Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06]
53,128 sequences; 1,222,768,627 total letters
Query= NC_019929.1
Length=243050
Score E
Sequences producing significant alignments: (Bits) Value
seq27093 91.5 2e-13
seq51183 86.0 1e-11
seq42593 86.0 1e-11
seq20524 86.0 1e-11
seq11477 86.0 1e-11
>seq27093
Length=236599
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787
||||||||| |||||||||| ||||| ||||||||||| |||||| | |||||||||||
Sbjct 225459 GGATTGTAGTTCAGTTGGTC-AGAGTACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 225401
Query 169788 CCCCGTCAGTCC 169799
|||||||||||
Sbjct 225400 TCCCGTCAGTCC 225389
>seq51183
Length=29816
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787
||||||||| ||| |||||| |||| ||||||||||| |||||| | |||||||||||
Sbjct 4541 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 4599
Query 169788 CCCCGTCAGTCC 169799
||||||||||||
Sbjct 4600 CCCCGTCAGTCC 4611
>seq42593
Length=584
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787
||||||||| ||| |||||| |||| ||||||||||| |||||| | |||||||||||
Sbjct 111 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 169
Query 169788 CCCCGTCAGTCC 169799
||||||||||||
Sbjct 170 CCCCGTCAGTCC 181
>seq20524
Length=1208
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787
||||||||| ||| |||||| |||| ||||||||||| |||||| | |||||||||||
Sbjct 157 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 215
Query 169788 CCCCGTCAGTCC 169799
||||||||||||
Sbjct 216 CCCCGTCAGTCC 227
>seq11477
Length=2278
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787
||||||||| ||| |||||| |||| ||||||||||| |||||| | |||||||||||
Sbjct 2255 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 2197
Query 169788 CCCCGTCAGTCC 169799
||||||||||||
Sbjct 2196 CCCCGTCAGTCC 2185
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 777115574588800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |