Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06] 53,128 sequences; 1,222,768,627 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq30626 87.8 4e-12 >seq30626 Length=163280 Score = 87.8 bits (96), Expect = 4e-12 Identities = 176/255 (69%), Gaps = 6/255 (2%) Strand=Plus/Plus Query 150307 AGAAGGTAAACTTGATCCACTAATTGGTCGCGAAACTGAACTT-GATGATCTAATTCAGA 150365 || ||| ||||||||||| | || ||| | || ||| || || | |||||| || Sbjct 95831 AGCAGGAAAACTTGATCCTGTGATCGGTAGGGATGAAGAAATTCGAAGGG-TAATTCGGA 95889 Query 150366 TTCTTTCTCGTAAAACCAAAAAGAAT--GGTGCGTTAGTTGGTGAACCAGGTGTTGGTAA 150423 || | || | | || || || ||| ||||| ||| ||||||| || ||||||||||| Sbjct 95890 TTTTATCGAGGAGGACGAAGAATAATCCGGTGC-TTA-TTGGTGAGCCTGGTGTTGGTAA 95947 Query 150424 AACACAAATCGTTGACGGATTAGCACAACGCATCGCTAATGGTGATGTTCCAGATTCTAT 150483 |||| | | ||||| || |||||||| | || | | || ||||| || | | | Sbjct 95948 AACAGCAGTAGTTGAAGGGCTAGCACAAAGGATTGTTCGAGGCGATGTCCCGAGTAATTT 96007 Query 150484 GAAAGATGTTGAAATTCTTTCTTTGAATATGGGTGCATTTACTGCTGGTACTAAGTATCG 150543 |||||| | || | | ||| ||||||| ||||| | |||||| | || ||| | Sbjct 96008 AGCTGATGTTAGACTTATAGCATTGGATATGGGAGCATTAATTGCTGGAGCAAAATATAG 96067 Query 150544 TGGTGAATTCGAAGA 150558 |||||||| ||||| Sbjct 96068 AGGTGAATTTGAAGA 96082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1146809232345744