Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20obtusifolia_20[genbank_20GCA_5F002018475.1_202017-03-06]
53,128 sequences; 1,222,768,627 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq32633 152 3e-32
seq33627 145 5e-30
seq19192 143 2e-29
seq50708 134 9e-27
seq50758 129 4e-25
seq51452 127 1e-24
seq20296 118 7e-22
seq50574 107 1e-18
seq3636 104 1e-17
>seq32633
Length=132462
Score = 152 bits (168), Expect = 3e-32
Identities = 162/211 (77%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556
|||||||||||| ||| ||| || || ||||||||||| | ||| || | | | || ||
Sbjct 60447 CACCAAATGGAGGGTGGACTCTTTCTGGATGTTATAATCAGCAAGAGTCCTCCCATCCTC 60506
Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616
||| || ||||| ||||| ||||||||||| |||||||| || | || || ||||||
Sbjct 60507 AAGCTGCTTACCAGCAAAAATTAAACGCTGCTGGTCCGGGGGAATACCTTCTTTGTCTTG 60566
Query 34617 GATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675
|||| |||| ||| || || |||||| ||| ||||| ||||||| || || || |
Sbjct 60567 GATC-TTTGCTTTCACATTATCAATTGTATCTGAACTCTCAACTTCCAGCGTGATTGTCT 60625
Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || || ||||| |||||||| ||||||||
Sbjct 60626 TCCCAGTCAACGTCTTCACAAAGATCTGCAT 60656
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || || || |||| |||||||||||| || |||||||| ||||| ||||| |
Sbjct 60658 CCACCCCTCAGGCGCAGCACCAAATGGAGGGTTGATTCCTTTTGGATGTTGTAATCAGCT 60717
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| | | || ||||| || || || ||||| || | | ||| ||||| || ||
Sbjct 60718 AGTGTCCTTCCATCCTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCAGGTGGA 60777
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || ||||| ||| ||| ||||| ||||| | || ||||| |||||| ||
Sbjct 60778 ATCCCTTCCTTATCT-TGAATTTTTGCCTTAACATTGTCGATGGTGTCCGAGCTCTCAAC 60836
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | || || ||||| || || || ||||||||||| || |||||
Sbjct 60837 TTCAAGAGTAATAGTTTTCCCAGTCAAGGTTTTCACAAAGATTTGCAT 60884
Score = 93.3 bits (102), Expect = 3e-14
Identities = 148/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
|||| || ||||| ||||| |||||||||||||| | ||| || || | || ||
Sbjct 60220 ACCAGGTGAAGAGTTGATTCCTTCTGAATGTTATAATCAGCAAGGGTACGACCATCCTCC 60279
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
|| || ||||| ||||| || | | ||| ||||| || || | || ||||| || ||
Sbjct 60280 AGCTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGAATACCTTCCTTATC-CTG 60338
Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676
| |||| || ||| | ||| || || |||||| || |||| ||| ||||| ||
Sbjct 60339 AATCTTTGCCTTCACGTTGTCAATAGTATCGGAGCTCTCTACCTCCAAGGTAATCGTCTT 60398
Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || | ||| || ||||| ||||||||
Sbjct 60399 CCCAGTCAGCGTCTTGACAAAGATCTGCAT 60428
>seq33627
Length=115891
Score = 145 bits (160), Expect = 5e-30
Identities = 171/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || || | |||||| |||||||||||||| |||||| || |||||||| || | |
Sbjct 50654 CCTCCCCTCAAACGCAAGACCAAATGGAGAGTCGCCTCCTTCTGGATGTTATAGTCCGCA 50595
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || | |||| || ||||||||||| ||||| || |||||||| ||||| |||||
Sbjct 50594 AGAGTCCTGCCGTCCTCCAGTTGTTTACCAGCAAAGATCAAACGCTGCTGGTCTGGCGGG 50535
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| |||||||||||| ||| |||| ||| || | ||| || || ||||| ||
Sbjct 50534 ATACCCTCCTTGTCT-TGAATCTTTGCTTTGACATTGTCAATGGTATCAGAACTCTCAAC 50476
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|||| ||||| || || || || || || || |||||||| ||||||
Sbjct 50475 CTCCAAAGTTATTGTCTTCCCAGTCAAAGTCTTGACAAAAATATGCATG 50427
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| ||||||||||| | || | ||| || || ||| || |||||||| | |||||
Sbjct 50427 GCCACCTCTAAGACGAAGAACAAGATGCAGGGTTGACTCTTTCTGAATGTTGTGATCTGC 50368
Query 34539 AAGTGTTCGCTCGTCTTC--AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGC 34596
| ||| | | |||| || |||||| || || ||||| || | | ||| ||| | ||
Sbjct 50367 CAATGTCCTCCCGTCCTCTTAAGTTGCTTCCCTGCAAAGATCAGTCTCTGCTGGCCTGGA 50308
Query 34597 GGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCC 34656
|| | || ||||||||| |||||| ||||| || || ||| || ||
Sbjct 50307 GGAATACCTTCCTTGTCTTGAATCTTTGCTTTTACATTGTCGATAGTATCTGAACTTTCA 50248
Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| | | | || || || ||||| | || || ||||| ||||||||
Sbjct 50247 ACTTCAAGGATGATGGTCTTGCCGGTAAGTGTCTTGACAAAGATCTGCAT 50198
>seq19192
Length=430667
Score = 143 bits (158), Expect = 2e-29
Identities = 169/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || ||||| | ||||||||| || || ||||| ||||| || |||||||
Sbjct 373633 GCCTCCCCTGAGACGAAGCACCAAATGAAGGGTTGATTCCTTCTGAATATTGTAATCTGC 373692
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
||| || | | || ||||||||||| || |||||||| || | ||| ||||| || ||
Sbjct 373693 AAGGGTCCTTCCATCCTCAAGTTGTTTCCCAGCAAATATCAACCTCTGCTGGTCTGGAGG 373752
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| ||||||| |||| || || ||| |||||| ||
Sbjct 373753 AATACCCTCCTTGTCCTGGATCTTTGCCTTTACATTGTCGATGGTATCTGAGCTCTCAAC 373812
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
||| | ||| ||||| || || ||||| ||||| |||||||||||||||
Sbjct 373813 TTCAAGGGTGATCGTCTTGCCCGTTAAAGTTTTAACAAAAATCTGCATG 373861
Score = 136 bits (150), Expect = 2e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || || | ||||||||||| ||| || || |||||| || ||||||||||| | |
Sbjct 373406 CCTCCCCTCAAACGCAACACCAGATGAAGTGTCGACTCCTTCTGTATGTTATAATCAGCA 373465
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| | | ||||||||||| || || |||||||| | ||||| ||||| || ||
Sbjct 373466 AGTGTCCTTCCATCTTCAAGTTGCTTCCCTGCAAATATCAGTCGCTGCTGGTCTGGGGGA 373525
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| ||| ||| | || || || ||||||||| ||||| ||
Sbjct 373526 ATCCCTTCCTTGTCT-TGAATTTTGGCCTTCACATTATCAATTGTGTCCGAACTCTCAAC 373584
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|||| ||| || ||||| || || || || || ||||| || ||||||
Sbjct 373585 CTCCAAGGTGATAGTTTTTCCTGTCAAAGTCTTGACAAAGATTTGCATG 373633
Score = 114 bits (126), Expect = 8e-21
Identities = 169/237 (71%), Gaps = 2/237 (1%)
Strand=Plus/Plus
Query 34471 CAATCGTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTA 34530
|||| ||| || || | ||| || | ||| | ||||| ||| |||||||| || ||
Sbjct 373169 CAATAGTCACCACCACGAAGGCGAAGCACAAGGTGGAGTGTGGATTCCTTTTGGATATTG 373228
Query 34531 TAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGG 34590
||||||| ||| || ||| | || || || || ||||| |||||||| | | ||| ||
Sbjct 373229 TAATCTGCAAGGGTGCGCCCATCCTCCAGCTGCTTACCAGCAAATATGAGCCTCTGCTGA 373288
Query 34591 TCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTC 34649
|| || || | || || ||||| ||| ||| | || ||| | ||| |||||
Sbjct 373289 TCTGGTGGGATCCCTTCTTTGTCC-TGAATTTTGGCCTTCACGTTGTCAATAGTGTCAGA 373347
Query 34650 GCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||||||||||||| || || || || || || || ||||| ||||| ||||||||
