Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06] 53,128 sequences; 1,222,768,627 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq44697 84.2 5e-11 >seq44697 Length=182102 Score = 84.2 bits (92), Expect = 5e-11 Identities = 107/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 131864 GTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGG-TGCTTTCTGTGCTATCTTTTG 131922 || || ||||||||||| |||||||| || || || || ||||| |||||||| || || Sbjct 113416 GTTGCATTTGCTTGTGTGGAAGGTATTTTTTTCTCCGGAAGCTTT-TGTGCTATATTCTG 113358 Query 131923 GCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGA 131982 | | || ||||| || || ||||||||| | | || || || | || || || || || Sbjct 113357 GTTAAAAAAGCGGGGGTTAATGCCTGGATTAACCTTCTCGAACGAGTTAATTTCTAGGGA 113298 Query 131983 TGAAGCATTGCATACTGAATTTGCT 132007 |||| ||||| ||| |||||| Sbjct 113297 CGAAGGTTTGCACTGTGATTTTGCT 113273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186004933560008