Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06]
53,128 sequences; 1,222,768,627 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq20296 125 8e-24
seq51452 114 1e-20
seq3636 107 2e-18
seq19192 105 7e-18
seq32633 96.9 4e-15
seq50758 95.1 1e-14
seq50574 95.1 1e-14
seq33627 87.8 2e-12
>seq20296
Length=523354
Score = 125 bits (138), Expect = 8e-24
Identities = 162/221 (73%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | ||||||||| | ||| ||||| || || ||||||||||| || || || |
Sbjct 452956 ACGAAGCACCAAATGGAGAGTGGATTCCTTCTGGATGTTGTAATCAGCTAGGGTTCGGCC 452897
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || ||||| || || ||||| ||||| ||||||||||| | ||| | || |||||
Sbjct 452896 ATCCTCCAGCTGTTTTCCGGCGAAAATGAGCCGCTGCTGGTCCGGTGGAATGCCTTCCTT 452837
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171
|||| ||| ||| || | ||| | | | |||||| ||||| || || | ||||
Sbjct 452836 GTCCTGGATCTTTGCCTTCA-CGTTGTCGATTGTGTCGGAGGATTCGACCTCAAGGGTGA 452778
Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTC 42212
|||| || |||||||| || || || ||||| ||||| |||
Sbjct 452777 TGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATCTTC 452737
>seq51452
Length=252770
Score = 114 bits (126), Expect = 1e-20
Identities = 146/197 (74%), Gaps = 8/197 (4%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| ||||||||||||||||| || |||| | || || | |||||| ||||| ||
Sbjct 3874 CTCCTTCTGAATATTGTAATCAGCAAGTGTCCTACCATCCTCCAACTGCTTCCCAGCAAA 3933
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135
|| || | ||||||||| | ||| | || |||||| ||| ||| | |||| || |
Sbjct 3934 GATAAGCCTCTGCTGGTCTGGTGGAATGCCCTCCTTATCC-TGAATCTTTGCCTTCACAT 3992
Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192
| | | |||||| |||| || || || | ||||||||||| ||||||| || |
Sbjct 3993 TGTCAATCGTGTCTGAGCTC---TCAACTTCTAATGTGATGGTTTTTCCCGTTAAGGTTT 4049
Query 42193 TTACAAAGATTTGCATT 42209
| |||||||||||||||
Sbjct 4050 TAACAAAGATTTGCATT 4066
Score = 102 bits (112), Expect = 9e-17
Identities = 143/197 (73%), Gaps = 8/197 (4%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||||||||| || || ||||| ||||||| | | || || | ||||| || || ||
Sbjct 58251 CTCCTTTTGAATGTTATAGTCAGCAAGAGTCCTCCCATCTTCCAATTGCTTTCCTGCAAA 58310
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
||| || | ||||| || | ||| | || ||||||| | ||| |||||| | | | |
Sbjct 58311 TATCAGCCTTTGCTGATCCGGTGGGATGCCTTCCTTGT-CTTGAATTTTTGCCTTAACAT 58369
Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192
| | | |||||| |||| || || || | ||||| ||||| || |||| ||||
Sbjct 58370 TGTCAATCGTGTCCGAGCTC---TCAACTTCCAATGTGATTGTTTTCCCAGTTAAGGTCT 58426
Query 42193 TTACAAAGATTTGCATT 42209
| |||||||||||||||
Sbjct 58427 TAACAAAGATTTGCATT 58443
Score = 100 bits (110), Expect = 3e-16
Identities = 142/196 (72%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
||||||||||||||| ||||| || ||||| ||| | || || || ||||| || || ||
Sbjct 4786 CTCCTTTTGAATATTATAATCTGCGAGAGTACGCCCATCTTCCAGTTGCTTCCCTGCAAA 4845
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
||| || | |||||| || | ||| | | |||||||| | || |||| | | | | |
Sbjct 4846 TATCAGCCTCTGCTGATCCGGTGGGATACCCTCCTTGT-CTTGTATTTTCGCCTTAACAT 4904
Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192
| | | ||||| ||| ||| || || | ||||||||||| || ||||| || |
Sbjct 4905 TGTCTATGGTGTCCGAGCT---TTCAACTTCCAGTGTGATGGTTTTTCCAGTTAGGGTTT 4961
Query 42193 TTACAAAGATTTGCAT 42208
| |||||||| |||||
Sbjct 4962 TAACAAAGATCTGCAT 4977
Score = 91.5 bits (100), Expect = 2e-13
Identities = 140/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| || || || |||||||||||||| | | || |||| ||||| ||||| ||
Sbjct 58708 TCCTTCTGGATGTTATAATCAGCCAGAGTTCTTCCATCTTCTAATTGCTTCCCAGCAAAA 58767
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| | | |||||| || | ||| | | |||||||| | ||| |||| | | | | |
Sbjct 58768 ATCAACCTCTGCTGATCAGGTGGGATACCCTCCTTGT-CTTGAATTTTAGACTTAACATT 58826
Query 42138 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193
| | | |||||| |||| || || || | |||||| ||||| || |||| |||||
Sbjct 58827 GTCTATCGTGTCCGAGCTC---TCAACTTCCAACGTGATTGTTTTTCCAGTTAAGGTCTT 58883
Query 42194 TACAAAGATTTGCATT 42209
||||| |||||||||
Sbjct 58884 AACAAAAATTTGCATT 58899
Score = 87.8 bits (96), Expect = 2e-12
Identities = 137/195 (70%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
||||||||||||||||||||| || ||||| || | || || ||||| || || |||||
Sbjct 59163 CTCCTTTTGAATATTGTAATCTGCGAGAGTATGCCCATCCTCGAGCTGTTTTCCTGCGAA 59222
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| | || || || || | ||| | | || |||||| |||||| ||| | |
Sbjct 59223 GATCAAACGTTGTTGATCTGGTGGAATACCTTCTTTGTCCTGGATTTTGGCTTTAACATT 59282
Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193
| | |||||| ||| || || |||| || | ||| ||||| || || |||||
Sbjct 59283 GTCGATCGTGTCTGAACTC---TCAACTTCGAGAGTTACGGTCTTGCCAGTCAGGGTCTT 59339
Query 42194 TACAAAGATTTGCAT 42208
|||||||| |||||
Sbjct 59340 CACAAAGATCTGCAT 59354
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/197 (71%), Gaps = 8/197 (4%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
||||||||||||||| ||||| |||||||| ||| | || || | ||||| ||||| ||
Sbjct 58935 CTCCTTTTGAATATTATAATCTGCCAGAGTGCGCCCATCTTCCAATTGCTTCCCAGCAAA 58994
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCG 42135
|| |||| || ||||| | ||| | | ||||| | | ||| |||| || || |
Sbjct 58995 AATCAGTCTTTGTTGGTCCGGTGGAATACCTTCCTTAT-CTTGAATTTTCGTCTTAACAT 59053
Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192
| | | || || |||| || || || | |||||| ||||| || |||| || |
Sbjct 59054 TATCAATAGTATCCGAGCTC---TCAACTTCCAACGTGATTGTTTTTCCGGTTAATGTTT 59110
Query 42193 TTACAAAGATTTGCATT 42209
| || || |||||||||
Sbjct 59111 TAACGAAAATTTGCATT 59127
>seq3636
Length=134301
Score = 107 bits (118), Expect = 2e-18
Identities = 95/119 (80%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
||||| || ||||| | |||||||||||| ||| ||| || || ||||||||||||||
Sbjct 16081 CCTCCCCTCAAACGGAGCACCAAATGCAACGTGGACTCTTTCTGGATATTGTAATCAGCA 16022
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| |||| | | || || |||||||||||||| || || | ||||||||| || | |||
Sbjct 16021 AGGGTCCTCCCATCCTCAAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATCTGGTGG 15963
Score = 102 bits (112), Expect = 9e-17
Identities = 142/195 (73%), Gaps = 8/195 (4%)
Strand=Plus/Minus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
|||||||| || ||||| || || ||||| || | || ||||||||||| ||||| ||
Sbjct 15361 TCCTTTTGGATGTTGTAGTCGGCAAGAGTGCGGCCATCCTCTAGCTGCTTTCCAGCAAAG 15302
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136
|| | | |||||| |||| || | | ||||||||| ||| | || | |||| |
Sbjct 15301 ATCAACCTCTGCTGATCGGGAGGGATTCCTTCCTTGTCC-TGAATCTTAGCCTTGACATT 15243
Query 42137 CGCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193
| | |||||| ||| || || |||| || |||||||| || || ||||||||
Sbjct 15242 ATCAATAGTGTCGGAACTC---TCAACCTCGAGAGTAATGGTTTTTCCGGTGAGCGTCTT 15186
Query 42194 TACAAAGATTTGCAT 42208
|||||||||||||||
Sbjct 15185 TACAAAGATTTGCAT 15171
Score = 87.8 bits (96), Expect = 2e-12
Identities = 137/195 (70%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||||||||||||||| || || ||||| || | || || |||||||| ||||| ||
Sbjct 15818 CTCCTTTTGAATATTGTAGTCGGCAAGAGTTCGTCCATCCTCAAGCTGCTTTCCAGCAAA 15759
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| | || ||||||||| | || | || ||||||||| ||| || || | |
Sbjct 15758 AATCAATCTCTGCTGGTCTGGAGGGATGCCTTCCTTGTCCTGGATCTTCGCCTTAACATT 15699
Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193
| | ||||| |||| || || |||| |||||||| || || || | |||||
Sbjct 15698 GTCAATGGTGTCCGAGCTC---TCAACTTCGAGGGTGATGGTCTTCCCAGTCAATGTCTT 15642
Query 42194 TACAAAGATTTGCAT 42208
|| || || |||||
Sbjct 15641 AACGAAAATCTGCAT 15627
>seq19192
Length=430667
Score = 105 bits (116), Expect = 7e-18
Identities = 165/232 (71%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
|||||| || ||||||||||||| ||| | ||| |||||| || || || ||||||||
Sbjct 373405 ACCTCCCCTCAAACGCAACACCAGATGAAGTGTCGACTCCTTCTGTATGTTATAATCAGC 373464
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| |||| | || || || ||||| || || ||||| |||||||||||||| | ||
Sbjct 373465 AAGTGTCCTTCCATCTTCAAGTTGCTTCCCTGCAAATATCAGTCGCTGCTGGTCTGGGGG 373524
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGA---TT 42156
| | ||||||| | ||| |||| | || | | | | ||||| ||| |
Sbjct 373525 AATCCCTTCCTTGT-CTTGAATTTTGGCCTTCACATTATCAATTGTGTC---CGAACTCT 373580
Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || || | ||||| ||||| || || | ||||| ||||||||||||||
Sbjct 373581 CAACCTCCAAGGTGATAGTTTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 373632
Score = 104 bits (114), Expect = 3e-17
Identities = 143/196 (73%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||||||||||||||||||||| ||||| || | || || |||||||| ||||| ||
Sbjct 374125 CTCCTTTTGAATATTGTAATCAGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAA 374184
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135
|| || | ||||||||| | || | | ||||||| | ||| |||| | || |
Sbjct 374185 GATCAGCCTCTGCTGGTCTGGGGGAATCCCTTCCTTGT-CTTGAATTTTGGCCTTCACGT 374243
Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192
| | | ||||| ||| || || |||| ||||||||||| || || || ||||
Sbjct 374244 TATCAATTGTGTCTGAACTC---TCAACCTCGAGAGTGATGGTTTTTCCAGTGAGTGTCT 374300
Query 42193 TTACAAAGATTTGCAT 42208
| |||||||| |||||
Sbjct 374301 TCACAAAGATCTGCAT 374316
Score = 98.7 bits (108), Expect = 1e-15
Identities = 141/195 (72%), Gaps = 8/195 (4%)
Strand=Plus/Plus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
|||||||| ||||||||||| || || || ||| | || || |||||||||||||| |||
Sbjct 373214 TCCTTTTGGATATTGTAATCTGCAAGGGTGCGCCCATCCTCCAGCTGCTTACCAGCAAAT 373273
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
||||| | |||||| || | ||| | | || |||||| ||| |||| | | |||
Sbjct 373274 ATGAGCCTCTGCTGATCTGGTGGGATCCCTTCTTTGTCC-TGAATTTTGGCCTTCACGTT 373332
Query 42138 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193
| | | ||||| |||| ||||| || | |||||||| || || || | || ||
Sbjct 373333 GTCAATAGTGTCAGAGCTC---TCCACTTCCAAAGTGATGGTCTTCCCTGTCAAAGTTTT 373389
Query 42194 TACAAAGATTTGCAT 42208
||||| || |||||
Sbjct 373390 AACAAATATCTGCAT 373404
Score = 91.5 bits (100), Expect = 2e-13
Identities = 140/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||||||||||||||||||||| ||||| || | || || |||||||| ||||| ||
Sbjct 373897 CTCCTTTTGAATATTGTAATCAGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAA 373956
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135
|| || | ||||||||| | || | | ||||||| | ||| |||| | || |
Sbjct 373957 GATCAGCCTCTGCTGGTCTGGAGGAATCCCTTCCTTGT-CTTGAATTTTCGCCTTCACGT 374015
Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192
| | | ||||| ||| || || || | || ||||||||||| || || || |
Sbjct 374016 TATCAATTGTGTCTGAACTC---TCGACCTCAAGAGTAATGGTTTTGCCAGTAAGAGTTT 374072
Query 42193 TTACAAAGATTTGCAT 42208
| ||||| || |||||
Sbjct 374073 TAACAAATATCTGCAT 374088
>seq32633
Length=132462
Score = 96.9 bits (106), Expect = 4e-15
Identities = 160/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
||||| || || || | ||||||||| | ||| ||| || || || || ||||||||
Sbjct 60430 CCTCCCCTCAACCGGAGCACCAAATGGAGGGTGGACTCTTTCTGGATGTTATAATCAGCA 60489
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
||||||| | | || || |||||||||||||| || || | ||||||||||| | ||
Sbjct 60490 AGAGTCCTCCCATCCTCAAGCTGCTTACCAGCAAAAATTAAACGCTGCTGGTCCGGGGGA 60549
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 42158
| | || ||||| ||| ||| ||| | | | | || || ||| ||
Sbjct 60550 ATACCTTCTTTGTCTTGGATCTTTGCTTTCACATTATCAATTGTATCTGAACTC---TCA 60606
Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || | |||||| || || || || | |||||| |||||||| |||||
Sbjct 60607 ACTTCCAGCGTGATTGTCTTCCCAGTCAACGTCTTCACAAAGATCTGCAT 60656
Score = 93.3 bits (102), Expect = 5e-14
Identities = 162/232 (70%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| || || | |||| ||||||||| | || |||||||| || |||||||||||
Sbjct 60657 ACCACCCCTCAGGCGCAGCACCAAATGGAGGGTTGATTCCTTTTGGATGTTGTAATCAGC 60716
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| |||| | || || |||||||| ||||| || || || | ||||||||| | |||
Sbjct 60717 TAGTGTCCTTCCATCCTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCAGGTGG 60776
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156
| | ||||| | | ||| |||||| | | | | | | | ||||| |||| |
Sbjct 60777 AATCCCTTCCTTAT-CTTGAATTTTTGCCTTAACATTGTCGATGGTGTCCGAGCTC---T 60832
Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || || | || || ||||| || || | || || ||||||||||||||
Sbjct 60833 CAACTTCAAGAGTAATAGTTTTCCCAGTCAAGGTTTTCACAAAGATTTGCAT 60884
Score = 84.2 bits (92), Expect = 2e-11
Identities = 138/195 (71%), Gaps = 8/195 (4%)
Strand=Plus/Plus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| ||||| || |||||||| || || || | || || |||||||||||||| ||
Sbjct 60238 TCCTTCTGAATGTTATAATCAGCAAGGGTACGACCATCCTCCAGCTGCTTACCAGCAAAA 60297
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| || | ||||||||| | ||| | | ||||| ||| ||| | |||| | |||
Sbjct 60298 ATCAGCCTCTGCTGGTCTGGTGGAATACCTTCCTTATCC-TGAATCTTTGCCTTCACGTT 60356
Query 42138 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193
| | | || || |||| || || || | || || || || || || ||||||||
Sbjct 60357 GTCAATAGTATCGGAGCTC---TCTACCTCCAAGGTAATCGTCTTCCCAGTCAGCGTCTT 60413
Query 42194 TACAAAGATTTGCAT 42208
|||||||| |||||
Sbjct 60414 GACAAAGATCTGCAT 60428
>seq50758
Length=122349
Score = 95.1 bits (104), Expect = 1e-14
Identities = 141/195 (72%), Gaps = 4/195 (2%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||||||||| || || || |||| || || ||||| || || ||
Sbjct 118455 CTCCTTCTGGATGTTGTAATCAGCGAGGGTTCGGCCGTCTTCAAGTTGCTTTCCGGCAAA 118396
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135
|| || | |||||||| | ||| | | |||||||||| ||| | || | |||| ||
Sbjct 118395 GATCAGCCTTTGCTGGTCTGGTGGAATACCCTCCTTGTCC-TGAATCTTAGCCTTGA-CG 118338
Query 42136 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194
| | | | |||||| |||||| || | ||||||||||| || || | |||||
Sbjct 118337 TTGTCAATTGTGTCGGAGCTTTCCACCTCCAAAGTGATGGTTTTCCCAGTCAAAGTCTTC 118278
Query 42195 ACAAAGATTTGCATT 42209
||||| || ||||||
Sbjct 118277 ACAAAAATCTGCATT 118263
Score = 87.8 bits (96), Expect = 2e-12
Identities = 151/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | |||||| || | || |||||| ||||| ||||||||||| || || || |
Sbjct 118251 ACGGAGCACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCAGCTAGGGTACGGCC 118192
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || | ||| || ||||| || || | | |||||| || | ||| | | ||| ||
Sbjct 118191 ATCTTCCAACTGTTTGCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCTTT 118132
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171
||| ||| | || | | | ||| | | | |||||| ||| || || | ||||
Sbjct 118131 ATCC-TGAATCTTCGCCTTAACGTTGTCAATTGTGTCGGAGCTTTCGACTTCAAGGGTGA 118073
Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| ||||| || ||||| || || ||||||||||||||
Sbjct 118072 TTGTTTTCCCGGTTAGGGTTTTGACAAAGATTTGCAT 118036
Score = 87.8 bits (96), Expect = 2e-12
Identities = 151/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | |||||| || | |||| ||||| || ||||| |||||||| | ||| | | |
Sbjct 118707 ACGGAGCACCAAGTGAAGTGTGGATTCCTTCTGGATATTATAATCAGCTAAAGTTCTCCC 118648
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || | |||||||||||| || || | | ||||||||| | ||| | | ||||||
Sbjct 118647 ATCTTCCAACTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGGGATACCCTCCTT 118588
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171
|||| ||| | || | | | | | | | | || ||| ||| || |||| ||||
Sbjct 118587 GTCC-TGAATCTTCGCCTTAACATTGTCAATAGTATCGGAGCTTTCGACTTCGAGGGTGA 118529
Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || || || || || || || || ||||| |||||
Sbjct 118528 TAGTCTTCCCAGTGAGTGTTTTGACGAAGATCTGCAT 118492
>seq50574
Length=377344
Score = 95.1 bits (104), Expect = 1e-14
Identities = 162/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
||||| || | | || ||||||||||| ||| |||||| ||||| ||||| || ||
Sbjct 94593 CCTCCCCTCAGCCTCAGCACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGCA 94652
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
|| || || | || || | |||||| || || ||||| || | ||||||||| | ||
Sbjct 94653 AGGGTGCGACCATCTTCCAACTGCTTTCCTGCAAATATTAGCCTCTGCTGGTCTGGGGGA 94712
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 42157
| | |||||||||| ||| || |||| ||| | | | ||||| ||| ||
Sbjct 94713 ATCCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCAGAACTC---TC 94768
Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || | |||||||| ||||| || || || || || ||||| |||||
Sbjct 94769 GACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTTTTGACGAAGATCTGCAT 94819
>seq33627
Length=115891
Score = 87.8 bits (96), Expect = 2e-12
Identities = 112/152 (74%), Gaps = 2/152 (1%)
Strand=Plus/Minus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
||||| || |||||||| |||||||| | || |||||| || || || || || ||
Sbjct 50654 CCTCCCCTCAAACGCAAGACCAAATGGAGAGTCGCCTCCTTCTGGATGTTATAGTCCGCA 50595
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
||||||| |||| || || || |||||||| || || | ||||||||||| | ||
Sbjct 50594 AGAGTCCTGCCGTCCTCCAGTTGTTTACCAGCAAAGATCAAACGCTGCTGGTCTGGCGGG 50535
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGA 42132
| | |||||||| | ||| | |||| |||||
Sbjct 50534 ATACCCTCCTTGT-CTTGAATCTTTGCTTTGA 50504
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 542852052379520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |