Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06] 53,128 sequences; 1,222,768,627 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq51452 147 4e-30 seq50758 113 8e-20 seq44697 109 1e-18 seq19192 104 4e-17 seq38302 102 1e-16 seq32633 100 5e-16 seq3636 100 5e-16 seq48356 95.1 2e-14 seq33627 91.5 3e-13 >seq51452 Length=252770 Score = 147 bits (162), Expect = 4e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | ||| || | |||| || | || | ||| || ||||||||||||| Sbjct 58897 ATTCCACCACGAAGGCGGAGGACTAGGTGGAGTGTTGACTCCTTTTGAATATTATAATCT 58956 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || || | || |||||||| || ||||||||||| | ||| |||||||| ||| Sbjct 58957 GCCAGAGTGCGCCCATCTTCCAATTGCTTCCCAGCAAAAATCAGTCTTTGTTGGTCCGGT 59016 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| ||||| | || |||||| |||||||| || || Sbjct 59017 GGAATACCTTCCTTATCTTGAATTTTCGTCTTAACATTATCAATAGTATCCGAGCTCTCA 59076 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| | || || ||||| || ||||||||||||| ||| || |||||| Sbjct 59077 ACTTCCAACGTGATTGTTTTTCCGGTTAATGTTTTAACGAAAATTTGCATT 59127 Score = 114 bits (126), Expect = 2e-20 Identities = 169/238 (71%), Gaps = 1/238 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| || || | | |||| || | ||| | ||| || ||||||||||||| Sbjct 4748 ATTCCACCCCTTAGCCTGAGAACTAGGTGGAGAGTTGACTCCTTTTGAATATTATAATCT 4807 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || || | || |||| ||| || || ||||| || | ||||| || || ||| Sbjct 4808 GCGAGAGTACGCCCATCTTCCAGTTGCTTCCCTGCAAATATCAGCCTCTGCTGATCCGGT 4867 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || || || ||||||||||| || ||||| ||| || || || ||| Sbjct 4868 GGGATACCCTCCTTGTCTTGTATTTTCGCCTTAACATTGTCTATGGTGTCCGAGCTTTCA 4927 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT-TTTATTA 172076 ||||| || || |||||||| ||||||| ||||||| || |||||||| | ||||| Sbjct 4928 ACTTCCAGTGTGATGGTTTTTCCAGTTAGGGTTTTAACAAAGATCTGCATCTGTATTA 4985 Score = 105 bits (116), Expect = 1e-17 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || |||||||| | | || || | | || || ||||| || ||||||||||| || ||| Sbjct 58717 ATGTTATAATCAGCCAGAGTTCTTCCATCTTCTAATTGCTTCCCAGCAAAAATCAACCTC 58776 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || || |||||||| || || || || ||||| |||||| || ||||| ||| || Sbjct 58777 TGCTGATCAGGTGGGATACCCTCCTTGTCTTGAATTTTAGACTTAACATTGTCTATCGTG 58836 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || || ||||| | || || ||||| |||||||| || |||| || || ||| Sbjct 58837 TCCGAGCTCTCAACTTCCAACGTGATTGTTTTTCCAGTTAAGGTCTTAACAAAAATTTGC 58896 Query 172068 ATT 172070 ||| Sbjct 58897 ATT 58899 Score = 96.9 bits (106), Expect = 6e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || |||||||| | | | || | | || || ||||| || ||||| ||||| | ||| Sbjct 4340 ATGTTATAATCAGCCAGCGTTCTTCCATCTTCTAATTGCTTCCCAGCGAAAATCAGCCTC 4399 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || ||||| || | || ||||| |||||||| ||||| || |||||| || || Sbjct 4400 TGCTGGTCTGGCGCGATACCTTCCTTATCTTGGATTTTCGCCTTAACATTATCAATTGTG 4459 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || || ||||| | ||||||||||| || ||||| ||||||| || || ||| Sbjct 4460 TCCGAGCTCTCAACTTCCAATGTAATGGTTTTCCCGGTTAAGGTTTTAACAAAGATTTGC 4519 Query 172068 ATT 172070 ||| Sbjct 4520 ATT 4522 Score = 93.3 bits (102), Expect = 8e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||| ||||| |||||||| || | ||||| ||||| || || || ||||||||| Sbjct 58060 TCCTCCAACTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCCGGCGGAATACCTTCTTTA 58119 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || ||||| || || ||||| || || ||||| || ||||| | || ||| Sbjct 58120 TCCTGTATCTTCGCCTTCACATTGTCAATCGTGTCTGAGCTCTCAACTTCCAATGTGATG 58179 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || || || ||||| ||||||| || || |||||| Sbjct 58180 GTCTTTCCCGTTAAGGTTTTAACAAAGATTTGCATT 58215 Score = 87.8 bits (96), Expect = 3e-12 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||||||||||| | || | | | || ||||||||||| || |||||||| | ||| Sbjct 58488 AATATTATAATCTGCGAGAGTCCTTCCATCTTCCAATTGTTTCCCTGCAAAAATCAGTCT 58547 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| ||||| ||||| || || || ||||| ||||| || || ||||| || || Sbjct 58548 CTGCTGGTCTGGTGGGATACCCTCCTTATCCTGTATCTTGGCCTTCACATTGTCAATGGT 58607 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||| || || || || | || || || || || || || || || | || | ||| Sbjct 58608 ATCAGAACTCTCCACCTCCAACGTGATCGTCTTCCCCGTCAACGTCTTCACAAAGACCTG 58667 Query 172067 CAT 172069 ||| Sbjct 58668 CAT 58670 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||||||||| || |||||||| | |||||| ||||| ||||| || || || ||| Sbjct 4139 TCTTCCAATTGTTTCCCTGCAAAAATCAGTCTCTGCTGGTCTGGTGGGATACCCTCCTTA 4198 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || ||||| || || ||||| || ||||| || || ||||| | || || Sbjct 4199 TCCTGTATCTTGGCCTTCACATTGTCAATGGTATCAGAACTCTCCACTTCCAACGTGATC 4258 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || ||||| || || | || |||||||| Sbjct 4259 GTCTTCCCCGTTAACGTCTTCACAAAGATCTGCAT 4293 >seq50758 Length=122349 Score = 113 bits (124), Expect = 8e-20 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 ||||||||||| | ||||| || | || ||||| || ||||||||||| || || ||| Sbjct 118673 ATATTATAATCAGCTAAAGTTCTCCCATCTTCCAACTGCTTACCAGCAAAGATCAACCTC 118614 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || ||||| ||||| || || || || || || || || || ||||| |||||| Sbjct 118613 TGCTGGTCTGGTGGGATACCCTCCTTGTCCTGAATCTTCGCCTTAACATTGTCAATAGTA 118554 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || ||| ||||| || || || || || ||||| | |||||| | ||| |||||| Sbjct 118553 TCGGAGCTTTCGACTTCGAGGGTGATAGTCTTCCCAGTGAGTGTTTTGACGAAGATCTGC 118494 Query 172068 AT 172069 || Sbjct 118493 AT 118492 Score = 91.5 bits (100), Expect = 3e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||||||||| | | || | | | || |||||||| || || ||||| || | || Sbjct 118902 AATATTATAATCAGCCAGAGTCCTTCCATCTTCCAATTGCTTCCCCGCAAAGATCAGCCT 118843 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| || || || || || || || || || || || ||| ||| ||||| ||||| Sbjct 118842 CTGCTGATCCGGGGGAATACCCTCCTTGTCCTGAATCTTAGCTTTCACATTGTCAATAGT 118783 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||| || ||| || || | ||| |||||||| || || || ||||| | || ||||| Sbjct 118782 ATCAGAACTTTCCACCTCCAAAGTGATGGTTTTCCCGGTCAACGTTTTCACAAAAATCTG 118723 Query 172067 CAT 172069 ||| Sbjct 118722 CAT 118720 >seq44697 Length=182102 Score = 109 bits (120), Expect = 1e-18 Identities = 289/439 (66%), Gaps = 7/439 (2%) Strand=Plus/Plus Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891 ||||| || || |||| | || || || || || || || |||| ||| || | Sbjct 112980 TTTTGATACTCCCCAACTCTCTTCTCAAAGAAATTAGTCTTCCCTTGTAAACTAATCAGC 113039 Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATATAAT 38951 | ||| ||||||| ||||| | | ||| || | || || ||| ||| || Sbjct 113040 TCCATCCAATCAAACGGATTCTGAGCATTGTACAACTTATCATAACCCAAAGCATCCAAC 113099 Query 38952 AATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAAT 39011 |||||||| ||||||||||||| |||| ||| || || | |||||| |||| | Sbjct 113100 AATCTATCAGCCACAAATTCAATGTATTTGCTCATCAAATCTCCATTCATTCCCACCAGC 113159 Query 39012 TTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattatc 39071 | | || | |||||| | ||| || ||||||| || ||||| | | || || Sbjct 113160 GCACAAGGCAGCGCATCACACACAAACTCCCTTTCTATCTCCACAGCATCTGCAACAATT 113219 Query 39072 ataattatattattttttgataa--tttatatttaatatgattcgcatataGTAAACATG 39129 ||| | || | ||| || | |||| | | ||| || ||||| | Sbjct 113220 CCC-TTAACTCGTTCCTCAGTAAGCTTCGTCCTTAACAAACT----ATAAAGCAAACAAG 113274 Query 39130 CAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTG 39189 ||||||| || ||||||||||||||||| || || || || || |||||||| | Sbjct 113275 CAAAATCACAGTGCAAACCTTCGTCCCTAGAAATTAACTCGTTCGAGAAGGTTAATCCAG 113334 Query 39190 GCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATAC 39249 ||||||| || | |||||| | ||| ||||| | ||| || | || || || |||| Sbjct 113335 GCATTAACCCCCGCTTTTTTAACCAGAATATAGCACAAAAGCTTCCGGAGAAAAAAATAC 113394 Query 39250 CCTCCACACACGCAAATGC 39268 | |||||||| |||||||| Sbjct 113395 CTTCCACACAAGCAAATGC 113413 >seq19192 Length=430667 Score = 104 bits (114), Expect = 4e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 171873 GTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCA 171932 |||| ||| || |||||| ||||| | | || ||| | || || | || || ||| Sbjct 373892 GTAGACTCCTTTTGAATATTGTAATCAGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCA 373951 Query 171933 GCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTT 171992 ||||| || | ||||| ||||| || || || ||||| || ||||| ||||| || Sbjct 373952 GCAAAGATCAGCCTCTGCTGGTCTGGAGGAATCCCTTCCTTGTCTTGAATTTTCGCCTTC 374011 Query 171993 ACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTT 172052 || ||| || || ||||| || || || |||||||||||||| ||||| | ||| Sbjct 374012 ACGTTATCAATTGTGTCTGAACTCTCGACCTCAAGAGTAATGGTTTTGCCAGTAAGAGTT 374071 Query 172053 TTAATGAATATCTGCAT 172069 |||| ||||||||||| Sbjct 374072 TTAACAAATATCTGCAT 374088 Score = 89.7 bits (98), Expect = 9e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 ||||| ||||||| | | || | || |||| || ||||||||||| || | ||| Sbjct 373223 ATATTGTAATCTGCAAGGGTGCGCCCATCCTCCAGCTGCTTACCAGCAAATATGAGCCTC 373282 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || || || ||||| || |||||||| || || ||||| || || || ||||| Sbjct 373283 TGCTGATCTGGTGGGATCCCTTCTTTGTCCTGAATTTTGGCCTTCACGTTGTCAATAGTG 373342 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || || ||||| | ||| ||||| || || || || ||||||| ||||||||| Sbjct 373343 TCAGAGCTCTCCACTTCCAAAGTGATGGTCTTCCCTGTCAAAGTTTTAACAAATATCTGC 373402 Query 172068 AT 172069 || Sbjct 373403 AT 373404 >seq38302 Length=59671 Score = 102 bits (112), Expect = 1e-16 Identities = 291/442 (66%), Gaps = 13/442 (3%) Strand=Plus/Plus Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891 ||||| || || |||| | || || || || || || || |||| ||| || | Sbjct 22800 TTTTGATACTCCCCAACTCTCTTCTCAAAGAAATTAGTCTTCCCTTGTAAACTAATCAGC 22859 Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTT-TTCT--CCTATCAATACATAT 38948 | ||| ||||||| ||||| | | ||| || | || || | || ||| ||| Sbjct 22860 TCCATCCAATCAAACGGATTCTGAGCATTGTACAACTTATTATAACC---CAAAGCATCC 22916 Query 38949 AATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAAT 39008 || |||||||| ||||||||||||| |||| ||| || || | |||||| |||| Sbjct 22917 AACAATCTATCAGCCACAAATTCAATGTATTTGCTCATCAAATCTCCATTCATTCCCACC 22976 Query 39009 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatt 39068 | | | || | |||||| | ||| || ||||||| || ||||| | | || Sbjct 22977 AGCGCACAAGGCAGCGCATCACACACAAACTCCCTTTCTATCTCCACAGCATCTGCAACA 23036 Query 39069 atcataattatattattttttgataa--tttatatttaatatgattcgcatataGTAAAC 39126 ||| ||| | || | ||| || | | || | | ||| || |||| Sbjct 23037 ATCCCC-TTAACTCGTTCCTCAGTAAGCTTCGTCCTCAACAAACT----ATAAAGCAAAC 23091 Query 39127 ATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATC 39186 | || ||||| || |||||||||||||| || || || || || |||||||||| Sbjct 23092 AAGCGAAATCACAGTGCAAACCTTCGTCCCTTGAAATTAACTCGTTCGAGAAAGTTAATC 23151 Query 39187 CTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATA 39246 | |||||||| || | |||||| | ||| ||||| | ||| || | ||| || || | Sbjct 23152 CAGGCATTAACCCCCGCTTTTTTAACCAGAATATAGCACAAAAGCTTCCAGAGAAAAAAA 23211 Query 39247 TACCCTCCACACACGCAAATGC 39268 |||| |||||||| | |||||| Sbjct 23212 TACCTTCCACACAAGAAAATGC 23233 >seq32633 Length=132462 Score = 100 bits (110), Expect = 5e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| || || || | || ||||| | || | || || || || ||||| Sbjct 60655 ATACCACCCCTCAGGCGCAGCACCAAATGGAGGGTTGATTCCTTTTGGATGTTGTAATCA 60714 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | || | | | | || || | || || ||||||||||| | ||||| ||||||||| Sbjct 60715 GCTAGTGTCCTTCCATCCTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCAGGT 60774 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| ||||| || ||||| || || || || || Sbjct 60775 GGAATCCCTTCCTTATCTTGAATTTTTGCCTTAACATTGTCGATGGTGTCCGAGCTCTCA 60834 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| |||||||| ||||| ||||| || ||||| | || || ||||| Sbjct 60835 ACTTCAAGAGTAATAGTTTTCCCAGTCAAGGTTTTCACAAAGATTTGCAT 60884 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 171861 ACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCC 171920 || ||||| | || | |||||| || |||||||| | | || | | || || Sbjct 60448 ACCAAATGGAGGGTGGACTCTTTCTGGATGTTATAATCAGCAAGAGTCCTCCCATCCTCA 60507 Query 171921 AATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGT 171980 | || ||||||||||||||||| | ||| ||||| || || || |||||||| ||||| Sbjct 60508 AGCTGCTTACCAGCAAAAATTAAACGCTGCTGGTCCGGGGGAATACCTTCTTTGTCTTGG 60567 Query 171981 ATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 172040 || || ||| |||||| || |||||||| || ||||| || || || || || Sbjct 60568 ATCTTTGCTTTCACATTATCAATTGTATCTGAACTCTCAACTTCCAGCGTGATTGTCTTC 60627 Query 172041 CCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || || | || |||||||| Sbjct 60628 CCAGTCAACGTCTTCACAAAGATCTGCAT 60656 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| || || | | || | ||| | ||| | || || |||||| || || Sbjct 60883 ATACCACCCCTCAGCCTCAGCACCAGATGCAGAGTGGATTCCTTCTGAATATTGTAGTCA 60942 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || || | || || | ||| || |||||||| || || ||||| || || || Sbjct 60943 GCAAGAGTACGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGA 61002 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||||||||| || |||||| ||| ||||| || ||||| || || Sbjct 61003 GGAATGCCTTCTTTATCCTGGATTTTAGCTTTGACATTGTCAATTGTATCGGAACTCTCA 61062 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || ||||| || || || || || ||||| | || |||||||| Sbjct 61063 ACCTCAAGGGTAATAGTCTTTCCTGTCAAAGTTTTTACAAAGATCTGCAT 61112 >seq3636 Length=134301 Score = 100 bits (110), Expect = 5e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| || || || | || | || | || | ||| || |||||| || || Sbjct 15856 ATACCACCCCTCAGCCGAAGAACAAGGTGGAGGGTGGACTCCTTTTGAATATTGTAGTCG 15797 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || |||| | || || | || || ||||||||||| |||||||| ||||| || Sbjct 15796 GCAAGAGTTCGTCCATCCTCAAGCTGCTTTCCAGCAAAAATCAATCTCTGCTGGTCTGGA 15737 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || || || || || || ||||| || || || || || Sbjct 15736 GGGATGCCTTCCTTGTCCTGGATCTTCGCCTTAACATTGTCAATGGTGTCCGAGCTCTCA 15677 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || ||||| || ||||| ||||| |||| ||| |||||||| Sbjct 15676 ACTTCGAGGGTGATGGTCTTCCCAGTCAATGTCTTAACGAAAATCTGCAT 15627 Score = 87.8 bits (96), Expect = 3e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 171861 ACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCG-TCATC 171919 || ||||| || || | |||||| ||||| ||||| | || | || | | || || Sbjct 16063 ACCAAATGCAACGTGGACTCTTTCTGGATATTGTAATCAGC-AAGGGTCCTCCCATCCTC 16005 Query 171920 CAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTG 171979 | || ||||||||||| || |||| ||| || || ||||| || |||||||||||||| Sbjct 16004 AAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATCTGGTGGAATCCCTTCTTTATCTTG 15945 Query 171980 TATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTT 172039 || || ||||| ||| || ||||| || ||| || || | || || || || Sbjct 15944 GATCTTCGCCTTTACGTTATCAATTGTATCAGAACTTTCGACCTCCAAGGTGATCGTCTT 15885 Query 172040 ACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||| || | || |||||||| Sbjct 15884 CCCTGTCAATGTCTTCACAAAGATCTGCAT 15855 >seq48356 Length=183133 Score = 95.1 bits (104), Expect = 2e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 171966 CCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCT 172025 |||||||| ||||||||||| ||| ||||| || ||||| ||||| ||||| Sbjct 106515 CCTTCTTTGTCTTGTATTTTGGCTTTAACATTGTCGATTGTATCACTGGATTCAACTTCG 106456 Query 172026 AGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||||| |||||||||||||| | ||||| | ||||||||||||||| Sbjct 106455 AGAGTTATGGTTTTACCAGTGAGAGTTTTCACGAATATCTGCATTTT 106409 >seq33627 Length=115891 Score = 91.5 bits (100), Expect = 3e-13 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||||||||| || | || | ||| | || | |||||| ||| || | |||| Sbjct 50429 ATGCCACCTCTAAGACGAAGAACAAGATGCAGGGTTGACTCTTTCTGAATGTTGTGATCT 50370 Query 171900 GATAAAGATCGTTCGTCATCCAA--TTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAG 171957 | || | | |||| || | ||| || || ||||| || | |||||| ||| | | Sbjct 50369 GCCAATGTCCTCCCGTCCTCTTAAGTTGCTTCCCTGCAAAGATCAGTCTCTGCTGGCCTG 50310 Query 171958 GTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATT 172017 | || || ||||| || ||||| || || ||||||||| ||||||||||| || Sbjct 50309 GAGGAATACCTTCCTTGTCTTGAATCTTTGCTTTTACATTGTCGATAGTATCTGAACTTT 50250 Query 172018 CTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 | ||||| || | ||||| || || || | ||| || | || |||||||| Sbjct 50249 CAACTTCAAGGATGATGGTCTTGCCGGTAAGTGTCTTGACAAAGATCTGCAT 50198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904534899182400