ATGAGCCTCTGCTGGTCCGGCGGAATACCTTCTTTATCCTGTATCTTCGCCTTCACATTG 58143 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || ||||| | ||||| ||||| || || | || || Sbjct 58144 TCAATCGTGTCTGAGCTC---TCAACTTCCAATGTGATGGTCTTTCCCGTTAAGGTTTTA 58200 Query 288460 ACGAATATCTGCATT 288474 || || || |||||| Sbjct 58201 ACAAAGATTTGCATT 58215 >seq49251 Length=53185 Score = 132 bits (146), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || |||||||||| || ||| || ||||| || || ||||| Sbjct 47152 CCACCACGGAGACGGAGCACGAGATGAAGAGTCGATTCCTTCTGGATGTTGTAATCGGCT 47211 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | || ||||| |||| ||||||||||| || ||||||| Sbjct 47212 AGGGTTCGGCCGTCTTCAAGCTGCTTTCCGCCGAAAATCAGACGCTGCTG---ATCTGGG 47268 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||| || || ||||| || |||||||| || || || | ||| ||||| Sbjct 47269 GGAATCCCTTCCTTGTCTTGGATCTTGGCTTTCACATTGTCGATTGTGTCGGAAGATTCA 47328 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| || || || | || || || ||||| |||||||| Sbjct 47329 ACCTCAAGGGTGATTGTTTTACCCGCTAGGGTTTTCACGAAGATCTGCAT 47378 >seq19192 Length=430667 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || || | ||| ||| ||||||||||| || || || Sbjct 373178 CCACCACGAAGGCGAAGCACAAGGTGGAGTGTGGATTCCTTTTGGATATTGTAATCTGCA 373237 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || || || || | ||| ||| |||| Sbjct 373238 AGGGTGCGCCCATCCTCCAGCTGCTTACCAGCAAATATGAGCCTCTGCTGATCTGGTGGG 373297 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || |||||||| ||||| ||||| || |||||||| || |||| || |||| || Sbjct 373298 ATCCCTTCTTTGTCCTGAATTTTGGCCTTCACGTTGTCAATAGTGTCAGAGCTC---TCC 373354 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | ||||| |||||||| |||| ||| || || ||||||||||| Sbjct 373355 ACTTCCAAAGTGATGGTCTTCCCTGTCAAAGTTTTAACAAATATCTGCAT 373404 Score = 87.8 bits (96), Expect = 4e-12 Identities = 139/196 (71%), Gaps = 10/196 (5%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| ||||| || || || || || || || ||||| | || ||||| || ||| Sbjct 373898 TCCTTTTGAATATTGTAATCAGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAG 373957 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| || ||||| || ||||| || || || |||||||| |||||| Sbjct 373958 ATCAGCCTCTGCTGG---TCTGGAGGAATCCCTTCCTTGTCTTGAATTTTCGCCTTCACG 374014 Query 288400 TTTTCTATAGAATCGCTCGATTCT--ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCT 288457 || || || | || | | ||| || || || || || || || || || ||||| | Sbjct 374015 TTATCAATTGTGTC--TGAACTCTCGACCTCAAGAGTAATGGTTTTGCCAGTAAGAGTTT 374072 Query 288458 TGACGAATATCTGCAT 288473 | || ||||||||||| Sbjct 374073 TAACAAATATCTGCAT 374088 Score = 86.0 bits (94), Expect = 1e-11 Identities = 164/238 (69%), Gaps = 13/238 (5%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || | ||| | ||| || | ||||| || ||| || || ||||| || | Sbjct 373630 CATG-CCTCCCCTGAGACGAAGCACCAAATGAAGGGTTGATTCCTTCTGAATATTGTAAT 373688 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || || | ||| || || | |||||| || || || |||| | ||| || | Sbjct 373689 CTGCAAGGGTCCTTCCATCCTCAAGTTGTTTCCCAGCAAATATCAACCTCTGCTGG---T 373745 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415 |||| || || || || |||||||| || || || || || || || | ||| || Sbjct 373746 CTGGAGGAATACCCTCCTTGTCCTGGATCTTTGCCTTTACATTGTCGATGGTATCTGAGC 373805 Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || ||||||||||| || || | ||| || || || |||||||| Sbjct 373806 TC---TCAACTTCAAGGGTGATCGTCTTGCCCGTTAAAGTTTTAACAAAAATCTGCAT 373860 >seq3636 Length=134301 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || |||| ||| |||||| ||||| ||||| || || Sbjct 16309 CCACCACGGAGACGAAGCACAAGGTGAAGGGTGGATTCTTTCTGGATGTTATAATCAGCA 16250 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || || || |||| | ||| ||| ||| Sbjct 16249 AGGGTACGACCATCCTCCAGCTGCTTACCAGCAAAAATCAACCTCTGCTGATCTGGTGGA 16190 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || ||||| || || ||||||||||| || |||| ||| |||| || Sbjct 16189 ATACCCTCCTTGTCCTGAATCTTTGCTTTCACGTTATCAATAGTATCAGAGCTC---TCC 16133 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||| |||||||| || ||||||||||| ||||||||||| Sbjct 16132 ACCTCCAAAGTGATAGTCTTCCCAGTTAGAGTCTTGACAAATATCTGCAT 16083 Score = 116 bits (128), Expect = 9e-21 Identities = 167/233 (72%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || |||| ||| || || ||||| || ||||| || Sbjct 15625 CCACCACGCAGACGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 15566 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 || ||||| || ||||| | || ||||| || ||||||| | ||| ||| ||||| Sbjct 15565 AGAGTGCGCCCATCTTCAAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGA---TCTGGA 15509 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 ||| ||||| || |||||||| ||||| ||||| || || || | ||| ||| Sbjct 15508 GGGATGCCTTCCTTGTCCTGGATCTTCGCCTTCACATTGTCAATGGTGTCGGAGCTC--- 15452 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| ||||||||||||| || || || || |||||||| Sbjct 15451 TCAACCTCAAGGGTGATGGTCTTCCCGGTCAATGTTTTTACAAAAATCTGCAT 15399 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || |||| ||| ||| |||||||| || |||||||| Sbjct 15397 CCACCACGTAGACGGAGGACAAGGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCGGCA 15338 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || |||| || ||||| || ||||||| | ||| ||| ||| Sbjct 15337 AGAGTGCGGCCATCCTCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCGGGAGGG 15278 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 |||||||| || ||||| || || || || || || || |||| ||| ||| || Sbjct 15277 ATTCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCAATAGTGTCGGAACTC---TCA 15221 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || || || ||||| || ||||| || || || ||||| Sbjct 15220 ACCTCGAGAGTAATGGTTTTTCCGGTGAGCGTCTTTACAAAGATTTGCAT 15171 Score = 107 bits (118), Expect = 5e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || | ||| | |||| ||||| |||||||| || || || || || | || || Sbjct 16066 AGCACCAAATGCAACGTGGACTCTTTCTGGATATTGTAATCAGCAAGGGTCCTCCCATCC 16007 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || || || ||||||| ||||| ||| ||| || ||||||||||| Sbjct 16006 TCAAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATCTGGTGGAATCCCTTCTTTATCT 15947 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| ||||| || ||||| || || | ||| ||| || || | ||||||||| Sbjct 15946 TGGATCTTCGCCTTTACGTTATCAATTGTATCAGAACTTTCGACCTCCAAGGTGATCGTC 15887 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| |||| ||||| || || |||||||| Sbjct 15886 TTCCCTGTCAATGTCTTCACAAAGATCTGCAT 15855 >seq50574 Length=377344 Score = 125 bits (138), Expect = 2e-23 Identities = 169/233 (73%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | |||| || ||| || ||||| || || |||||| Sbjct 95049 CCACCACGGAGACGGAGGACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCGGCG 95108 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || |||||||| || | || ||| |||||| Sbjct 95109 AGAGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATAAGCCTTTGCTGA---TCTGGG 95165 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 |||||||| || ||||||||||| ||||| ||||| || || | ||| ||| Sbjct 95166 GGAATTCCTTCCTTGTCCTGGATTTTGGCTTTTACGTTGTCGATTGTGTCGGAACTC--- 95222 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| ||||| ||||| || || || ||||| |||||||| Sbjct 95223 TCGACCTCGAGAGTGATGGTCTTTCCGGTAAGGGTTTTCACGAAGATCTGCAT 95275 >seq7668 Length=316181 Score = 123 bits (136), Expect = 6e-23 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||| ||||| | || |||||||||| || || || ||||| || || ||||| Sbjct 198745 CCACTACGGAGACGGAGCACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGCT 198686 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||||| | || ||||| ||||| ||||||||||| || ||||||| Sbjct 198685 AGGGTTCGGCCGTCTTTAAGCTGCTTTCCGGCGAAAATCAGACGCTGCTG---ATCTGGG 198629 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||| || || ||||| || | |||||| || || || | ||| ||||| Sbjct 198628 GGAATCCCTTCCTTGTCTTGGATCTTGGATTTCACATTGTCGATTGTGTCGGAAGATTCA 198569 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| || || || || || || || ||||| |||||||| Sbjct 198568 ACCTCAAGGGTGATTGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 198519 >seq32633 Length=132462 Score = 118 bits (130), Expect = 2e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || |||| || ||| || || || ||||| || || Sbjct 60202 CCACCACGGAGGCGAAGAACCAGGTGAAGAGTTGATTCCTTCTGAATGTTATAATCAGCA 60261 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || || || ||||| | ||| || ||| Sbjct 60262 AGGGTACGACCATCCTCCAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGA 60321 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 || ||||| |||||||| || || || |||||||| || |||| |||| ||| ||| Sbjct 60322 ATACCTTCCTTATCCTGAATCTTTGCCTTCACGTTGTCAATAGTATCGGAGCTC---TCT 60378 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | || ||||||||||| ||||| |||||||| || |||||||| Sbjct 60379 ACCTCCAAGGTAATCGTCTTCCCAGTCAGCGTCTTGACAAAGATCTGCAT 60428 Score = 116 bits (128), Expect = 9e-21 Identities = 167/233 (72%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | || || || || ||||| | ||| ||| || || ||||| ||||| || Sbjct 60886 CCACCCCTCAGCCTCAGCACCAGATGCAGAGTGGATTCCTTCTGAATATTGTAGTCAGCA 60945 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | ||| ||||| || ||||||| | ||| ||| ||||| Sbjct 60946 AGAGTACGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGA---TCTGGA 61002 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 || |||||||||||||||||||| ||||| || || || || | |||| ||| Sbjct 61003 GGAATGCCTTCTTTATCCTGGATTTTAGCTTTGACATTGTCAATTGTATCGGAACTC--- 61059 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || ||||| || |||| ||| || || || |||||||| Sbjct 61060 TCAACCTCAAGGGTAATAGTCTTTCCTGTCAAAGTTTTTACAAAGATCTGCAT 61112 Score = 104 bits (114), Expect = 6e-17 Identities = 166/232 (72%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || ||||| | || || ||||||||||| ||||| || Sbjct 61342 CCACCACGCAGACGAAGGACAAGATGGAGGGTAGACTCCTTTTGGATATTGTAGTCAGCA 61401 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || || || || || ||||| || ||||| || ||||||| || || ||| |||| Sbjct 61402 AGAGTTCGGCCATCCTCTAACTGCTTTCCAGCAAAGATCA-AC-CT-TTGCTGATCTGGA 61458 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || |||||||| ||||| ||||| || || || || || || |||| | || | ||| Sbjct 61459 GGAATTCCTTCCTTATCTTGGATCTTTGCCTTAACATTGTCGATAG--TGTCTGAACTCT 61516 Query 288424 --ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| || || || || || ||||| || || || ||||| Sbjct 61517 CAACCTCGAGAGTGATGGTTTTGCCAGTGAGGGTCTTTACAAAGATTTGCAT 61568 >seq3114 Length=370656 Score = 118 bits (130), Expect = 2e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || |||| ||| || || |||||||| ||||| || Sbjct 9857 CCACCACGGAGGCGAAGGACAAGGTGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCT 9916 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || |||||||| |||| ||||| || ||||| Sbjct 9917 AGTGTTCGGCCATCCTCAAGCTGCTTACCTGCGAAAATCAACCGCTGCTGG---TCTGGA 9973 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 |||||||| || ||||| || || || || || || || || | || || ||| Sbjct 9974 GGAATTCCTTCCTTGTCCTGAATCTTAGCCTTGACATTGTCAATGGTGTCCGATGACTCT 10033 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | || || |||||||| ||||| ||||| |||||||||||||| Sbjct 10034 ACCTCTAAGGTAATAGTCTTCCCCGTCAGGGTCTTCACGAATATCTGCAT 10083 >seq50758 Length=122349 Score = 116 bits (128), Expect = 