Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06]
53,128 sequences; 1,222,768,627 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq51452 147 4e-30
seq50758 113 8e-20
seq44697 109 1e-18
seq19192 104 4e-17
seq38302 102 1e-16
seq32633 100 5e-16
seq3636 100 5e-16
seq48356 95.1 2e-14
seq33627 91.5 3e-13
>seq51452
Length=252770
Score = 147 bits (162), Expect = 4e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| ||||| | ||| || | |||| || | || | ||| || |||||||||||||
Sbjct 58897 ATTCCACCACGAAGGCGGAGGACTAGGTGGAGTGTTGACTCCTTTTGAATATTATAATCT 58956
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| | || || | || |||||||| || ||||||||||| | ||| |||||||| |||
Sbjct 58957 GCCAGAGTGCGCCCATCTTCCAATTGCTTCCCAGCAAAAATCAGTCTTTGTTGGTCCGGT 59016
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| |||||||| ||||| | || |||||| |||||||| || ||
Sbjct 59017 GGAATACCTTCCTTATCTTGAATTTTCGTCTTAACATTATCAATAGTATCCGAGCTCTCA 59076
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| | || || ||||| || ||||||||||||| ||| || ||||||
Sbjct 59077 ACTTCCAACGTGATTGTTTTTCCGGTTAATGTTTTAACGAAAATTTGCATT 59127
Score = 114 bits (126), Expect = 2e-20
Identities = 169/238 (71%), Gaps = 1/238 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| ||||| || || | | |||| || | ||| | ||| || |||||||||||||
Sbjct 4748 ATTCCACCCCTTAGCCTGAGAACTAGGTGGAGAGTTGACTCCTTTTGAATATTATAATCT 4807
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| | || || | || |||| ||| || || ||||| || | ||||| || || |||
Sbjct 4808 GCGAGAGTACGCCCATCTTCCAGTTGCTTCCCTGCAAATATCAGCCTCTGCTGATCCGGT 4867
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || || || ||||||||||| || ||||| ||| || || || |||
Sbjct 4868 GGGATACCCTCCTTGTCTTGTATTTTCGCCTTAACATTGTCTATGGTGTCCGAGCTTTCA 4927
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT-TTTATTA 172076
||||| || || |||||||| ||||||| ||||||| || |||||||| | |||||
Sbjct 4928 ACTTCCAGTGTGATGGTTTTTCCAGTTAGGGTTTTAACAAAGATCTGCATCTGTATTA 4985
Score = 105 bits (116), Expect = 1e-17
Identities = 133/183 (73%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
|| |||||||| | | || || | | || || ||||| || ||||||||||| || |||
Sbjct 58717 ATGTTATAATCAGCCAGAGTTCTTCCATCTTCTAATTGCTTCCCAGCAAAAATCAACCTC 58776
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|| || |||||||| || || || || ||||| |||||| || ||||| ||| ||
Sbjct 58777 TGCTGATCAGGTGGGATACCCTCCTTGTCTTGAATTTTAGACTTAACATTGTCTATCGTG 58836
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
|| || || ||||| | || || ||||| |||||||| || |||| || || |||
Sbjct 58837 TCCGAGCTCTCAACTTCCAACGTGATTGTTTTTCCAGTTAAGGTCTTAACAAAAATTTGC 58896
Query 172068 ATT 172070
|||
Sbjct 58897 ATT 58899
Score = 96.9 bits (106), Expect = 6e-15
Identities = 131/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
|| |||||||| | | | || | | || || ||||| || ||||| ||||| | |||
Sbjct 4340 ATGTTATAATCAGCCAGCGTTCTTCCATCTTCTAATTGCTTCCCAGCGAAAATCAGCCTC 4399
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|| ||||| || | || ||||| |||||||| ||||| || |||||| || ||
Sbjct 4400 TGCTGGTCTGGCGCGATACCTTCCTTATCTTGGATTTTCGCCTTAACATTATCAATTGTG 4459
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
|| || || ||||| | ||||||||||| || ||||| ||||||| || || |||
Sbjct 4460 TCCGAGCTCTCAACTTCCAATGTAATGGTTTTCCCGGTTAAGGTTTTAACAAAGATTTGC 4519
Query 172068 ATT 172070
|||
Sbjct 4520 ATT 4522
Score = 93.3 bits (102), Expect = 8e-14
Identities = 114/156 (73%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974