Sbjct 373348 GCTCTCCACTTCCAAAGTGATGGTCTTCCCTGTCAAAGTTTTAACAAATATCTGCAT 373404
Score = 114 bits (126), Expect = 8e-21
Identities = 150/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| || |||||||||||| || ||||| | ||| ||||| | |||||||| ||
Sbjct 373886 TGGAGGGTAGACTCCTTTTGAATATTGTAATCAGCAAGAGTTCGGCCATCTTCAAGCTGC 373945
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| || ||||| || | | ||| ||||| || || | || ||||||||| ||| |||
Sbjct 373946 TTTCCAGCAAAGATCAGCCTCTGCTGGTCTGGAGGAATCCCTTCCTTGTCT-TGAATTTT 374004
Query 34624 TGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| || ||| || |||||||||| ||||| || || | || || ||||| || ||
Sbjct 374005 CGCCTTCACGTTATCAATTGTGTCTGAACTCTCGACCTCAAGAGTAATGGTTTTGCCAGT 374064
Query 34683 TAACGTTTTCACAAAAATCTGCATG 34707
| ||||| ||||| |||||||||
Sbjct 374065 AAGAGTTTTAACAAATATCTGCATG 374089
Score = 113 bits (124), Expect = 3e-20
Identities = 149/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| || |||||||||||| || ||||| | ||| ||||| | |||||||| ||
Sbjct 374114 TGGAGGGTAGACTCCTTTTGAATATTGTAATCAGCAAGAGTTCGGCCATCTTCAAGCTGC 374173
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| || ||||| || | | ||| ||||| || || | || ||||||||| ||| |||
Sbjct 374174 TTTCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATCCCTTCCTTGTCT-TGAATTTT 374232
Query 34624 TGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| || ||| || |||||||||| ||||| || || | || || ||||| || ||
Sbjct 374233 GGCCTTCACGTTATCAATTGTGTCTGAACTCTCAACCTCGAGAGTGATGGTTTTTCCAGT 374292
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
| || |||||||| ||||||||
Sbjct 374293 GAGTGTCTTCACAAAGATCTGCAT 374316
>seq50708
Length=321788
Score = 134 bits (148), Expect = 9e-27
Identities = 141/183 (77%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||||||||| | |||||||||| ||||| |||||||||||||| | |
Sbjct 282128 CCTCCGCGAAGACGCAACACAAGATGGAGAGTGGATTCCTTCTGAATGTTATAATCAGCA 282187
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||||||| | || || |||||||| || ||||| || || | ||||| ||||| ||
Sbjct 282188 AGTGTTCGCCCATCCTCGAGTTGTTTTCCAGCAAAAATCAACCTTTGTTGATCCGGAGGA 282247
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||| ||||||||| ||| ||||||||||| | ||| ||||| |||||| ||
Sbjct 282248 ATTCCTTCCTTGTCT-TGAATCTTTGTTTTAACATTGTCAATGGTGTCAGAGCTCTCAAC 282306
Query 34659 TTC 34661
||
Sbjct 282307 CTC 282309
>seq50758
Length=122349
Score = 129 bits (142), Expect = 4e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| | |||||| | ||||| || || || |||||| || ||||| ||||| |
Sbjct 118490 CCGCCGCGAAGACGGAGAACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGCG 118431
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| ||||| ||||||||||||| || |||||||| || | | || ||||| || ||
Sbjct 118430 AGGGTTCGGCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAGCCTTTGCTGGTCTGGTGGA 118371
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| ||| || | || ||| | ||||||||| ||| |||||
Sbjct 118370 ATACCCTCCTTGTC-CTGAATCTTAGCCTTGACGTTGTCAATTGTGTCGGAGCTTTCCAC 118312
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || || ||||| || || || || |||||||||||||||||
Sbjct 118311 CTCCAAAGTGATGGTTTTCCCAGTCAAAGTCTTCACAAAAATCTGCAT 118264
Score = 127 bits (140), Expect = 1e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || |||||||| | |||||| || || || ||||| || ||||| || || |
Sbjct 118035 GCCTCCCCTAAGACGGAGCACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGC 117976
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| |||| ||||||| || || || ||||| ||||| | | ||| |||||||| ||
Sbjct 117975 TAGGGTTCTGCCGTCTTCGAGCTGCTTTCCGGCGAATATCAGCCTCTGCTGGTCCGGTGG 117916
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCA 34657
| ||| |||||||| ||||| | |||||| | ||| ||||| ||| || |
Sbjct 117915 AATTCCTTCCTTGTCCTGAATCTTC-GCCTTAACGTTGTCAATAGTGTCGGAGCTTTCAA 117857
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || | ||| || ||||||||||||| ||||||||||| ||||||||
Sbjct 117856 CCTCAAGGGTGATTGTTTTACCGGTTAGGGTTTTCACAAAGATCTGCAT 117808
Score = 100 bits (110), Expect = 2e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
|| || ||| |||||| ||||| |||||||| | || || | | ||||| | |||
Sbjct 118922 TGCAGGGTGGACTCCTTCTGAATATTATAATCAGCCAGAGTCCTTCCATCTTCCAATTGC 118863
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| || ||||| || | | ||| || ||||| || | ||||||||||| |||||
Sbjct 118862 TTCCCCGCAAAGATCAGCCTCTGCTGATCCGGGGGAATACCCTCCTTGTCCTGAATCTTA 118803
Query 34624 TGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| ||| || | ||| || || || ||||| |||| || || ||||| |||||
Sbjct 118802 -GCTTTCACATTGTCAATAGTATCAGAACTTTCCACCTCCAAAGTGATGGTTTTCCCGGT 118744
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
|||||||||||||||||||||||
Sbjct 118743 CAACGTTTTCACAAAAATCTGCAT 118720
Score = 89.7 bits (98), Expect = 3e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | |||||| || || ||| ||||| || || |||||||| |
Sbjct 118718 CCACCACGAAGACGGAGCACCAAGTGAAGTGTGGATTCCTTCTGGATATTATAATCAGCT 118659
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| | | ||||| | || ||||| ||||| || || | ||| ||||| || ||
Sbjct 118658 AAAGTTCTCCCATCTTCCAACTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGGG 118599
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| ||| || | ||||| | ||| || || ||| || ||
Sbjct 118598 ATACCCTCCTTGTC-CTGAATCTTCGCCTTAACATTGTCAATAGTATCGGAGCTTTCGAC 118540
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | ||| || || || || || | ||||| || || ||||||||
Sbjct 118539 TTCGAGGGTGATAGTCTTCCCAGTGAGTGTTTTGACGAAGATCTGCAT 118492
>seq51452
Length=252770
Score = 127 bits (140), Expect = 1e-24
Identities = 152/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| || |||||||||||| |||||||||| || || ||| | ||||| | |||
Sbjct 58924 TGGAGTGTTGACTCCTTTTGAATATTATAATCTGCCAGAGTGCGCCCATCTTCCAATTGC 58983
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| || ||||| || | | ||||||||||| || | || ||||| ||| ||| |||
Sbjct 58984 TTCCCAGCAAAAATCAGTCTTTGTTGGTCCGGTGGAATACCTTCCTTATCT-TGAATTTT 59042
Query 34624 TGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
|| ||||| || ||| || || |||||| ||||||| || || ||||| |||||
Sbjct 59043 CGTCTTAACATTATCAATAGTATCCGAGCTCTCAACTTCCAACGTGATTGTTTTTCCGGT 59102
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
||| ||||| || ||||| |||||
Sbjct 59103 TAATGTTTTAACGAAAATTTGCAT 59126
Score = 122 bits (134), Expect = 5e-23
Identities = 151/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
|||||||| |||||||||||| |||||||||| || || ||| | ||||| |||||
Sbjct 4775 TGGAGAGTTGACTCCTTTTGAATATTATAATCTGCGAGAGTACGCCCATCTTCCAGTTGC 4834
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| || |||||||| | | ||| || ||||| || | |||||||||||| || |||
Sbjct 4835 TTCCCTGCAAATATCAGCCTCTGCTGATCCGGTGGGATACCCTCCTTGTCT-TGTATTTT 4893
Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| ||||| | || ||||| ||| || ||||||| || || ||||| || ||
Sbjct 4894 CGCCTTAACATTGTCTATGGTGTCCGAGCTTTCAACTTCCAGTGTGATGGTTTTTCCAGT 4953
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
|| ||||| ||||| ||||||||
Sbjct 4954 TAGGGTTTTAACAAAGATCTGCAT 4977
Score = 114 bits (126), Expect = 8e-21
Identities = 152/206 (74%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| || |||||||||||||||||| || | ||| || | | | ||||| | ||||
Sbjct 4091 TGGAGTGTTGACTCCTTTTGAATGTTATAGTCAGCAAGAGTCCTCCCATCTTCCAATTGT 4150
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGT-CTGTGATCTT 34622
|| || ||||| || | | ||| ||||| || || | |||||||| | |||| ||| |
Sbjct 4151 TTCCCTGCAAAAATCAGTCTCTGCTGGTCTGGTGGGATACCCTCCTTATCCTGT-ATC-T 4208
Query 34623 TTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681
| | || || | ||| || || ||||||||||||| || ||||| || || |
Sbjct 4209 TGGCCTTCACATTGTCAATGGTATCAGAACTCTCCACTTCCAACGTGATCGTCTTCCCCG 4268
Query 34682 TTAACGTTTTCACAAAAATCTGCATG 34707
||||||| |||||||| |||||||||
Sbjct 4269 TTAACGTCTTCACAAAGATCTGCATG 4294
Score = 113 bits (124), Expect = 3e-20
Identities = 149/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| || |||||||||||| || ||||| | || || || | || || || |||
Sbjct 4547 TGGAGTGTTGACTCCTTTTGAATATTGTAATCAGCGAGAGTCCGTCCATCCTCGAGCTGT 4606
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| || ||||| || ||||| ||||| || ||||| | || ||||| ||| ||| |||
Sbjct 4607 TTTCCTGCAAAGATCAAACGTTGTTGATCTGGCGGAATACCTTCCTTATCTTGGAT-TTT 4665
Query 34624 TGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| ||||| || ||| ||||| ||| || ||||||| || || ||||| || ||
Sbjct 4666 GGCCTTAACATTATCAATCGTGTCCGAGCTTTCGACTTCCAATGTGATTGTTTTCCCAGT 4725
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
|| ||||| |||||||| |||||
Sbjct 4726 CAAGGTTTTAACAAAAATTTGCAT 4749
Score = 113 bits (124), Expect = 3e-20
Identities = 149/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| || |||||||||||||||||| || | ||| || | | | ||||| | |||
Sbjct 58240 TGGAGTGTTGACTCCTTTTGAATGTTATAGTCAGCAAGAGTCCTCCCATCTTCCAATTGC 58299
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| || |||||||| | | || || ||||| || | || ||||||||| ||| |||
Sbjct 58300 TTTCCTGCAAATATCAGCCTTTGCTGATCCGGTGGGATGCCTTCCTTGTCT-TGAATTTT 58358
Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
|| ||||| | ||| ||||| |||||| ||||||| || || ||||| || ||
Sbjct 58359 TGCCTTAACATTGTCAATCGTGTCCGAGCTCTCAACTTCCAATGTGATTGTTTTCCCAGT 58418
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
||| || || ||||| || |||||
Sbjct 58419 TAAGGTCTTAACAAAGATTTGCAT 58442
Score = 105 bits (116), Expect = 4e-18
Identities = 140/192 (73%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575
||||| || ||||||||||| | || |||| | ||||| | ||| || || || ||
Sbjct 4331 TCCTTCTGGATGTTATAATCAGCCAGCGTTCTTCCATCTTCTAATTGCTTCCCAGCGAAA 4390
Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635
|| | | ||| ||||| |||| | || ||||| ||| ||| ||| | ||||| |
Sbjct 4391 ATCAGCCTCTGCTGGTCTGGCGCGATACCTTCCTTATCTTGGAT-TTTCGCCTTAACATT 4449
Query 34636 A-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694
| ||||||||| |||||| ||||||| || || ||||| |||||||| ||||| ||
Sbjct 4450 ATCAATTGTGTCCGAGCTCTCAACTTCCAATGTAATGGTTTTCCCGGTTAAGGTTTTAAC 4509
Query 34695 AAAAATCTGCAT 34706
||| || |||||
Sbjct 4510 AAAGATTTGCAT 4521
Score = 100 bits (110), Expect = 2e-16
Identities = 139/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575
||||| || ||||||||||| | || |||| | ||||| | ||| || || |||||
Sbjct 58708 TCCTTCTGGATGTTATAATCAGCCAGAGTTCTTCCATCTTCTAATTGCTTCCCAGCAAAA 58767
Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635
|| || | ||| || || || || | |||||||||||| ||| ||| | ||||| |
Sbjct 58768 ATCAACCTCTGCTGATCAGGTGGGATACCCTCCTTGTCT-TGAATTTTAGACTTAACATT 58826
Query 34636 -AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694
|| ||||| |||||| ||||||| || || ||||| || ||||| || || ||
Sbjct 58827 GTCTATCGTGTCCGAGCTCTCAACTTCCAACGTGATTGTTTTTCCAGTTAAGGTCTTAAC 58886
Query 34695 AAAAATCTGCAT 34706
|||||| |||||
Sbjct 58887 AAAAATTTGCAT 58898
Score = 93.3 bits (102), Expect = 3e-14
Identities = 140/194 (72%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575
||||||||||| |||||||||| || || | | ||||| | |||||| || |||||
Sbjct 58480 TCCTTTTGAATATTATAATCTGCGAGAGTCCTTCCATCTTCCAATTGTTTCCCTGCAAAA 58539
Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGT-CTGTGATCTTTTGTTTTAACGA 34634
|| | | ||| ||||| || || | |||||||| | |||| ||| || | || ||
Sbjct 58540 ATCAGTCTCTGCTGGTCTGGTGGGATACCCTCCTTATCCTGT-ATC-TTGGCCTTCACAT 58597
Query 34635 T-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693
| ||| || || |||||||| |||| || ||||| || || || ||||| ||||
Sbjct 58598 TGTCAATGGTATCAGAACTCTCCACCTCCAACGTGATCGTCTTCCCCGTCAACGTCTTCA 58657
Query 34694 CAAAAATCTGCATG 34707
|||| | |||||||
Sbjct 58658 CAAAGACCTGCATG 58671
Score = 89.7 bits (98), Expect = 3e-13
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574
|||||||||||| || ||||||| || || || | || || || ||||| || || ||
Sbjct 59163 CTCCTTTTGAATATTGTAATCTGCGAGAGTATGCCCATCCTCGAGCTGTTTTCCTGCGAA 59222
Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634
|| ||||| ||||| || || || | || || ||||| ||| ||| | ||||||
Sbjct 59223 GATCAAACGTTGTTGATCTGGTGGAATACCTTCTTTGTCCTGGAT-TTTGGCTTTAACAT 59281
Query 34635 T-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693
| || |||||| ||||| ||||| | |||| || || || || | || ||||
Sbjct 59282 TGTCGATCGTGTCTGAACTCTCAACTTCGAGAGTTACGGTCTTGCCAGTCAGGGTCTTCA 59341
Query 34694 CAAAAATCTGCAT 34706
|||| ||||||||
Sbjct 59342 CAAAGATCTGCAT 59354
Score = 86.0 bits (94), Expect = 4e-12
Identities = 151/215 (70%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553
|| ||| | ||||||||| |||||| || || || || || | ||||| | | ||
Sbjct 58002 CAGCACAAGATGGAGAGTAGACTCCTTCTGGATATTGTAGTCCGCCAGTGTCCTACCATC 58061
Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGT- 34612
|| | ||||| || ||||| || | | ||| ||||||||||| | || || || |
Sbjct 58062 CTCCAACTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCCGGCGGAATACCTTCTTTATC 58121
Query 34613 CTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATC 34671
|||| ||| || | || || | ||| |||||| |||||| ||||||| || ||
Sbjct 58122 CTGT-ATC-TTCGCCTTCACATTGTCAATCGTGTCTGAGCTCTCAACTTCCAATGTGATG 58179
Query 34672 GTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || ||||| ||||| ||||| || |||||
Sbjct 58180 GTCTTTCCCGTTAAGGTTTTAACAAAGATTTGCAT 58214
>seq20296
Length=523354
Score = 118 bits (130), Expect = 7e-22
Identities = 161/222 (73%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||||||||||||||| ||||| || ||||| ||||| | || |||||
Sbjct 452958 AGACGAAGCACCAAATGGAGAGTGGATTCCTTCTGGATGTTGTAATCAGCTAGGGTTCGG 452899
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || ||||| ||||| || || | ||||| |||||||| || | || |||
Sbjct 452898 CCATCCTCCAGCTGTTTTCCGGCGAAAATGAGCCGCTGCTGGTCCGGTGGAATGCCTTCC 452839
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| |||| |||| || ||| | |||||||| | || || || | |||
Sbjct 452838 TTGTCCTGGATC-TTTGCCTTCACGTTGTCGATTGTGTCGGAGGATTCGACCTCAAGGGT 452780
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709
|| || ||||| |||| |||||||| || |||||||| ||
Sbjct 452779 GATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATCTT 452738
>seq50574
Length=377344
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || || || | || ||||||||| || ||| |||||| |||||||| || || | |
Sbjct 94593 CCTCCCCTCAGCCTCAGCACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGCA 94652
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | ||||| | || || || |||||||||| | ||| ||||| || ||
Sbjct 94653 AGGGTGCGACCATCTTCCAACTGCTTTCCTGCAAATATTAGCCTCTGCTGGTCTGGGGGA 94712
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||| || | || ||| | ||| ||||| ||||| ||
Sbjct 94713 ATCCCCTCCTTGTCCTGGATC-TTGGCCTTGACGTTGTCAATGGTGTCAGAACTCTCGAC 94771
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | ||| || || || ||||| | ||||| || || ||||||||
Sbjct 94772 CTCAAGGGTGATGGTCTTGCCGGTGAGGGTTTTGACGAAGATCTGCAT 94819
>seq3636
Length=134301
Score = 104 bits (114), Expect = 1e-17
Identities = 147/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| ||| |||||||||||| || || || | ||| ||||| | || ||||| ||
Sbjct 15829 TGGAGGGTGGACTCCTTTTGAATATTGTAGTCGGCAAGAGTTCGTCCATCCTCAAGCTGC 15770
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| || ||||| || || | ||| ||||| || || | || |||||||| |||| ||
Sbjct 15769 TTTCCAGCAAAAATCAATCTCTGCTGGTCTGGAGGGATGCCTTCCTTGTCCTGGATC-TT 15711
Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| ||||| | ||| ||||| |||||| ||||| | ||| || || || || ||
Sbjct 15710 CGCCTTAACATTGTCAATGGTGTCCGAGCTCTCAACTTCGAGGGTGATGGTCTTCCCAGT 15651
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
|| || || || |||||||||||
Sbjct 15650 CAATGTCTTAACGAAAATCTGCAT 15627
Score = 100 bits (110), Expect = 2e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
|| || ||| |||||| || ||||| || || | ||| || ||| | |||||||| ||
Sbjct 15601 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTGCGCCCATCTTCAAGCTGC 15542
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| || ||||| || || | ||| || || || || | || |||||||| ||||||
Sbjct 15541 TTTCCAGCAAAGATCAACCTCTGCTGATCTGGAGGGATGCCTTCCTTGTCCTGGATCTTC 15482
Query 34624 TGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| || || | ||| ||||| |||||| || || | ||| || || || |||||
Sbjct 15481 -GCCTTCACATTGTCAATGGTGTCGGAGCTCTCAACCTCAAGGGTGATGGTCTTCCCGGT 15423
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
|| ||||| ||||||||||||||
Sbjct 15422 CAATGTTTTTACAAAAATCTGCAT 15399
Score = 100 bits (110), Expect = 2e-16
Identities = 155/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||| | || || ||| || || || ||||||||||| | ||| || ||
Sbjct 16300 AGACGAAGCACAAGGTGAAGGGTGGATTCTTTCTGGATGTTATAATCAGCAAGGGTACGA 16241
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || || ||||| ||||| || || | ||| || || || || | ||||||
Sbjct 16240 CCATCCTCCAGCTGCTTACCAGCAAAAATCAACCTCTGCTGATCTGGTGGAATACCCTCC 16181
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| ||| |||| ||| ||| || ||| || || ||||||||| |||| ||
Sbjct 16180 TTGTC-CTGAATCTTTGCTTTCACGTTATCAATAGTATCAGAGCTCTCCACCTCCAAAGT 16122
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || || |||| || || ||||| ||||||||
Sbjct 16121 GATAGTCTTCCCAGTTAGAGTCTTGACAAATATCTGCAT 16083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314525813370824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |