Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20otophora_20[genbank_20GCA_5F000715115.1_202014-06-05] 929,607 sequences; 2,689,351,490 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq15945 102 2e-16 seq470624 100 6e-16 seq271576 100 6e-16 seq444967 98.7 2e-15 seq413216 98.7 2e-15 seq411049 98.7 2e-15 seq330345 98.7 2e-15 seq162672 98.7 2e-15 seq160116 98.7 2e-15 seq159629 98.7 2e-15 seq142096 98.7 2e-15 seq103573 98.7 2e-15 seq86566 98.7 2e-15 seq38380 98.7 2e-15 seq28957 98.7 2e-15 seq13878 98.7 2e-15 seq8592 98.7 2e-15 seq6165 98.7 2e-15 seq76921 95.1 3e-14 seq21414 95.1 3e-14 seq882630 89.7 1e-12 seq20585 89.7 1e-12 seq49533 86.0 1e-11 seq11771 86.0 1e-11 >seq15945 Length=190123 Score = 102 bits (112), Expect = 2e-16 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 |||||||||||||||||| |||||||||| || || |||| || |||||||||||||||| Sbjct 105359 TTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 105418 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 105419 GCCCCACGGTGGGC 105432 >seq470624 Length=1220 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 201 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 260 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 261 CCCCACGGTGGGC 273 >seq271576 Length=25179 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 21663 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 21604 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 21603 CCCCACGGTGGGC 21591 >seq444967 Length=5828 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 4681 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 4622 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 4621 CCCACGGTGGGC 4610 >seq413216 Length=1357 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 279 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 220 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 219 CCCACGGTGGGC 208 >seq411049 Length=569 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 279 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 220 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 219 CCCACGGTGGGC 208 >seq330345 Length=7866 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 1290 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1349 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1350 CCCACGGTGGGC 1361 >seq162672 Length=7143 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 2526 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 2585 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2586 CCCACGGTGGGC 2597 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 3797 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 3856 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 3857 CCCACGGTGGGC 3868 >seq160116 Length=23994 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 20282 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 20341 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 20342 CCCACGGTGGGC 20353 >seq159629 Length=11127 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 8948 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 9007 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 9008 CCCACGGTGGGC 9019 >seq142096 Length=2171 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 664 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 723 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 724 CCCACGGTGGGC 735 >seq103573 Length=1623 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 131 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 190 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 191 CCCACGGTGGGC 202 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 1177 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1236 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1237 CCCACGGTGGGC 1248 >seq86566 Length=65489 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 62698 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 62757 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 62758 CCCACGGTGGGC 62769 >seq38380 Length=21484 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 20564 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 20505 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 20504 CCCACGGTGGGC 20493 >seq28957 Length=138746 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 96039 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 95980 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 95979 CCCACGGTGGGC 95968 >seq13878 Length=235898 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 57231 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 57172 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 57171 CCCACGGTGGGC 57160 >seq8592 Length=23316 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 12754 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 12813 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 12814 CCCACGGTGGGC 12825 >seq6165 Length=118990 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 75927 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 75986 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 75987 CCCACGGTGGGC 75998 >seq76921 Length=59472 Score = 95.1 bits (104), Expect = 3e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || ||||||||| |||||||| Sbjct 21933 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGAGTTCGAGC 21992 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 21993 CCCACGGTGGGC 22004 >seq21414 Length=106535 Score = 95.1 bits (104), Expect = 3e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 165707 CTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCG 165766 || |||||||||||||||| |||||||||| || || |||| || |||||||||||||| Sbjct 102921 CTAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCA 102862 Query 165767 AGCCCCACGATGGGC 165781 ||||||||| ||||| Sbjct 102861 AGCCCCACGGTGGGC 102847 >seq882630 Length=480 Score = 89.7 bits (98), Expect = 1e-12 Identities = 160/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 230390 TTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTA 230449 || |||| || || || | |||| |||||| | |||||||| | || ||| || Sbjct 443 TTGCAGATGCTGTGGAGATAGAAAGGGAGTTTGTGTGTGACGCGCTGCCTTGTGCGCTGG 384 Query 230450 TTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTG 230509 | || ||||| | || | ||| | | ||||| |||||||| || || | | || | Sbjct 383 TGGGAATGAATGGAGATTTGATGAGCAAATACATTGAATTCGTGGCTGATAGATTGTTGG 324 Query 230510 TTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCA 230569 ||| | ||||| || || ||||||| || |||| || |||| | |||||||| | Sbjct 323 ATGCTTTGGGTTATGATAAGTTGTACAATGCTCAGAATCCGTTTGATTGGATGGAGCTGA 264 Query 230570 TTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGA 230623 || | ||||||||||| || ||||| || ||| | || | || ||||||| Sbjct 263 TTAGTTTACAAGGGAAGACTAATTTCTTTGAGAAGAGAGTTGGGGAGTATCAGA 210 >seq20585 Length=196283 Score = 89.7 bits (98), Expect = 1e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 |||||| ||||| | ||| |||||||||| || || |||| || |||||||||||||||| Sbjct 59961 TTGCCCATCTAGTTTAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 60020 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 60021 GCCCCACGGTGGGC 60034 >seq49533 Length=19250 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||| |||| |||| Sbjct 7562 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTAGGTTTGAGC 7503 Query 165770 CCCACGATGGGC 165781 || ||| ||||| Sbjct 7502 CCTACGGTGGGC 7491 >seq11771 Length=274152 Score = 86.0 bits (94), Expect = 1e-11 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 152724 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 152783 Query 165770 CC 165771 || Sbjct 152784 CC 152785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1045224692374410