|| ||||| ||||| |||||||| || | ||||| ||||| || || || |||||||||
Sbjct 58060 TCCTCCAACTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCCGGCGGAATACCTTCTTTA 58119
Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034
|| ||||| || || ||||| || || ||||| || ||||| | || |||
Sbjct 58120 TCCTGTATCTTCGCCTTCACATTGTCAATCGTGTCTGAGCTCTCAACTTCCAATGTGATG 58179
Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
|| || || ||||| ||||||| || || ||||||
Sbjct 58180 GTCTTTCCCGTTAAGGTTTTAACAAAGATTTGCATT 58215
Score = 87.8 bits (96), Expect = 3e-12
Identities = 129/183 (70%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
|||||||||||||| | || | | | || ||||||||||| || |||||||| | |||
Sbjct 58488 AATATTATAATCTGCGAGAGTCCTTCCATCTTCCAATTGTTTCCCTGCAAAAATCAGTCT 58547
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
||| ||||| ||||| || || || ||||| ||||| || || ||||| || ||
Sbjct 58548 CTGCTGGTCTGGTGGGATACCCTCCTTATCCTGTATCTTGGCCTTCACATTGTCAATGGT 58607
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
||| || || || || | || || || || || || || || || | || | |||
Sbjct 58608 ATCAGAACTCTCCACCTCCAACGTGATCGTCTTCCCCGTCAACGTCTTCACAAAGACCTG 58667
Query 172067 CAT 172069
|||
Sbjct 58668 CAT 58670
Score = 86.0 bits (94), Expect = 1e-11
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974
|| ||||||||||| || |||||||| | |||||| ||||| ||||| || || || |||
Sbjct 4139 TCTTCCAATTGTTTCCCTGCAAAAATCAGTCTCTGCTGGTCTGGTGGGATACCCTCCTTA 4198
Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034
|| ||||| || || ||||| || ||||| || || ||||| | || ||
Sbjct 4199 TCCTGTATCTTGGCCTTCACATTGTCAATGGTATCAGAACTCTCCACTTCCAACGTGATC 4258
Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || ||||| || || | || ||||||||
Sbjct 4259 GTCTTCCCCGTTAACGTCTTCACAAAGATCTGCAT 4293
>seq50758
Length=122349
Score = 113 bits (124), Expect = 8e-20
Identities = 134/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
||||||||||| | ||||| || | || ||||| || ||||||||||| || || |||
Sbjct 118673 ATATTATAATCAGCTAAAGTTCTCCCATCTTCCAACTGCTTACCAGCAAAGATCAACCTC 118614
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|| ||||| ||||| || || || || || || || || || ||||| ||||||
Sbjct 118613 TGCTGGTCTGGTGGGATACCCTCCTTGTCCTGAATCTTCGCCTTAACATTGTCAATAGTA 118554
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
|| || ||| ||||| || || || || || ||||| | |||||| | ||| ||||||
Sbjct 118553 TCGGAGCTTTCGACTTCGAGGGTGATAGTCTTCCCAGTGAGTGTTTTGACGAAGATCTGC 118494
Query 172068 AT 172069
||
Sbjct 118493 AT 118492
Score = 91.5 bits (100), Expect = 3e-13
Identities = 130/183 (71%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
|||||||||||| | | || | | | || |||||||| || || ||||| || | ||
Sbjct 118902 AATATTATAATCAGCCAGAGTCCTTCCATCTTCCAATTGCTTCCCCGCAAAGATCAGCCT 118843
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
||| || || || || || || || || || || || ||| ||| ||||| |||||
Sbjct 118842 CTGCTGATCCGGGGGAATACCCTCCTTGTCCTGAATCTTAGCTTTCACATTGTCAATAGT 118783
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
||| || ||| || || | ||| |||||||| || || || ||||| | || |||||
Sbjct 118782 ATCAGAACTTTCCACCTCCAAAGTGATGGTTTTCCCGGTCAACGTTTTCACAAAAATCTG 118723
Query 172067 CAT 172069
|||
Sbjct 118722 CAT 118720
>seq44697
Length=182102
Score = 109 bits (120), Expect = 1e-18
Identities = 289/439 (66%), Gaps = 7/439 (2%)
Strand=Plus/Plus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
||||| || || |||| | || || || || || || || |||| ||| || |
Sbjct 112980 TTTTGATACTCCCCAACTCTCTTCTCAAAGAAATTAGTCTTCCCTTGTAAACTAATCAGC 113039
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATATAAT 38951
| ||| ||||||| ||||| | | ||| || | || || ||| ||| ||
Sbjct 113040 TCCATCCAATCAAACGGATTCTGAGCATTGTACAACTTATCATAACCCAAAGCATCCAAC 113099
Query 38952 AATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAAT 39011
|||||||| ||||||||||||| |||| ||| || || | |||||| |||| |
Sbjct 113100 AATCTATCAGCCACAAATTCAATGTATTTGCTCATCAAATCTCCATTCATTCCCACCAGC 113159
Query 39012 TTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattatc 39071
| | || | |||||| | ||| || ||||||| || ||||| | | || ||
Sbjct 113160 GCACAAGGCAGCGCATCACACACAAACTCCCTTTCTATCTCCACAGCATCTGCAACAATT 113219
Query 39072 ataattatattattttttgataa--tttatatttaatatgattcgcatataGTAAACATG 39129
||| | || | ||| || | |||| | | ||| || ||||| |
Sbjct 113220 CCC-TTAACTCGTTCCTCAGTAAGCTTCGTCCTTAACAAACT----ATAAAGCAAACAAG 113274
Query 39130 CAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTG 39189
||||||| || ||||||||||||||||| || || || || || |||||||| |
Sbjct 113275 CAAAATCACAGTGCAAACCTTCGTCCCTAGAAATTAACTCGTTCGAGAAGGTTAATCCAG 113334
Query 39190 GCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATAC 39249
||||||| || | |||||| | ||| ||||| | ||| || | || || || ||||
Sbjct 113335 GCATTAACCCCCGCTTTTTTAACCAGAATATAGCACAAAAGCTTCCGGAGAAAAAAATAC 113394
Query 39250 CCTCCACACACGCAAATGC 39268
| |||||||| ||||||||
Sbjct 113395 CTTCCACACAAGCAAATGC 113413
>seq19192
Length=430667
Score = 104 bits (114), Expect = 4e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 171873 GTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCA 171932
|||| ||| || |||||| ||||| | | || ||| | || || | || || |||
Sbjct 373892 GTAGACTCCTTTTGAATATTGTAATCAGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCA 373951
Query 171933 GCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTT 171992
||||| || | ||||| ||||| || || || ||||| || ||||| ||||| ||
Sbjct 373952 GCAAAGATCAGCCTCTGCTGGTCTGGAGGAATCCCTTCCTTGTCTTGAATTTTCGCCTTC 374011
Query 171993 ACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTT 172052
|| ||| || || ||||| || || || |||||||||||||| ||||| | |||
Sbjct 374012 ACGTTATCAATTGTGTCTGAACTCTCGACCTCAAGAGTAATGGTTTTGCCAGTAAGAGTT 374071
Query 172053 TTAATGAATATCTGCAT 172069
|||| |||||||||||
Sbjct 374072 TTAACAAATATCTGCAT 374088
Score = 89.7 bits (98), Expect = 9e-13
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
||||| ||||||| | | || | || |||| || ||||||||||| || | |||
Sbjct 373223 ATATTGTAATCTGCAAGGGTGCGCCCATCCTCCAGCTGCTTACCAGCAAATATGAGCCTC 373282
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|| || || ||||| || |||||||| || || ||||| || || || |||||
Sbjct 373283 TGCTGATCTGGTGGGATCCCTTCTTTGTCCTGAATTTTGGCCTTCACGTTGTCAATAGTG 373342
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
|| || || ||||| | ||| ||||| || || || || ||||||| |||||||||
Sbjct 373343 TCAGAGCTCTCCACTTCCAAAGTGATGGTCTTCCCTGTCAAAGTTTTAACAAATATCTGC 373402
Query 172068 AT 172069
||
Sbjct 373403 AT 373404
>seq38302
Length=59671
Score = 102 bits (112), Expect = 1e-16
Identities = 291/442 (66%), Gaps = 13/442 (3%)
Strand=Plus/Plus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
||||| || || |||| | || || || || || || || |||| ||| || |
Sbjct 22800 TTTTGATACTCCCCAACTCTCTTCTCAAAGAAATTAGTCTTCCCTTGTAAACTAATCAGC 22859
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTT-TTCT--CCTATCAATACATAT 38948
| ||| ||||||| ||||| | | ||| || | || || | || ||| |||
Sbjct 22860 TCCATCCAATCAAACGGATTCTGAGCATTGTACAACTTATTATAACC---CAAAGCATCC 22916
Query 38949 AATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAAT 39008
|| |||||||| ||||||||||||| |||| ||| || || | |||||| ||||
Sbjct 22917 AACAATCTATCAGCCACAAATTCAATGTATTTGCTCATCAAATCTCCATTCATTCCCACC 22976
Query 39009 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatt 39068
| | | || | |||||| | ||| || ||||||| || ||||| | | ||
Sbjct 22977 AGCGCACAAGGCAGCGCATCACACACAAACTCCCTTTCTATCTCCACAGCATCTGCAACA 23036
Query 39069 atcataattatattattttttgataa--tttatatttaatatgattcgcatataGTAAAC 39126
||| ||| | || | ||| || | | || | | ||| || ||||
Sbjct 23037 ATCCCC-TTAACTCGTTCCTCAGTAAGCTTCGTCCTCAACAAACT----ATAAAGCAAAC 23091
Query 39127 ATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATC 39186
| || ||||| || |||||||||||||| || || || || || ||||||||||
Sbjct 23092 AAGCGAAATCACAGTGCAAACCTTCGTCCCTTGAAATTAACTCGTTCGAGAAAGTTAATC 23151
Query 39187 CTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATA 39246
| |||||||| || | |||||| | ||| ||||| | ||| || | ||| || || |
Sbjct 23152 CAGGCATTAACCCCCGCTTTTTTAACCAGAATATAGCACAAAAGCTTCCAGAGAAAAAAA 23211
Query 39247 TACCCTCCACACACGCAAATGC 39268
|||| |||||||| | ||||||
Sbjct 23212 TACCTTCCACACAAGAAAATGC 23233
>seq32633
Length=132462
Score = 100 bits (110), Expect = 5e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| || || || | || ||||| | || | || || || || |||||
Sbjct 60655 ATACCACCCCTCAGGCGCAGCACCAAATGGAGGGTTGATTCCTTTTGGATGTTGTAATCA 60714
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| || | | | | || || | || || ||||||||||| | ||||| |||||||||
Sbjct 60715 GCTAGTGTCCTTCCATCCTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCAGGT 60774
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| |||||||| ||||| || ||||| || || || || ||
Sbjct 60775 GGAATCCCTTCCTTATCTTGAATTTTTGCCTTAACATTGTCGATGGTGTCCGAGCTCTCA 60834
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| |||||||| ||||| ||||| || ||||| | || || |||||
Sbjct 60835 ACTTCAAGAGTAATAGTTTTCCCAGTCAAGGTTTTCACAAAGATTTGCAT 60884
Score = 98.7 bits (108), Expect = 2e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 171861 ACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCC 171920
|| ||||| | || | |||||| || |||||||| | | || | | || ||
Sbjct 60448 ACCAAATGGAGGGTGGACTCTTTCTGGATGTTATAATCAGCAAGAGTCCTCCCATCCTCA 60507
Query 171921 AATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGT 171980
| || ||||||||||||||||| | ||| ||||| || || || |||||||| |||||
Sbjct 60508 AGCTGCTTACCAGCAAAAATTAAACGCTGCTGGTCCGGGGGAATACCTTCTTTGTCTTGG 60567
Query 171981 ATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 172040
|| || ||| |||||| || |||||||| || ||||| || || || || ||
Sbjct 60568 ATCTTTGCTTTCACATTATCAATTGTATCTGAACTCTCAACTTCCAGCGTGATTGTCTTC 60627
Query 172041 CCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| || || || | || ||||||||
Sbjct 60628 CCAGTCAACGTCTTCACAAAGATCTGCAT 60656
Score = 91.5 bits (100), Expect = 3e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| || || | | || | ||| | ||| | || || |||||| || ||
Sbjct 60883 ATACCACCCCTCAGCCTCAGCACCAGATGCAGAGTGGATTCCTTCTGAATATTGTAGTCA 60942
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| | || || | || || | ||| || |||||||| || || ||||| || || ||
Sbjct 60943 GCAAGAGTACGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGA 61002
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||||||||| || |||||| ||| ||||| || ||||| || ||
Sbjct 61003 GGAATGCCTTCTTTATCCTGGATTTTAGCTTTGACATTGTCAATTGTATCGGAACTCTCA 61062
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || ||||| || || || || || ||||| | || ||||||||
Sbjct 61063 ACCTCAAGGGTAATAGTCTTTCCTGTCAAAGTTTTTACAAAGATCTGCAT 61112
>seq3636
Length=134301
Score = 100 bits (110), Expect = 5e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| || || || | || | || | || | ||| || |||||| || ||
Sbjct 15856 ATACCACCCCTCAGCCGAAGAACAAGGTGGAGGGTGGACTCCTTTTGAATATTGTAGTCG 15797
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| | || |||| | || || | || || ||||||||||| |||||||| ||||| ||
Sbjct 15796 GCAAGAGTTCGTCCATCCTCAAGCTGCTTTCCAGCAAAAATCAATCTCTGCTGGTCTGGA 15737
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || || || || || || ||||| || || || || ||
Sbjct 15736 GGGATGCCTTCCTTGTCCTGGATCTTCGCCTTAACATTGTCAATGGTGTCCGAGCTCTCA 15677
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| || || ||||| || ||||| ||||| |||| ||| ||||||||
Sbjct 15676 ACTTCGAGGGTGATGGTCTTCCCAGTCAATGTCTTAACGAAAATCTGCAT 15627
Score = 87.8 bits (96), Expect = 3e-12
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 171861 ACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCG-TCATC 171919
|| ||||| || || | |||||| ||||| ||||| | || | || | | || ||
Sbjct 16063 ACCAAATGCAACGTGGACTCTTTCTGGATATTGTAATCAGC-AAGGGTCCTCCCATCCTC 16005
Query 171920 CAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTG 171979
| || ||||||||||| || |||| ||| || || ||||| || ||||||||||||||
Sbjct 16004 AAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATCTGGTGGAATCCCTTCTTTATCTTG 15945
Query 171980 TATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTT 172039
|| || ||||| ||| || ||||| || ||| || || | || || || ||
Sbjct 15944 GATCTTCGCCTTTACGTTATCAATTGTATCAGAACTTTCGACCTCCAAGGTGATCGTCTT 15885
Query 172040 ACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || ||||| || | || ||||||||
Sbjct 15884 CCCTGTCAATGTCTTCACAAAGATCTGCAT 15855
>seq48356
Length=183133
Score = 95.1 bits (104), Expect = 2e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 171966 CCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCT 172025
|||||||| ||||||||||| ||| ||||| || ||||| ||||| |||||
Sbjct 106515 CCTTCTTTGTCTTGTATTTTGGCTTTAACATTGTCGATTGTATCACTGGATTCAACTTCG 106456
Query 172026 AGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||| |||||||||||||| | ||||| | |||||||||||||||
Sbjct 106455 AGAGTTATGGTTTTACCAGTGAGAGTTTTCACGAATATCTGCATTTT 106409
>seq33627
Length=115891
Score = 91.5 bits (100), Expect = 3e-13
Identities = 160/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| ||||||||||| || | || | ||| | || | |||||| ||| || | ||||
Sbjct 50429 ATGCCACCTCTAAGACGAAGAACAAGATGCAGGGTTGACTCTTTCTGAATGTTGTGATCT 50370
Query 171900 GATAAAGATCGTTCGTCATCCAA--TTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAG 171957
| || | | |||| || | ||| || || ||||| || | |||||| ||| | |
Sbjct 50369 GCCAATGTCCTCCCGTCCTCTTAAGTTGCTTCCCTGCAAAGATCAGTCTCTGCTGGCCTG 50310
Query 171958 GTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATT 172017
| || || ||||| || ||||| || || ||||||||| ||||||||||| ||
Sbjct 50309 GAGGAATACCTTCCTTGTCTTGAATCTTTGCTTTTACATTGTCGATAGTATCTGAACTTT 50250
Query 172018 CTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
| ||||| || | ||||| || || || | ||| || | || ||||||||
Sbjct 50249 CAACTTCAAGGATGATGGTCTTGCCGGTAAGTGTCTTGACAAAGATCTGCAT 50198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 904534899182400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |