Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06]
53,128 sequences; 1,222,768,627 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq19192 170 1e-37
seq3636 159 3e-34
seq32633 156 3e-33
seq33627 152 4e-32
seq51452 150 1e-31
seq50574 145 6e-30
seq50758 136 3e-27
seq50708 136 3e-27
seq20296 111 1e-19
>seq19192
Length=430667
Score = 170 bits (188), Expect = 1e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||| | ||| |||||||||||||| || ||||| || ||||| || ||||| |||
Sbjct 373634 CCTCCCCTGAGACGAAGCACCAAATGAAGGGTTGATTCCTTCTGAATATTGTAATCTGCA 373693
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | ||| || |||||||| |||||| ||||||| || ||||| || || |||
Sbjct 373694 AGGGTCCTTCCATCCTCAAGTTGTTTCCCAGCAAATATCAACCTCTGCTGGTCTGGAGGA 373753
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|||||||| ||||| || | ||| || ||| | || | || || || || |||
Sbjct 373754 ATACCCTCCTTGTCCTGGATCTTTGCCTTTACATTGTCGATGGTATCTGAGCTCTCAACT 373813
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || || ||||| ||||| ||||||||||| ||||||||
Sbjct 373814 TCAAGGGTGATCGTCTTGCCCGTTAAAGTTTTAACAAAAATCTGCAT 373860
Score = 138 bits (152), Expect = 9e-28
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||||||||||| ||||| |||||| || || || || || ||||||||||| |||
Sbjct 373406 CCTCCCCTCAAACGCAACACCAGATGAAGTGTCGACTCCTTCTGTATGTTATAATCAGCA 373465
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | ||| || ||||| || || ||| |||||| || ||||| || || |||
Sbjct 373466 AGTGTCCTTCCATCTTCAAGTTGCTTCCCTGCAAATATCAGTCGCTGCTGGTCTGGGGGA 373525
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || || |||||||| |||||| | || ||| | || | ||||| ||| || ||
Sbjct 373526 ATCCCTTCCTTGTCTTG-AATTTTGGCCTTCACATTATCAATTGTGTCCGAACTCTCAAC 373584
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | || |||||||| || || || || || ||||| || |||||
Sbjct 373585 CTCCAAGGTGATAGTTTTTCCTGTCAAAGTCTTGACAAAGATTTGCAT 373632
Score = 134 bits (148), Expect = 1e-26
Identities = 161/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| ||||| | || || |||||||| ||||| || || ||||| |||| |||||| |
Sbjct 373190 CGAAGCACAAGGTGGAGTGTGGATTCCTTTTGGATATTGTAATCTGCAAGGGTGCGCCCA 373249
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || || || || |||||| |||| | || |||||||| || || || || ||||||
Sbjct 373250 TCCTCCAGCTGCTTACCAGCAAATATGAGCCTCTGCTGATCTGGTGGGATCCCTTCTTTG 373309
Query 29692 TCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
|| || |||||| | || || | || | ||||||||| || ||||| | ||| ||
Sbjct 373310 TCCTG-AATTTTGGCCTTCACGTTGTCAATAGTGTCAGAGCTCTCCACTTCCAAAGTGAT 373368
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || ||||||||||||||||||||
Sbjct 373369 GGTCTTCCCTGTCAAAGTTTTAACAAATATCTGCAT 373404
Score = 127 bits (140), Expect = 2e-24
Identities = 160/217 (74%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | || || || || || |||||||| || ||||| |||| || ||
Sbjct 373873 ACGGAGGACAAGGTGGAGGGTAGACTCCTTTTGAATATTGTAATCAGCAAGAGTTCGGCC 373932
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || || || |||||| | |||| || ||||| || || ||||| || || ||
Sbjct 373933 ATCTTCAAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCTGGAGGAATCCCTTCCTT 373992
Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|||||| |||||| | || || | || | ||||| ||| || || |||||||| |