9e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || | |||| ||| ||| || ||||||||||| || || Sbjct 118718 CCACCACGAAGACGGAGCACCAAGTGAAGTGTGGATTCCTTCTGGATATTATAATCAGCT 118659 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | || ||||| || || || || || ||||||| | ||| || |||| Sbjct 118658 AAAGTTCTCCCATCTTCCAACTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGGG 118599 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || ||||| || || || || |||| |||| ||| ||| Sbjct 118598 ATACCCTCCTTGTCCTGAATCTTCGCCTTAACATTGTCAATAGTATCGGAGCTTTCGACT 118539 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| |||||||| || || || |||||||| |||||||| Sbjct 118538 TCGAGGGTGATAGTCTTCCCAGTGAGTGTTTTGACGAAGATCTGCAT 118492 Score = 111 bits (122), Expect = 4e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || || || || || || || || ||||| || ||||| || || ||| Sbjct 118226 TCCTTCTGAATGTTGTAATCAGCTAGGGTACGGCCATCTTCCAACTGTTTGCCAGCAAAG 118167 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| ||| ||||||||| ||||||||||| || ||||| || ||||| Sbjct 118166 ATCAACCTCTGCTGATCTGGTGGGATTCCCTCTTTATCCTGAATCTTCGCCTTAACGTTG 118107 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| ||| ||||| || ||||| || |||||||| || || ||||| Sbjct 118106 TCAATTGTGTCGGAGCTTTCGACTTCAAGGGTGATTGTTTTCCCGGTTAGGGTTTTGACA 118047 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 118046 AAGATTTGCAT 118036 >seq33627 Length=115891 Score = 109 bits (120), Expect = 1e-18 Identities = 172/244 (70%), Gaps = 12/244 (5%) Strand=Plus/Minus Query 288235 ATTCATACATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATA 288294 ||||| | | |||||||||||| || || |||||||||| || || |||||| Sbjct 50892 ATTCAGAAGTCTCCACCGCGGAGCCTGAGCACGAGATGAAGAGTAGACTC----TGGATA 50837 Query 288295 TTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGT 288354 || ||||| || |||||||| || || || | || || || || ||||| || | ||| Sbjct 50836 TTGTAGTCTGCAAGCGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGC 50777 Query 288355 TGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTC--ACGTTTTCTATAGAAT 288412 ||| ||| || ||||| |||||||| || || || ||| | || || || | || Sbjct 50776 TGATCTGGTGGAATGCCTTCCTTATCCTGTATCTTTGCCTTCAAAAATTGTCCATGGTAT 50717 Query 288413 C---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCT 288469 | |||| || || || | ||||| |||||||| |||| ||||| || || |||| Sbjct 50716 CTGAGCTC---TCCACCTCCAAGGTGATTGTCTTCCCAGTCAATGTCTTCACAAAGATCT 50660 Query 288470 GCAT 288473 |||| Sbjct 50659 GCAT 50656 >seq10975 Length=265031 Score = 100 bits (110), Expect = 7e-16 Identities = 87/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 |||||||| || || || || ||||| || || || || | ||||||||||| || ||| Sbjct 83496 CCTTCTTTGTCTTGAATCTTAGCTTTGACATTGTCAATGGTGTCGCTCGATTCAACCTCG 83555 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 |||||||| ||||||||||| || || || ||||| ||||||||| || Sbjct 83556 AGCGTGATTGTCTTCCCGGTTAGGGTTTTCACGAAGATCTGCATTTTG 83603 >seq48356 Length=183133 Score = 91.5 bits (100), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 |||||||| || || ||||| ||||| || || || || | ||| || ||||| |||||| Sbjct 106515 CCTTCTTTGTCTTGTATTTTGGCTTTAACATTGTCGATTGTATCACTGGATTCAACTTCG 106456 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || || || || ||||| || ||||||||||||||| Sbjct 106455 AGAGTTATGGTTTTACCAGTGAGAGTTTTCACGAATATCTGCATT 106411 >seq9134 Length=246095 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 ||||| || ||||| || || || || || || || || | |||||||||||| ||||| Sbjct 90913 CCTTCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATGGTATCGCTCGATTCGACTTCA 90972 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| |||||||| || || || || ||||| |||||||| Sbjct 90973 AGGGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAAATCTGCAT 91016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178851406300784