Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20otophora_20[genbank_20GCA_5F000715115.1_202014-06-05] 929,607 sequences; 2,689,351,490 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq508016 102 8e-17 >seq508016 Length=803 Score = 102 bits (112), Expect = 8e-17 Identities = 221/327 (68%), Gaps = 3/327 (1%) Strand=Plus/Minus Query 17214 CTTTTTCCTGTAG-GTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGT 17272 |||||| || || ||| | || |||| || | || || |||||||| ||||| || Sbjct 584 CTTTTTTCTTCAGAGTCCTTGATGTACGACTCTAGAAGCAGACTGTACATCTCGGAATGG 525 Query 17273 ATGTTCTCCATGGCTATCTGAAATCCGTA-AAAGCATCGGGCTTCCGCTATTTGAACTTC 17331 ||||| || || || || || || ||||| |||||| || || ||||| | ||| ||||| Sbjct 524 ATGTTTTCAATCGCGATTTGGAAGCCGTAGAAAGCA-CGCGCCTCCGCAACTTGGACTTC 466 Query 17332 CACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 ||| | | | ||||| ||||| ||||||||||| ||||||||||| || Sbjct 465 TTTCATGAACCTTCCGGCTAGGTTTTCTAAAACGATGCCGTCTGAGGCGGCGAAAAAGGC 406 Query 17392 CAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATC 17451 | | ||| | ||||||| ||||| | || || || ||||| ||| Sbjct 405 AAGGACATGAGTGATGAAATGCCTTTCGCCGGGAGTTAGGGTTTCCCAGTGACGGGTATC 346 Query 17452 TTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATT 17511 | |||| ||| ||||| || | ||||| ||| || | || ||||| ||||| | Sbjct 345 TGAAGATAAATCGACTTCCTCAGCAGTCCAGAAAGAGGCTAAGGCTTTTTTGTACATTTC 286 Query 17512 CCAAATATCATTGTATTGTATGGGGAA 17538 |||||| | |||||| || ||||| Sbjct 285 CCAAATTTGTGGGTATTGAATTGGGAA 259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511531674842760