Sbjct 373993 GTCTTG-AATTTTCGCCTTCACGTTATCAATTGTGTCTGAACTCTCGACCTCAAGAGTAA 374051
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| ||||||||||| | ||||||||||||||||||||
Sbjct 374052 TGGTTTTGCCAGTAAGAGTTTTAACAAATATCTGCAT 374088
>seq3636
Length=134301
Score = 159 bits (176), Expect = 3e-34
Identities = 167/217 (77%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| ||||| | ||||| ||||||||||| || ||||||||||| |||| ||| |||
Sbjct 16298 ACGAAGCACAAGGTGAAGGGTGGATTCTTTCTGGATGTTATAATCAGCAAGGGTACGACC 16239
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || || || |||||| | ||||| || |||||||| || ||||||||||| ||
Sbjct 16238 ATCCTCCAGCTGCTTACCAGCAAAAATCAACCTCTGCTGATCTGGTGGAATACCCTCCTT 16179
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||| || ||| |||| ||| || | || | ||| ||||| || || || | ||| |
Sbjct 16178 GTCCTG-AATCTTTGCTTTCACGTTATCAATAGTATCAGAGCTCTCCACCTCCAAAGTGA 16120
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|||| || ||||||| || || ||||||||||||||
Sbjct 16119 TAGTCTTCCCAGTTAGAGTCTTGACAAATATCTGCAT 16083
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||||||||| ||||||||||| | |||||| ||||| || || || ||||| |||
Sbjct 16081 CCTCCCCTCAAACGGAGCACCAAATGCAACGTGGACTCTTTCTGGATATTGTAATCAGCA 16022
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | ||| || || || || |||||| | ||||||| |||||||| || |||
Sbjct 16021 AGGGTCCTCCCATCCTCAAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATCTGGTGGA 15962
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || ||||| ||||| | || || || | || | || |||||| ||| ||
Sbjct 15961 ATCCCTTCTTTATCTTGGATCTTCGCCTTTACGTTATCAATTGTATCAGAACTTTCGACC 15902
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | || || || || || || || || || ||||| ||||||||
Sbjct 15901 TCCAAGGTGATCGTCTTCCCTGTCAATGTCTTCACAAAGATCTGCAT 15855
>seq32633
Length=132462
Score = 156 bits (172), Expect = 3e-33
Identities = 173/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || | |||||| || || | || || ||||| || ||||| ||||| || || |||
Sbjct 61114 CCACCACGCAAACGGAGAACAAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCA 61173
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| ||| ||| || ||||| || |||||| | ||||| |||||||||||||| |||
Sbjct 61174 AGGGTACGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAACCTTTGCTGATCCGGAGGA 61233
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || ||||| || ||| |||| || ||| | || | ||||| || || ||
Sbjct 61234 ATACCTTCCTTGTCCTG-AATCTTTGCCTTAACATTATCAATTGTGTCTGAGCTCTCAAC 61292
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| ||||| || |||||||| ||||| ||||| ||||||||
Sbjct 61293 CTCGAGAGTGATAGTCTTCCCAGTTAAAGTTTTTACAAAGATCTGCAT 61340
Score = 152 bits (168), Expect = 4e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||||||||| || ||||||||||| || ||||| ||||| || ||||||||||| |||
Sbjct 60430 CCTCCCCTCAACCGGAGCACCAAATGGAGGGTGGACTCTTTCTGGATGTTATAATCAGCA 60489
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | ||| || || || || |||||| | || || | ||||| ||||| |||
Sbjct 60490 AGAGTCCTCCCATCCTCAAGCTGCTTACCAGCAAAAATTAAACGCTGCTGGTCCGGGGGA 60549
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| ||||||||||| | ||| ||| ||| | || | || || ||| || |||
Sbjct 60550 ATACCTTCTTTGTCTTGGATCTTTGCTTTCACATTATCAATTGTATCTGAACTCTCAACT 60609
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || || ||||| || || || ||||| ||||||||
Sbjct 60610 TCCAGCGTGATTGTCTTCCCAGTCAACGTCTTCACAAAGATCTGCAT 60656
Score = 147 bits (162), Expect = 2e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||||| |||||||||||||| || || ||||| ||||| ||||| ||||| ||
Sbjct 60658 CCACCCCTCAGGCGCAGCACCAAATGGAGGGTTGATTCCTTTTGGATGTTGTAATCAGCT 60717
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | ||| || || || || |||||| | || | || ||||| || || |||
Sbjct 60718 AGTGTCCTTCCATCCTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCAGGTGGA 60777
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || || || ||||| |||||||| || ||| | || | ||||| || || ||
Sbjct 60778 ATCCCTTCCTTATCTTG-AATTTTTGCCTTAACATTGTCGATGGTGTCCGAGCTCTCAAC 60836
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||||||| |||||||| ||||| |||||||| ||||| || |||||
Sbjct 60837 TTCAAGAGTAATAGTTTTCCCAGTCAAGGTTTTCACAAAGATTTGCAT 60884
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || | || ||| || || | ||| || || || || ||||| || || || || |||
Sbjct 61342 CCACCACGCAGACGAAGGACAAGATGGAGGGTAGACTCCTTTTGGATATTGTAGTCAGCA 61401
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || || ||| || | || || |||||| | ||||| ||||||||||| || |||
Sbjct 61402 AGAGTTCGGCCATCCTCTAACTGCTTTCCAGCAAAGATCAACCTTTGCTGATCTGGAGGA 61461
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || || || ||||| | ||| || ||| | || | |||||| ||| || ||
Sbjct 61462 ATTCCTTCCTTATCTTGGATCTTTGCCTTAACATTGTCGATAGTGTCTGAACTCTCAACC 61521
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || ||||||||||| | ||| || ||||| || |||||
Sbjct 61522 TCGAGAGTGATGGTTTTGCCAGTGAGGGTCTTTACAAAGATTTGCAT 61568
Score = 113 bits (124), Expect = 3e-20
Identities = 156/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| || |||| ||||| || ||||| || |||||||||||||| |||| ||| ||| |
Sbjct 60214 CGAAGAACCAGGTGAAGAGTTGATTCCTTCTGAATGTTATAATCAGCAAGGGTACGACCA 60273
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || || || || |||||| | |||| || ||||| || || |||||||| || ||
Sbjct 60274 TCCTCCAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGAATACCTTCCTTA 60333
Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
|| || ||| |||| || || | || | ||| || || ||||| || | || ||
Sbjct 60334 TCCTG-AATCTTTGCCTTCACGTTGTCAATAGTATCGGAGCTCTCTACCTCCAAGGTAAT 60392
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || ||||| | || || ||||| ||||||||
Sbjct 60393 CGTCTTCCCAGTCAGCGTCTTGACAAAGATCTGCAT 60428
>seq33627
Length=115891
Score = 152 bits (168), Expect = 4e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||||||||||| |||||||| || || | || || || |||||||| ||||||
Sbjct 50654 CCTCCCCTCAAACGCAAGACCAAATGGAGAGTCGCCTCCTTCTGGATGTTATAGTCCGCA 50595
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | || || |||||||| |||||| | ||||| | ||||| || |||||
Sbjct 50594 AGAGTCCTGCCGTCCTCCAGTTGTTTACCAGCAAAGATCAAACGCTGCTGGTCTGGCGGG 50535
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|||||||| |||||||| ||| |||| ||||||| | || | || |||||| || ||
Sbjct 50534 ATACCCTCCTTGTCTTG-AATCTTTGCTTTGACATTGTCAATGGTATCAGAACTCTCAAC 50476
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | |||||| || || ||||| || || || ||||| || |||||
Sbjct 50475 CTCCAAAGTTATTGTCTTCCCAGTCAAAGTCTTGACAAAAATATGCAT 50428
Score = 89.7 bits (98), Expect = 4e-13
Identities = 150/215 (70%), Gaps = 8/215 (4%)
Strand=Plus/Minus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| || || | ||| || ||| | || || || ||||| || || |||| || | | |
Sbjct 50184 CGAAGGACAAGATGGAGGGTG-ACTCATTCTGGATGTTGTAGTCAGCAAGAGTTCTACCA 50126
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || ||||| ||||||||| | ||||| ||||| ||||| || ||||||||||| |||
Sbjct 50125 TCTTCAAGTTGCTTGCCAGCAAAAATCAACCTTTGTTGATCAGGAGGAATACCCTCCTTG 50066
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
|| || | ||| |||||| | || | || || || || || ||||| | | |
Sbjct 50065 TCCTGGATCTTTGCCTTGACATTGTCAATGGTATCTGAGCTCTCGACCTCAAGCATAACA 50006
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | ||| |||||| ||||| || |||||
Sbjct 50005 GTCT---CAG----GGTTTTGACAAAGATTTGCAT 49978
>seq51452
Length=252770
Score = 150 bits (166), Expect = 1e-31
Identities = 155/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643
|| || || || || |||||||| |||||||| || | || || ||| || |||||
Sbjct 4775 TGGAGAGTTGACTCCTTTTGAATATTATAATCTGCGAGAGTACGCCCATCTTCCAGTTGC 4834
Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703
|| || ||| |||||| || ||||||||||| || |||||||| |||||||||| |||
Sbjct 4835 TTCCCTGCAAATATCAGCCTCTGCTGATCCGGTGGGATACCCTCCTTGTCTTGTATTTTC 4894
Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763
|| ||| | |||| ||||| || ||| ||||| || || || ||||| ||||||
Sbjct 4895 GCCTTAACATTGTCTATGGTGTCCGAGCTTTCAACTTCCAGTGTGATGGTTTTTCCAGTT 4954
Query 29764 AAGGTTTTAACAAATATCTGCAT 29786
| |||||||||||| ||||||||
Sbjct 4955 AGGGTTTTAACAAAGATCTGCAT 4977
Score = 140 bits (154), Expect = 2e-28
Identities = 170/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| |||||||| | || || | ||||| || ||||| || || ||||||||||| ||
Sbjct 58672 CCACCCCTCAACCTGAGAACAAGGTGAAGGGTTGATTCCTTCTGGATGTTATAATCAGCC 58731
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | ||| || | ||| || |||||| | ||||| || |||||||| || ||
Sbjct 58732 AGAGTTCTTCCATCTTCTAATTGCTTCCCAGCAAAAATCAACCTCTGCTGATCAGGTGGG 58791
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|||||||| |||||||| |||||| | || ||| | |||| ||||| || || ||
Sbjct 58792 ATACCCTCCTTGTCTTG-AATTTTAGACTTAACATTGTCTATCGTGTCCGAGCTCTCAAC 58850
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
||| | || || ||||| ||||||||||| |||||||| || ||||||
Sbjct 58851 TTCCAACGTGATTGTTTTTCCAGTTAAGGTCTTAACAAAAATTTGCATT 58899
Score = 129 bits (142), Expect = 5e-25
Identities = 153/205 (75%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643
|| || || || || |||||||||||||| || |||| || | ||| || | |||
Sbjct 58240 TGGAGTGTTGACTCCTTTTGAATGTTATAGTCAGCAAGAGTCCTCCCATCTTCCAATTGC 58299
Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703
|| || ||| |||||| |||||||||||||| || || || || |||||||| ||||||
Sbjct 58300 TTTCCTGCAAATATCAGCCTTTGCTGATCCGGTGGGATGCCTTCCTTGTCTTG-AATTTT 58358
Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762
|| || ||| | || | ||||| || || ||||| | || || ||||| |||||
Sbjct 58359 TGCCTTAACATTGTCAATCGTGTCCGAGCTCTCAACTTCCAATGTGATTGTTTTCCCAGT 58418
Query 29763 TAAGGTTTTAACAAATATCTGCATT 29787
|||||| |||||||| || ||||||
Sbjct 58419 TAAGGTCTTAACAAAGATTTGCATT 58443
Score = 125 bits (138), Expect = 5e-24
Identities = 158/217 (73%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | || || || || || |||||||| || ||||| || | || ||
Sbjct 4534 ACGAAGAACAAGGTGGAGTGTTGACTCCTTTTGAATATTGTAATCAGCGAGAGTCCGTCC 4593
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| ||||| ||||| || ||| | ||||| | ||| ||||| ||||||||||| || ||
Sbjct 4594 ATCCTCGAGCTGTTTTCCTGCAAAGATCAAACGTTGTTGATCTGGCGGAATACCTTCCTT 4653
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||||| | ||| || ||| | || | ||||| || ||| ||||| | || ||
Sbjct 4654 ATCTTGGATTTTGGCCTTAACATTATCAATCGTGTCCGAGCTTTCGACTTCCAATGTGAT 4713
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
||||| ||||| |||||||||||||| || ||||||
Sbjct 4714 TGTTTTCCCAGTCAAGGTTTTAACAAAAATTTGCATT 4750
Score = 120 bits (132), Expect = 2e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||| |||||||| | |||||| | ||| || || || || || || || || || |||||
Sbjct 57987 TCCACCCCTCAACCTCAGCACAAGATGGAGAGTAGACTCCTTCTGGATATTGTAGTCCGC 58046
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
| || | | ||| || | ||||| |||||| | || | || ||||| ||||||||
Sbjct 58047 CAGTGTCCTACCATCCTCCAACTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCCGGCGG 58106
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|||||| ||||| || |||| || || ||| | || | ||||| || || ||
Sbjct 58107 AATACCTTCTTTATCCTGTATCTTCGCCTTCACATTGTCAATCGTGTCTGAGCTCTCAAC 58166
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
||| | || || || || || ||||||||||||||||| || ||||||
Sbjct 58167 TTCCAATGTGATGGTCTTTCCCGTTAAGGTTTTAACAAAGATTTGCATT 58215
Score = 114 bits (126), Expect = 1e-20
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||| ||||||| | |||||| | ||| || || || || || ||||| || ||||| ||
Sbjct 3838 TCCACCCCTCAGCCTCAGCACAAGATGGAGAGTAGACTCCTTCTGAATATTGTAATCAGC 3897
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
|| || | | ||| || | || || |||||| | || | || ||||| || || ||
Sbjct 3898 AAGTGTCCTACCATCCTCCAACTGCTTCCCAGCAAAGATAAGCCTCTGCTGGTCTGGTGG 3957
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737
||| ||||| || || || ||| |||| || ||| | || | ||||| || || |
Sbjct 3958 AATGCCCTCCTTATCCTG-AATCTTTGCCTTCACATTGTCAATCGTGTCTGAGCTCTCAA 4016
Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
|||| | || || ||||| || ||||||||||||||||| || ||||||
Sbjct 4017 CTTCTAATGTGATGGTTTTTCCCGTTAAGGTTTTAACAAAGATTTGCATT 4066
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || || | ||||| |||||||| || || ||||||||||| ||
Sbjct 4295 CCACCTCTCAATCTGAGAACTAGGTGAAGGGTGGATTCCTTCTGGATGTTATAATCAGCC 4354
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | ||| || | ||| || ||||| | |||| || ||||| || ||||
Sbjct 4355 AGCGTTCTTCCATCTTCTAATTGCTTCCCAGCGAAAATCAGCCTCTGCTGGTCTGGCGCG 4414
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || || ||||| | ||| || ||| | || | ||||| || || |||
Sbjct 4415 ATACCTTCCTTATCTTGGATTTTCGCCTTAACATTATCAATTGTGTCCGAGCTCTCAACT 4474
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
|| | || || ||||| || ||||||||||||||||| || ||||||
Sbjct 4475 TCCAATGTAATGGTTTTCCCGGTTAAGGTTTTAACAAAGATTTGCATT 4522
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643
|| || || || || |||||||||||||| || |||| || | ||| || | ||||
Sbjct 4091 TGGAGTGTTGACTCCTTTTGAATGTTATAGTCAGCAAGAGTCCTCCCATCTTCCAATTGT 4150
Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703
|| || ||| | |||| ||| ||||| || || || |||||||| || || |||| ||
Sbjct 4151 TTCCCTGCAAAAATCAGTCTCTGCTGGTCTGGTGGGATACCCTCCTTATCCTGTATCTTG 4210
Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763
|| ||| | || | || |||||| || ||||| | || || || || || |||
Sbjct 4211 GCCTTCACATTGTCAATGGTATCAGAACTCTCCACTTCCAACGTGATCGTCTTCCCCGTT 4270
Query 29764 AAGGTTTTAACAAATATCTGCAT 29786
|| || || ||||| ||||||||
Sbjct 4271 AACGTCTTCACAAAGATCTGCAT 4293
>seq50574
Length=377344
Score = 145 bits (160), Expect = 6e-30
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||||||||||| | |||||||||||| || ||||| || || |||||||| || |||||
Sbjct 94592 TCCTCCCCTCAGCCTCAGCACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGC 94651
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
|| ||||||| ||| || | || || || ||| |||| | || ||||| || || ||
Sbjct 94652 AAGGGTGCGACCATCTTCCAACTGCTTTCCTGCAAATATTAGCCTCTGCTGGTCTGGGGG 94711
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||| ||||| ||||| || | || ||||| | || | ||||||||| || ||
Sbjct 94712 AATCCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAACTCTCGAC 94771
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || || ||||| || | |||||| || || ||||||||
Sbjct 94772 CTCAAGGGTGATGGTCTTGCCGGTGAGGGTTTTGACGAAGATCTGCAT 94819
Score = 102 bits (112), Expect = 6e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || ||||| ||||| || ||||| || || ||||| ||||| || | || ||
Sbjct 95060 ACGGAGGACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCGGCGAGAGTACGGCC 95119
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
|| || || || ||||| || | || | ||||||||||| || ||||| || || ||
Sbjct 95120 GTCCTCAAGCTGCTTGCCGGCGAAGATAAGCCTTTGCTGATCTGGGGGAATTCCTTCCTT 95179
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | ||| ||| || | || | ||||| ||| || || || ||||| ||
Sbjct 95180 GTCCTGGATTTTGGCTTTTACGTTGTCGATTGTGTCGGAACTCTCGACCTCGAGAGTGAT 95239
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || | |||||| || || ||||||||
Sbjct 95240 GGTCTTTCCGGTAAGGGTTTTCACGAAGATCTGCAT 95275
>seq50758
Length=122349
Score = 136 bits (150), Expect = 3e-27
Identities = 162/217 (75%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| |||||||| ||||| || || || || |||||||| ||||| || | ||| ||
Sbjct 118251 ACGGAGCACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCAGCTAGGGTACGGCC 118192
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || | |||||||||||| | ||||| || |||||||| || || || ||||||||
Sbjct 118191 ATCTTCCAACTGTTTGCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCTTT 118132
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|| || ||| || | || || | || | ||||| || ||| |||||||| || |
Sbjct 118131 ATCCTG-AATCTTCGCCTTAACGTTGTCAATTGTGTCGGAGCTTTCGACTTCAAGGGTGA 118073
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| ||||| || |||| |||||| ||||| || |||||
Sbjct 118072 TTGTTTTCCCGGTTAGGGTTTTGACAAAGATTTGCAT 118036
Score = 123 bits (136), Expect = 2e-23
Identities = 159/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | || || ||||| || || ||||| |||||||| || | || |
Sbjct 118935 ACGGAGGACAAGGTGCAGGGTGGACTCCTTCTGAATATTATAATCAGCCAGAGTCCTTCC 118876
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || | ||| || || ||| | |||| || ||||||||||| ||||||||||| ||
Sbjct 118875 ATCTTCCAATTGCTTCCCCGCAAAGATCAGCCTCTGCTGATCCGGGGGAATACCCTCCTT 118816
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||| || ||| || | ||| ||| | || | ||| |||||| ||| || || | ||| |
Sbjct 118815 GTCCTG-AATCTTAGCTTTCACATTGTCAATAGTATCAGAACTTTCCACCTCCAAAGTGA 118757
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| ||||| || || || ||||| ||||| ||||||||
Sbjct 118756 TGGTTTTCCCGGTCAACGTTTTCACAAAAATCTGCAT 118720
Score = 120 bits (132), Expect = 2e-22
Identities = 159/218 (73%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || ||||| ||||| || || || || || ||||| ||||| || | ||| ||
Sbjct 118479 ACGGAGAACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGCGAGGGTTCGGCC 118420
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
|| || ||||| || || ||| | |||| |||||||| || || ||||||||||| ||
Sbjct 118419 GTCTTCAAGTTGCTTTCCGGCAAAGATCAGCCTTTGCTGGTCTGGTGGAATACCCTCCTT 118360
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||| || ||| || | ||||| | || | ||||| || ||| || || | ||| |
Sbjct 118359 GTCCTG-AATCTTAGCCTTGACGTTGTCAATTGTGTCGGAGCTTTCCACCTCCAAAGTGA 118301
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
| ||||| ||||| || || || ||||| |||||||||
Sbjct 118300 TGGTTTTCCCAGTCAAAGTCTTCACAAAAATCTGCATT 118263
>seq50708
Length=321788
Score = 136 bits (150), Expect = 3e-27
Identities = 145/189 (77%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 29542 ACATCATTTTATCGTTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTT 29601
|| |||| || || | ||||| | | ||||| ||| | ||| || |||||||| ||
Sbjct 282110 ACTTCATCTTCTCTATAACCTCCGCGAAGACGCAACACAAGATGGAGAGTGGATTCCTTC 282169
Query 29602 TGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAAT 29661
|||||||||||||| |||| || || ||| ||||||||||| |||||| | |||||
Sbjct 282170 TGAATGTTATAATCAGCAAGTGTTCGCCCATCCTCGAGTTGTTTTCCAGCAAAAATCAAC 282229
Query 29662 CTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTAC 29720
||||| |||||||| ||||| || || |||||||| ||| |||| ||| ||| | || |
Sbjct 282230 CTTTGTTGATCCGGAGGAATTCCTTCCTTGTCTTG-AATCTTTGTTTTAACATTGTCAAT 282288
Query 29721 AGTGTCAGA 29729
||||||||
Sbjct 282289 GGTGTCAGA 282297
>seq20296
Length=523354
Score = 111 bits (122), Expect = 1e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| ||||||||||| || |||||||| || || ||||| ||||| || | ||| ||
Sbjct 452956 ACGAAGCACCAAATGGAGAGTGGATTCCTTCTGGATGTTGTAATCAGCTAGGGTTCGGCC 452897
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || ||||| || || | || | | ||||| ||||| ||||| || || ||
Sbjct 452896 ATCCTCCAGCTGTTTTCCGGCGAAAATGAGCCGCTGCTGGTCCGGTGGAATGCCTTCCTT 452837
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | ||| || || | || | ||||| || ||| || ||||| || ||
Sbjct 452836 GTCCTGGATCTTTGCCTTCACGTTGTCGATTGTGTCGGAGGATTCGACCTCAAGGGTGAT 452777
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| || || |||| |||||| || || |||||||| ||
Sbjct 452776 GGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATCTT 452738
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 384969771531048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |