Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06] 53,128 sequences; 1,222,768,627 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq51452 127 4e-24 seq50758 118 2e-21 seq32633 113 9e-20 seq19192 113 9e-20 seq3636 113 9e-20 seq44697 96.9 7e-15 seq38302 93.3 8e-14 seq33627 91.5 3e-13 seq48356 86.0 1e-11 seq3114 84.2 4e-11 >seq51452 Length=252770 Score = 127 bits (140), Expect = 4e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 || ||||| | ||| || | |||| || | || | ||| ||| || ||||||||||| Sbjct 58897 ATTCCACCACGAAGGCGGAGGACTAGGTGGAGTGTTGACTCCTTTTGA-ATATTATAATC 58955 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 | | || || |||| |||||||| || |||||||| || | ||| ||||| || || Sbjct 58956 TGCCAGAGTGCGCCCATCTTCCAATTGCTTCCCAGCAAAAATCAGTCTTTGTTGGTCCGG 59015 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 ||| || ||||| |||||||| ||||| | || |||||| |||| ||| || || Sbjct 59016 TGGAATACCTTCCTTATCTTGAATTTTCGTCTTAACATTATCAATAGTATCCGAGCTCTC 59075 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| | || || ||||| || ||||||||||||| || || |||||| Sbjct 59076 AACTTCCAACGTGATTGTTTTTCCGGTTAATGTTTTAACGAAAATTTGCATT 59127 Score = 118 bits (130), Expect = 2e-21 Identities = 172/239 (72%), Gaps = 3/239 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 || ||||| || || | | |||| || | ||| | ||| ||| || ||||||||||| Sbjct 4748 ATTCCACCCCTTAGCCTGAGAACTAGGTGGAGAGTTGACTCCTTTTGA-ATATTATAATC 4806 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 | | || || |||| |||| ||| || || ||||| || | ||||| ||||| || Sbjct 4807 TGCGAGAGTACGCCCATCTTCCAGTTGCTTCCCTGCAAATATCAGCCTCTGCTGATCCGG 4866 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 ||| || || || || ||||||||||| || ||||| ||| | || || ||| Sbjct 4867 TGGGATACCCTCCTTGTCTTGTATTTTCGCCTTAACATTGTCTATGGTGTCCGAGCTTTC 4926 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT-TTTATTA 192543 ||||| || || |||||||| ||||||| ||||||| ||| |||||||| | ||||| Sbjct 4927 AACTTCCAGTGTGATGGTTTTTCCAGTTAGGGTTTTAACAAAGATCTGCATCTGTATTA 4985 Score = 116 bits (128), Expect = 7e-21 Identities = 136/184 (74%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| |||||||||| | |||| | |||| || ||||| || |||||||| || || || Sbjct 58716 GATGTTATAATCAGCCAGAGTTCTTCCATCTTCTAATTGCTTCCCAGCAAAAATCAACCT 58775 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||| ||||||||||| || || || || ||||| |||||| || ||||| ||| | Sbjct 58776 CTGCTGATCAGGTGGGATACCCTCCTTGTCTTGAATTTTAGACTTAACATTGTCTATCGT 58835 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || || || ||||| | || || ||||| |||||||| || |||| ||| || || Sbjct 58836 GTCCGAGCTCTCAACTTCCAACGTGATTGTTTTTCCAGTTAAGGTCTTAACAAAAATTTG 58895 Query 192534 CATT 192537 |||| Sbjct 58896 CATT 58899 Score = 105 bits (116), Expect = 1e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 ||||| || || | | || | ||| | ||||| ||| || ||||| ||||||| Sbjct 3839 CCACCCCTCAGCCTCAGCACAAGATGGAGAGTAGACTCCTTCTGAATATTGTAATCAGCA 3898 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | ||| | |||| ||||| || || ||||||||||| | ||||| || || ||||| Sbjct 3899 AGTGTCCTACCATCCTCCAACTGCTTCCCAGCAAAGATAAGCCTCTGCTGGTCTGGTGGA 3958 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 || || || ||||| || || || || ||||| || | ||||| || ||| Sbjct 3959 ATGCCCTCCTTATCCTGAATCTTTGCCTTCACATTGTCAATCGTGTCTGAGCTCTCAACT 4018 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 |||| || |||||||| || ||||| ||||||| ||| || |||||| Sbjct 4019 TCTAATGTGATGGTTTTTCCCGTTAAGGTTTTAACAAAGATTTGCATT 4066 Score = 104 bits (114), Expect = 5e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 192333 ATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTG 192392 ||| | ||||| ||| || |||||| || || | | ||| | |||| ||||| || Sbjct 58011 ATGGAGAGTAGACTCCTTCTGGATATTGTAGTCCGCCAGTGTCCTACCATCCTCCAACTG 58070 Query 192393 TTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTT 192452 ||| ||||||||||| | ||||| || || || || || ||||||||||| ||||| || Sbjct 58071 TTTTCCAGCAAAGATGAGCCTCTGCTGGTCCGGCGGAATACCTTCTTTATCCTGTATCTT 58130 Query 192453 ATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGT 192512 || ||||| || | ||||| || ||||| | || ||||| || || || Sbjct 58131 CGCCTTCACATTGTCAATCGTGTCTGAGCTCTCAACTTCCAATGTGATGGTCTTTCCCGT 58190 Query 192513 TAATGTTTTAATAAATATCTGCATT 192537 ||| ||||||| ||| || |||||| Sbjct 58191 TAAGGTTTTAACAAAGATTTGCATT 58215 Score = 102 bits (112), Expect = 2e-16 Identities = 133/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| |||||||||| | |||| | |||| || ||||| || ||||| || || | || Sbjct 4339 GATGTTATAATCAGCCAGCGTTCTTCCATCTTCTAATTGCTTCCCAGCGAAAATCAGCCT 4398 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||| || || || | || ||||| |||||||| ||||| || |||||| || | Sbjct 4399 CTGCTGGTCTGGCGCGATACCTTCCTTATCTTGGATTTTCGCCTTAACATTATCAATTGT 4458 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || || || ||||| | ||||||||||| || ||||| ||||||| ||| || || Sbjct 4459 GTCCGAGCTCTCAACTTCCAATGTAATGGTTTTCCCGGTTAAGGTTTTAACAAAGATTTG 4518 Query 192534 CATT 192537 |||| Sbjct 4519 CATT 4522 Score = 86.0 bits (94), Expect = 1e-11 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 || ||||| | ||| || | |||| || | || | ||| ||| || || ||||| || Sbjct 4064 ATTCCACCACGAAGGCGAAGGACTAGGTGGAGTGTTGACTCCTTTTGA-ATGTTATAGTC 4122 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 || | || | |||| ||||||||||| || ||||| || | |||||| || || || Sbjct 4123 AGCAAGAGTCCTCCCATCTTCCAATTGTTTCCCTGCAAAAATCAGTCTCTGCTGGTCTGG 4182 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 ||| || || || ||||| ||||| || || ||||| || | ||| || || Sbjct 4183 TGGGATACCCTCCTTATCCTGTATCTTGGCCTTCACATTGTCAATGGTATCAGAACTCTC 4242 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || || || || || ||||| || || | ||| |||||||| Sbjct 4243 CACTTCCAACGTGATCGTCTTCCCCGTTAACGTCTTCACAAAGATCTGCAT 4293 >seq50758 Length=122349 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | |||||| | || || || | || | || || ||||||||||||| Sbjct 118721 ATCCCACCACGAAGACGGAGCACCAAGTGAAGTGTGGATTCCTTCTGGATATTATAATCA 118662 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | ||| |||| |||| ||||| || |||||||||||||| || ||||| || || ||| Sbjct 118661 GCTAAAGTTCTCCCATCTTCCAACTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGT 118602 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || || || || || || ||||| |||| ||| || ||| Sbjct 118601 GGGATACCCTCCTTGTCCTGAATCTTCGCCTTAACATTGTCAATAGTATCGGAGCTTTCG 118542 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || || || || || ||||| | |||||| | || |||||||| Sbjct 118541 ACTTCGAGGGTGATAGTCTTCCCAGTGAGTGTTTTGACGAAGATCTGCAT 118492 Score = 113 bits (124), Expect = 9e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | |||||| | || || || | ||| | ||| || || || |||||| Sbjct 118265 ATTCCACCACGAAGACGGAGCACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCA 118206 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || || || |||| ||||| ||||| ||||||||||| || ||||| ||||| ||| Sbjct 118205 GCTAGGGTACGGCCATCTTCCAACTGTTTGCCAGCAAAGATCAACCTCTGCTGATCTGGT 118146 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||| |||||||| || || || || || || || | || || ||| Sbjct 118145 GGGATTCCCTCTTTATCCTGAATCTTCGCCTTAACGTTGTCAATTGTGTCGGAGCTTTCG 118086 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || || || ||||| || |||| ||||| | ||| || ||||| Sbjct 118085 ACTTCAAGGGTGATTGTTTTCCCGGTTAGGGTTTTGACAAAGATTTGCAT 118036 Score = 107 bits (118), Expect = 4e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 ||||||||||||| | || | | |||| |||||||| || || |||||||| | ||| Sbjct 118901 ATATTATAATCAGCCAGAGTCCTTCCATCTTCCAATTGCTTCCCCGCAAAGATCAGCCTC 118842 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || ||||| || || || || || || || || || ||| ||| ||||| |||| | Sbjct 118841 TGCTGATCCGGGGGAATACCCTCCTTGTCCTGAATCTTAGCTTTCACATTGTCAATAGTA 118782 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 || || ||| || || | ||| |||||||| || || || ||||| | ||| |||||| Sbjct 118781 TCAGAACTTTCCACCTCCAAAGTGATGGTTTTCCCGGTCAACGTTTTCACAAAAATCTGC 118722 Query 192535 AT 192536 || Sbjct 118721 AT 118720 >seq32633 Length=132462 Score = 113 bits (124), Expect = 9e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||||| | || | ||| | |||| ||| || |||||| || ||| Sbjct 61339 ATACCACCACGCAGACGAAGGACAAGATGGAGGGTAGACTCCTTTTGGATATTGTAGTCA 61398 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | ||||| |||| || || || || ||||||||||| || || || ||||| || Sbjct 61399 GCAAGAGTTCGGCCATCCTCTAACTGCTTTCCAGCAAAGATCAACCTTTGCTGATCTGGA 61458 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||| |||||||| || || || ||||| |||| ||||| || Sbjct 61459 GGAATTCCTTCCTTATCTTGGATCTTTGCCTTAACATTGTCGATAGTGTCTGAACTCTCA 61518 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||| |||||||| ||||| | || || | ||| || ||||| Sbjct 61519 ACCTCGAGAGTGATGGTTTTGCCAGTGAGGGTCTTTACAAAGATTTGCAT 61568 Score = 104 bits (114), Expect = 5e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| || || | | || | ||| | ||| | || || ||||| || ||| Sbjct 60883 ATACCACCCCTCAGCCTCAGCACCAGATGCAGAGTGGATTCCTTCTGAATATTGTAGTCA 60942 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || || |||| || | ||| || ||||||||||| || ||||| ||||| || Sbjct 60943 GCAAGAGTACGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGA 61002 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||||||||| || |||||| ||| ||||| || | ||| || || Sbjct 61003 GGAATGCCTTCTTTATCCTGGATTTTAGCTTTGACATTGTCAATTGTATCGGAACTCTCA 61062 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || ||||| || || || || || ||||| | ||| |||||||| Sbjct 61063 ACCTCAAGGGTAATAGTCTTTCCTGTCAAAGTTTTTACAAAGATCTGCAT 61112 Score = 102 bits (112), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 192328 ACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCC 192387 || ||||| | || | |||||| ||| |||||||||| | || | |||| || Sbjct 60448 ACCAAATGGAGGGTGGACTCTTTCTGGATGTTATAATCAGCAAGAGTCCTCCCATCCTCA 60507 Query 192388 AATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGT 192447 | || ||||||||||| ||||| | ||| || || || || || |||||||| ||||| Sbjct 60508 AGCTGCTTACCAGCAAAAATTAAACGCTGCTGGTCCGGGGGAATACCTTCTTTGTCTTGG 60567 Query 192448 ATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 192507 || || ||| |||||| || | |||||| || ||||| || || || || || Sbjct 60568 ATCTTTGCTTTCACATTATCAATTGTATCTGAACTCTCAACTTCCAGCGTGATTGTCTTC 60627 Query 192508 CCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || || || | ||| |||||||| Sbjct 60628 CCAGTCAACGTCTTCACAAAGATCTGCAT 60656 Score = 87.8 bits (96), Expect = 4e-12 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| || || |||| | || || |||| || | ||| || ||||||||||| || || Sbjct 61158 GATGTTGTAGTCAGCAAGGGTACGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAACCT 61217 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 || ||||| || || || ||||| || || || || || || |||||| || | Sbjct 61218 TTGCTGATCCGGAGGAATACCTTCCTTGTCCTGAATCTTTGCCTTAACATTATCAATTGT 61277 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 ||||| || || || ||||| || || || |||||||| ||||| | ||| ||||| Sbjct 61278 GTCTGAGCTCTCAACCTCGAGAGTGATAGTCTTCCCAGTTAAAGTTTTTACAAAGATCTG 61337 Query 192534 CAT 192536 ||| Sbjct 61338 CAT 61340 >seq19192 Length=430667 Score = 113 bits (124), Expect = 9e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 || ||||| | ||||| | || | || | |||| ||| ||| || ||||| ||||| Sbjct 373859 ATGCCACCACGTAGACGGAGGACAAGGTGGAGGGTAGACTCCTTTTGA-ATATTGTAATC 373917 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 || | ||||| |||| || | || || ||||||||||| | ||||| || || || Sbjct 373918 AGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCTGG 373977 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 || || ||||| || ||||| ||||| || || ||| || | ||||| || Sbjct 373978 AGGAATCCCTTCCTTGTCTTGAATTTTCGCCTTCACGTTATCAATTGTGTCTGAACTCTC 374037 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || |||||||||||||| ||||| | ||||||| |||||||||||| Sbjct 374038 GACCTCAAGAGTAATGGTTTTGCCAGTAAGAGTTTTAACAAATATCTGCAT 374088 Score = 100 bits (110), Expect = 6e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 |||||| ||||| | | || || |||| |||| || ||||||||||| || | || Sbjct 373222 GATATTGTAATCTGCAAGGGTGCGCCCATCCTCCAGCTGCTTACCAGCAAATATGAGCCT 373281 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||| ||||| ||||| || |||||||| || || ||||| || || || |||| Sbjct 373282 CTGCTGATCTGGTGGGATCCCTTCTTTGTCCTGAATTTTGGCCTTCACGTTGTCAATAGT 373341 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || || || ||||| | ||| ||||| || || || || ||||||| ||||||||| Sbjct 373342 GTCAGAGCTCTCCACTTCCAAAGTGATGGTCTTCCCTGTCAAAGTTTTAACAAATATCTG 373401 Query 192534 CAT 192536 ||| Sbjct 373402 CAT 373404 Score = 98.7 bits (108), Expect = 2e-15 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 || ||||| | ||||| | || | || | |||| ||| ||| || ||||| ||||| Sbjct 374087 ATGCCACCACGTAGACGGAGGACAAGGTGGAGGGTAGACTCCTTTTGA-ATATTGTAATC 374145 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 || | ||||| |||| || | || || ||||||||||| | ||||| || || || Sbjct 374146 AGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCTGG 374205 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 || || ||||| || ||||| ||||| || || ||| || | ||||| || Sbjct 374206 GGGAATCCCTTCCTTGTCTTGAATTTTGGCCTTCACGTTATCAATTGTGTCTGAACTCTC 374265 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||| |||||||| ||||| | ||| || | ||| |||||||| Sbjct 374266 AACCTCGAGAGTGATGGTTTTTCCAGTGAGTGTCTTCACAAAGATCTGCAT 374316 >seq3636 Length=134301 Score = 113 bits (124), Expect = 9e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || || || | ||| | || ||||| || || | |||||| |||||| |||||| Sbjct 16084 ATCCCTCCCCTCAAACGGAGCACCAAATGCAACGTGGACTCTTTCTGGATATTGTAATCA 16025 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || | |||| || | || |||||||||||||| |||| ||| ||||| ||| Sbjct 16024 GCAAGGGTCCTCCCATCCTCAAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATCTGGT 15965 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| || || ||||| ||| || | ||| || ||| Sbjct 15964 GGAATCCCTTCTTTATCTTGGATCTTCGCCTTTACGTTATCAATTGTATCAGAACTTTCG 15905 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | || || || || || || ||||| || | ||| |||||||| Sbjct 15904 ACCTCCAAGGTGATCGTCTTCCCTGTCAATGTCTTCACAAAGATCTGCAT 15855 Score = 96.9 bits (106), Expect = 7e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 192346 TCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAG 192405 ||||| ||| |||||||||| | || || |||| |||| || ||||||||||| Sbjct 16273 TCTTTCTGGATGTTATAATCAGCAAGGGTACGACCATCCTCCAGCTGCTTACCAGCAAAA 16214 Query 192406 ATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTA 192465 || || ||||| ||||| ||||| || || || || || || || || ||| || ||| Sbjct 16213 ATCAACCTCTGCTGATCTGGTGGAATACCCTCCTTGTCCTGAATCTTTGCTTTCACGTTA 16154 Query 192466 GTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATA 192525 |||| ||| || || || || | ||| || || || ||||||| || || | | Sbjct 16153 TCAATAGTATCAGAGCTCTCCACCTCCAAAGTGATAGTCTTCCCAGTTAGAGTCTTGACA 16094 Query 192526 AATATCTGCAT 192536 ||||||||||| Sbjct 16093 AATATCTGCAT 16083 Score = 86.0 bits (94), Expect = 1e-11 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439 |||| || | || || ||||||||||| || ||||| ||||| || || |||||||| | Sbjct 15327 CATCCTCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCGGGAGGGATTCCTTCCT 15268 Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499 | || || || ||| || |||||| |||| || || || || || ||||||| Sbjct 15267 TGTCCTGAATCTTAGCCTTGACATTATCAATAGTGTCGGAACTCTCAACCTCGAGAGTAA 15208 Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| || || | || || | ||| || ||||| Sbjct 15207 TGGTTTTTCCGGTGAGCGTCTTTACAAAGATTTGCAT 15171 >seq44697 Length=182102 Score = 96.9 bits (106), Expect = 7e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 49821 AAACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTT 49880 ||||| ||||||||| || ||||| ||||||||||| || || || || || ||| Sbjct 113268 AAACAAGCAAAATCACAGTGCAAACCTTCGTCCCTAGAAATTAACTCGTTCGAGAAGGTT 113327 Query 49881 AATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAG 49940 ||||| |||||||| || | |||||| | ||| ||||| | ||| || | || || Sbjct 113328 AATCCAGGCATTAACCCCCGCTTTTTTAACCAGAATATAGCACAAAAGCTTCCGGAGAAA 113387 Query 49941 AATATACCCTCGACACACGCAAATGC 49966 || ||||| || ||||| |||||||| Sbjct 113388 AAAATACCTTCCACACAAGCAAATGC 113413 >seq38302 Length=59671 Score = 93.3 bits (102), Expect = 8e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 49821 AAACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTT 49880 ||||| || |||||| || ||||| |||||||| || || || || || |||||| Sbjct 23088 AAACAAGCGAAATCACAGTGCAAACCTTCGTCCCTTGAAATTAACTCGTTCGAGAAAGTT 23147 Query 49881 AATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAG 49940 ||||| |||||||| || | |||||| | ||| ||||| | ||| || | ||| || Sbjct 23148 AATCCAGGCATTAACCCCCGCTTTTTTAACCAGAATATAGCACAAAAGCTTCCAGAGAAA 23207 Query 49941 AATATACCCTCGACACACGCAAATGC 49966 || ||||| || ||||| | |||||| Sbjct 23208 AAAATACCTTCCACACAAGAAAATGC 23233 >seq33627 Length=115891 Score = 91.5 bits (100), Expect = 3e-13 Identities = 159/230 (69%), Gaps = 1/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||||| | || | ||| | |||| || || ||| || || ||| Sbjct 49979 ATACCACCACGGAGACGGAGGACAAGATGGAGGGTAGATTCCTTTTGGATGTTGTAGTCA 49920 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | ||||| |||| || | ||||| ||||||||||| | ||||| |||||||| Sbjct 49919 GCAAGAGTTCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGCCTCTGCTGATCAGGA 49860 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || | | | || || ||||| || ||| ||| ||| | || | || || || Sbjct 49859 GG-AATGCATCCTTGTCTTGAATCTTAACTTTGACACTGTCAATGGTGTCAGAACTCTCG 49801 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||||||||| || ||||| | ||| |||| ||| ||| |||| Sbjct 49800 ACCTCAAGAGTAATGGTCTTTCCAGTGAGTGTCTTAACAAAGATCGGCAT 49751 Score = 91.5 bits (100), Expect = 3e-13 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||||||||| | || | ||| | || | |||||| || || | ||| Sbjct 50429 ATGCCACCTCTAAGACGAAGAACAAGATGCAGGGTTGACTCTTTCTGAATGTTGTGATCT 50370 Query 192367 GATAATGTTCGTTCATCATC--CAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAG 192424 | ||||| | | || || | ||| || || |||||||| | |||||| || | | Sbjct 50369 GCCAATGTCCTCCCGTCCTCTTAAGTTGCTTCCCTGCAAAGATCAGTCTCTGCTGGCCTG 50310 Query 192425 GTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATT 192484 | || || ||||| || ||||| || || ||||||||| |||| |||||| || Sbjct 50309 GAGGAATACCTTCCTTGTCTTGAATCTTTGCTTTTACATTGTCGATAGTATCTGAACTTT 50250 Query 192485 CTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 | ||||| || | ||||| || || || | ||| || | ||| |||||||| Sbjct 50249 CAACTTCAAGGATGATGGTCTTGCCGGTAAGTGTCTTGACAAAGATCTGCAT 50198 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || || || | ||| || || ||||| | ||| ||||| || ||| ||||| || Sbjct 50657 ATCCCTCCCCTCAAACGCAAGACCAAATGGAGAGTCGCCTCCTTCTGGATGTTATAGTCC 50598 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || | | || |||| |||||||||||||||||| || | ||| || || || Sbjct 50597 GCAAGAGTCCTGCCGTCCTCCAGTTGTTTACCAGCAAAGATCAAACGCTGCTGGTCTGGC 50538 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || ||||| || || ||| ||||| || | ||| || || Sbjct 50537 GGGATACCCTCCTTGTCTTGAATCTTTGCTTTGACATTGTCAATGGTATCAGAACTCTCA 50478 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | ||| || || || ||||| || || || | ||| || ||||| Sbjct 50477 ACCTCCAAAGTTATTGTCTTCCCAGTCAAAGTCTTGACAAAAATATGCAT 50428 >seq48356 Length=183133 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 192433 CCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCT 192492 |||||||| ||||||||||| ||| ||||| || | ||| ||||| ||||| Sbjct 106515 CCTTCTTTGTCTTGTATTTTGGCTTTAACATTGTCGATTGTATCACTGGATTCAACTTCG 106456 Query 192493 AGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||||| |||||||||||||| | ||||| | |||||||||||||| Sbjct 106455 AGAGTTATGGTTTTACCAGTGAGAGTTTTCACGAATATCTGCATTTT 106409 >seq3114 Length=370656 Score = 84.2 bits (92), Expect = 4e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 |||||| || |||| || |||||| |||| || | || ||||| || || || || | Sbjct 9901 GATATTGTAGTCAGCTAGTGTTCGGCCATCCTCAAGCTGCTTACCTGCGAAAATCAACCG 9960 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||| || || || || |||||||| || || || || ||| || ||||| || | Sbjct 9961 CTGCTGGTCTGGAGGAATTCCTTCCTTGTCCTGAATCTTAGCCTTGACATTGTCAATGGT 10020 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || || || ||||| |||| ||||| || || || || | || || | |||||||| Sbjct 10021 GTCCGATGACTCTACCTCTAAGGTAATAGTCTTCCCCGTCAGGGTCTTCACGAATATCTG 10080 Query 192534 CATTTT 192539 ||| || Sbjct 10081 CATCTT 10086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 983809862002800