Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06] 53,128 sequences; 1,222,768,627 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq6080 86.0 3e-12 >seq6080 Length=176080 Score = 86.0 bits (94), Expect = 3e-12 Identities = 154/223 (69%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 65087 CGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTC 65146 || || ||||| ||||||||||| || | ||| | ||| || |||| | | | | Sbjct 156543 CGAGTGCCAAATTGACCATTTGGTTGCAAAAGATTTACATTATTGCTGCCAACATAGTCC 156602 Query 65147 TGAGCCATTCCGATAAT--TGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAAT 65204 || ||||| || || || |||||| | | |||| ||||| || ||||| |||| | Sbjct 156603 TGTGCCATGCCAATGATGGTGCTGC--TAAGACTCTGCTCACCATGGTGATAAGCTGAGT 156660 Query 65205 GTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAA 65264 | ||||||||||| ||| |||||| | ||||||| |||| | || ||| | |||| Sbjct 156661 GCTCAGAGACATAACCAGAAAATTGGGAAACTTTTGCTTCCTTAACAAAGTTCCTCTTAA 156720 Query 65265 ATGCAGAATACAATATTTTCCGTAAACTAATTTTCAATCCATC 65307 | ||| | ||| || |||| | || |||||| ||||| Sbjct 156721 ACGCACAGAACAGAATCTTCCTTTGACCCGGTTTCAAACCATC 156763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235527397789200