Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06]
53,128 sequences; 1,222,768,627 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq49770 82.4 1e-10
>seq49770
Length=43049
Score = 82.4 bits (90), Expect = 1e-10
Identities = 188/276 (68%), Gaps = 8/276 (3%)
Strand=Plus/Plus
Query 193803 GGGCCAACTTATTATCATCGTCTTAAACATATGGTTAAGGATAAAATGCATGCTAGAAGT 193862
|||||||||||||| || | || || || ||||| | |||||||| ||| || | ||
Sbjct 25688 GGGCCAACTTATTACCAGAGGCTGAAGCACATGGTGGATGATAAAATCCATTCTCGTGGT 25747
Query 193863 CATGGACAAGTGACTACT-TTACATCGACAACCAAATTGTGGTCGTTCTCAAGGTGGAGG 193921
| ||| | ||| | | |||| | |||| || | || | |||| | ||||||
Sbjct 25748 CGTGGTCCTGTGCAGATTCTTAC-TAGACAGCCTGCTGAAGGGAGATCTCGGGATGGAGG 25806
Query 193922 TTTAAGATTTGGAGAAATGGAGAAAGACTGTATTTTAGTTCATGGTGCTACTCAATTCTT 193981
|| ||||||| || |||||| |||||||| | | |||||| ||| | || ||| |
Sbjct 25807 CCTACGATTTGGGGAGATGGAGCGTGACTGTATGATCGCTCATGGGGCTGCACATTTCCT 25866
Query 193982 GAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTGCACAG-AATGTG 194040
|| || || ||||| | ||| ||| ||| |||| ||| ||| ||||||
Sbjct 25867 CAAAGAGAGGCTGTTTGATCAAAGCGATGCTTACAGAGTTCATGTCTGC-CAGCAATGTG 25925
Query 194041 GTATGATTACAAGTACT--TCTAAAAA--ATGTCAT 194072
|| | ||| ||| | || |||||||| |||||||
Sbjct 25926 GTTTAATTGCAATTGCTAATCTAAAAAAGATGTCAT 25961
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 634755778555840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |