Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20otophora_20[genbank_20GCA_5F000715115.1_202014-06-05] 929,607 sequences; 2,689,351,490 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq53084 120 3e-22 seq20754 104 3e-17 seq24017 102 9e-17 seq19970 102 9e-17 seq368178 100 3e-16 seq131271 98.7 1e-15 seq57534 95.1 1e-14 seq22395 93.3 5e-14 seq914224 91.5 2e-13 seq1350 91.5 2e-13 seq4751 89.7 6e-13 seq39326 87.8 2e-12 seq204777 84.2 2e-11 seq532142 82.4 9e-11 seq438842 82.4 9e-11 seq47031 82.4 9e-11 seq40469 82.4 9e-11 seq11276 82.4 9e-11 seq10275 82.4 9e-11 >seq53084 Length=45269 Score = 120 bits (132), Expect = 3e-22 Identities = 160/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||||||| | ||| ||||| || || ||||||||||| || || || | Sbjct 6796 ACGGAGCACCAAATGGAGAGTGGATTCCTTCTGGATGTTGTAATCAGCTAGGGTTCGGCC 6737 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || ||||| || || ||||| ||||| ||||||||||| | || | || ||||| Sbjct 6736 ATCCTCCAGCTGTTTTCCGGCGAAAATGAGCCGCTGCTGGTCCGGTGGAATGCCTTCCTT 6677 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 |||| ||| ||| || | ||| | | | |||||| ||||| || || | |||| Sbjct 6676 GTCCTGGATCTTTGCCTTCA-CGTTGTCGATTGTGTCGGAGGATTCGACCTCAAGGGTGA 6618 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 |||| || |||||||| || || || ||||| ||||| || Sbjct 6617 TGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATCTT 6578 >seq20754 Length=265263 Score = 104 bits (114), Expect = 3e-17 Identities = 143/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||||||||||||||||||||| ||||| || | || || |||||||| ||||| || Sbjct 216870 CTCCTTTTGAATATTGTAATCAGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAA 216929 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || | ||||||||| | || | | ||||||| | ||| |||| | || | Sbjct 216930 GATCAGCCTCTGCTGGTCTGGGGGAATCCCTTCCTTGT-CTTGAATTTTGGCCTTCACGT 216988 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| ||| || || |||| || |||||||| || || || |||| Sbjct 216989 TATCAATTGTGTCTGAACTC---TCAACCTCGAGAGTAATGGTTTTTCCAGTGAGTGTCT 217045 Query 43168 TTACAAAGATTTGCAT 43183 |||||||||| ||||| Sbjct 217046 TTACAAAGATCTGCAT 217061 Score = 93.3 bits (102), Expect = 5e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 |||||||||||||||||||| || || || ||| | || || |||||||||||||| ||| Sbjct 215959 TCCTTTTGAATATTGTAATCTGCAAGGGTGCGCCCATCCTCCAGCTGCTTACCAGCAAAT 216018 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| | |||||| || | || | | || || ||| ||| |||| | | ||| Sbjct 216019 ATGAGCCTCTGCTGATCTGGTGGGATCCCTTCTTTATCC-TGAATTTTGGCCTTCACGTT 216077 Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | ||||| |||| ||||| || | |||||||| || || || | || || Sbjct 216078 GTCAATAGTGTCAGAGCTC---TCCACTTCCAAAGTGATGGTCTTTCCTGTCAAAGTTTT 216134 Query 43169 TACAAAGATTTGCAT 43183 ||||| || ||||| Sbjct 216135 GACAAATATCTGCAT 216149 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||||||||||||||||||||| ||||| || | || || |||||||| ||||| || Sbjct 216642 CTCCTTTTGAATATTGTAATCAGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAA 216701 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || | ||||||||| | || | | ||||||| | ||| |||| | || | Sbjct 216702 GATCAGCCTCTGCTGGTCTGGGGGAATCCCTTCCTTGT-CTTGAATTTTCGCCTTCACGT 216760 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| ||| || || || | || ||||||||||| || || || | Sbjct 216761 TATCAATTGTGTCTGAACTC---TCGACCTCAAGAGTAATGGTTTTGCCGGTAAGAGTTT 216817 Query 43168 TTACAAAGATTTGCAT 43183 | ||||| || ||||| Sbjct 216818 TAACAAATATCTGCAT 216833 >seq24017 Length=104150 Score = 102 bits (112), Expect = 9e-17 Identities = 142/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 |||||||| || ||||| || || ||||| || | || ||||||||||| ||||| || Sbjct 2885 TCCTTTTGGATGTTGTAGTCGGCAAGAGTGCGGCCATCCTCTAGCTGCTTTCCAGCAAAG 2944 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 || | | |||||| |||| || | | ||||||||| ||| | || | |||| | Sbjct 2945 ATCAACCTCTGCTGATCGGGAGGGATTCCTTCCTTGTCC-TGAATCTTAGCCTTGACATT 3003 Query 43112 CGCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | |||||| ||| || || |||| || |||||||| || || |||||||| Sbjct 3004 ATCAATAGTGTCGGAACTC---TCAACCTCGAGAGTAATGGTTTTTCCGGTAAGCGTCTT 3060 Query 43169 TACAAAGATTTGCAT 43183 ||||||||||||||| Sbjct 3061 TACAAAGATTTGCAT 3075 Score = 102 bits (112), Expect = 9e-17 Identities = 142/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 |||||||| || ||||| || || ||||| || | || ||||||||||| ||||| || Sbjct 5808 TCCTTTTGGATGTTGTAGTCGGCAAGAGTGCGGCCATCCTCTAGCTGCTTTCCAGCAAAG 5867 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 || | | |||||| |||| || | | ||||||||| ||| | || | |||| | Sbjct 5868 ATCAACCTCTGCTGATCGGGAGGGATTCCTTCCTTGTCC-TGAATCTTAGCCTTGACATT 5926 Query 43112 CGCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | |||||| ||| || || |||| || |||||||| || || |||||||| Sbjct 5927 ATCAATAGTGTCGGAACTC---TCAACCTCGAGAGTAATGGTTTTTCCGGTAAGCGTCTT 5983 Query 43169 TACAAAGATTTGCAT 43183 ||||||||||||||| Sbjct 5984 TACAAAGATTTGCAT 5998 Score = 100 bits (110), Expect = 3e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || ||||| | ||||||||||| ||| ||| || || |||||||||||||| Sbjct 2165 CCTCCCCTCAAACGGAGAACCAAATGCAACGTGGACTCTTTCTGGATATTGTAATCAGCA 2224 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 43069 || |||| | | || || |||||||||||||| || || | ||||||||| || Sbjct 2225 AGGGTCCTCCCATCCTCAAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATC 2277 >seq19970 Length=23264 Score = 102 bits (112), Expect = 9e-17 Identities = 158/222 (71%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 42964 TTAA-ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTC 43022 |||| ||||||||| | ||| | ||| ||||| ||||||||||||||||| || || Sbjct 94 TTAAGACGCAACACAAGATGGAGAGTGGATTCCTTCTGAATATTGTAATCAGCAAGTGTT 153 Query 43023 CGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTC 43082 || | || || || || || ||||| || || | | || || || | || | | Sbjct 154 CGACCATCTTCAAGTTGTTTTCCAGCAAAAATTAACCTTTGTTGATCTGGAGGAATTCCT 213 Query 43083 TCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGAC 43141 ||||||| | ||| ||||||||| | | | | | | |||||| || || |||| Sbjct 214 TCCTTGT-CTTGAATTTTTGTTTTAACATTGTCAATAGTGTCGGAGTTCTCAACCTCGAG 272 Query 43142 CGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||||||| || ||||| ||||| |||||||||||||| Sbjct 273 TGTAATGGTTTTTCCAGTTAGTGTCTTAACAAAGATTTGCAT 314 >seq368178 Length=4824 Score = 100 bits (110), Expect = 3e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || |||||||| || || || || |||| || |||||||| || ||||| Sbjct 3408 CTCCTTCTGGATGTTGTAATCGGCTAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 3467 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | || | | |||||||| ||| || ||| | | Sbjct 3468 AATCAGACGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGGATCTTGGCTTTCACATT 3527 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| ||||| || || | ||||| ||||| |||||||| || || || Sbjct 3528 GTCGATTGTGTCGGAAGATTCAACCTCAAGGGTGATTGTTTTACCCGTTAGGGTTTTGAC 3587 Query 43172 AAAGATTTGCATTTT 43186 ||||| ||||| || Sbjct 3588 GAAGATCTGCATCTT 3602 >seq131271 Length=1147 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/228 (71%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| | | ||||||||| | ||| | ||| ||||| ||||||||||||||||| Sbjct 330 CCTCCGCGAAGACGCAACACAAGATGGAGAGTGGATTCCTTCTGAATATTGTAATCAGCA 271 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || || || || || ||||| || || | | || || || | || Sbjct 270 AGTGTTCGACCATCTTCAAGTTGTTTTCCAGCAAAAATTAACCTTTGTTGATCTGGAGGA 211 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 43135 | || ||||||| | ||| ||||||||| | | | | | | |||||| || || Sbjct 210 ATCCT-TCCTTGT-CTTGAATTTTTGTTTTAACATTGTCAATAGTGTCGGAGTTCTCAAC 153 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || ||||| || || ||||| ||||| |||||||||||||| Sbjct 152 CTCGAGTGTAATGGTCTTTCCAGTTAGTGTCTTAACAAAGATTTGCAT 105 >seq57534 Length=59227 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| || | | || ||||||||||| ||| |||||| ||||| ||||| || || Sbjct 10066 TCCTCCCCTCAGCCTCAGCACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGC 10125 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || | || || | |||||| || || || || || | ||||||||| | || Sbjct 10126 AAGGGTGCGACCATCTTCCAACTGCTTTCCTGCAAAGATCAGCCTCTGCTGGTCTGGGGG 10185 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 43134 | | |||||||||| ||| || |||| ||| | | | ||||| ||| | Sbjct 10186 AATCCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATAGTGTCAGAACTTTCAA 10244 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || | |||||||| ||||| || || || || || ||||| ||||| Sbjct 10245 CCTCCAGTGTGATGGTCTTGCCGGTGAGGGTTTTGACGAAGATCTGCAT 10293 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/197 (71%), Gaps = 12/197 (6%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||||||||| || || || | || || |||||||| |||||||| Sbjct 10331 TCCTTCTGGATGTTGTAATCAGCTAGGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAG 10390 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG---TTTGAGC 43109 || | | ||||||||| | || | || |||||| ||| ||| |||| | || | Sbjct 10391 ATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTATCC-TGAATTTTGGCCTTTACATT 10449 Query 43110 GTCGCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTC 43166 |||| | |||||| ||| || || || | |||||||| ||||| || || || Sbjct 10450 GTCG--ATGGTGTCGGAACTC---TCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTT 10504 Query 43167 TTTACAAAGATTTGCAT 43183 || || ||||| ||||| Sbjct 10505 TTGACGAAGATCTGCAT 10521 >seq22395 Length=162664 Score = 93.3 bits (102), Expect = 5e-14 Identities = 141/197 (72%), Gaps = 8/197 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| |||||||||||||| || || |||| | || || | |||||| ||||| || Sbjct 26669 CTCCTTCTGAATATTGTAATCTGCAAGTGTCCTACCATCCTCCAACTGCTTCCCAGCAAA 26728 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || | ||| ||||| | || | | |||||| ||| ||| | || | || | Sbjct 26729 GATAAGCCTCTGTTGGTCTGGTGGAATACCCTCCTTATCC-TGAATCTTCGCCTTCACAT 26787 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | |||||| |||| || || || | ||||||||||| ||||||| || | Sbjct 26788 TGTCAATCGTGTCTGAGCTC---TCAACTTCTAATGTGATGGTTTTTCCCGTTAAGGTTT 26844 Query 43168 TTACAAAGATTTGCATT 43184 | ||||||||||||||| Sbjct 26845 TAACAAAGATTTGCATT 26861 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || || |||||||||||||| | | || |||| ||||| ||||| || Sbjct 110516 TCCTTCTGGATGTTATAATCAGCCAGAGTTCTTCCATCTTCTAATTGCTTCCCAGCAAAA 110575 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || | | |||||| || | || | | |||||||| | ||| |||||| | | | | Sbjct 110576 ATCAACCTCTGCTGATCAGGTGGGATACCCTCCTTGT-CTTGAATTTTTGCCTTAACATT 110634 Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | ||| || |||| || || || | |||||| ||||| || |||| ||||| Sbjct 110635 GTCTATCGTATCCGAGCTC---TCAACTTCCAACGTGATTGTTTTTCCAGTTAAGGTCTT 110691 Query 43169 TACAAAGATTTGCAT 43183 ||||| |||||||| Sbjct 110692 AACAAAAATTTGCAT 110706 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/202 (70%), Gaps = 8/202 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||||| ||||||||| || ||||| ||| | || || ||||| || || || || Sbjct 110971 CTCCTTTTGAAAATTGTAATCTGCGAGAGTACGCCCATCCTCGAGCTGTTTTCCTGCAAA 111030 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | || ||||| || | || | | || |||||| ||| |||| | || | | | Sbjct 111031 GATCAAACGTTGCTGATCTGGTGGAATACCTTCTTTGTCC-TGAATTTTGGCTTTAACAT 111089 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | |||||| ||| || || |||| || || || ||||| || || |||| Sbjct 111090 TGTCGATCGTGTCTGAACTC---TCAACTTCGAGAGTTATAGTCTTGCCAGTCAGGGTCT 111146 Query 43168 TTACAAAGATTTGCATTTTTAC 43189 | ||||| || ||||| | ||| Sbjct 111147 TCACAAATATCTGCATCTGTAC 111168 Score = 82.4 bits (90), Expect = 9e-11 Identities = 136/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || || ||||||||||| || | | || |||| ||||| |||||||| Sbjct 27126 TCCTTCTGGATGTTATAATCAGCCAGTGTTCTTCCATCTTCTAATTGCTTCCCAGCGAAA 27185 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || | ||||||||| | ||| | | ||||| || ||||||| || | | Sbjct 27186 ATCAGCCTCTGCTGGTCTGGCGGGATACCTTCCTTATCTTGGATTTTTGCCTTAACATTA 27245 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | ||||| |||| || || || | || |||||||| || |||| || || Sbjct 27246 TCAATTGTGTCCGAGCTC---TCAACTTCCAATGTAATGGTTTTCCCGGTTAAGGTTTTA 27302 Query 43170 ACAAAGATTTGCATT 43184 ||||||||||||||| Sbjct 27303 ACAAAGATTTGCATT 27317 Score = 82.4 bits (90), Expect = 9e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||||||||| ||||| || ||||| ||| | || || | ||||| || || || Sbjct 27581 CTCCTTTTGAATATTATAATCTGCGAGAGTACGCCCATCTTCCAATTGCTTCCCTGCAAA 27640 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||| || | |||||| || | || | | ||| |||| | || |||| | | | | | Sbjct 27641 TATCAGCCTCTGCTGATCCGGTGGGATACCCTCTTTGT-CTTGTATTTTCGCCTTAACAT 27699 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| ||| ||| || || | ||||||||||| || |||| || | Sbjct 27700 TGTCTATGGTGTCCGAGCT---TTCAACTTCCAGTGTGATGGTTTTTCCAGTTAAGGTTT 27756 Query 43168 TTACAAAGATTTGCAT 43183 | |||||||| ||||| Sbjct 27757 TAACAAAGATCTGCAT 27772 >seq914224 Length=857 Score = 91.5 bits (100), Expect = 2e-13 Identities = 138/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||| |||||||| ||||| ||||| || | || |||| |||||| ||||| || Sbjct 242 CTCCTTTTGGATATTGTAGTCAGCAAGAGTTCGGCCATCCTCTAACTGCTTTCCAGCAAA 183 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | | ||||| || | || | | ||||| || ||| ||| || | | Sbjct 182 GATCAACCTTTGCTGATCTGGAGGAATTCCTTCCTTATCTTGGATCTTTGCCTTAACATT 123 Query 43112 CGCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | |||||| ||| || || |||| |||||||||||||| || || ||||| Sbjct 122 GTCGATAGTGTCGGAACTC---TCAACCTCGAGGGTGATGGTTTTGCCAGTGAGGGTCTT 66 Query 43169 TACAAAGATTTGCAT 43183 |||||||||||||| Sbjct 65 AACAAAGATTTGCAT 51 >seq1350 Length=82824 Score = 91.5 bits (100), Expect = 2e-13 Identities = 113/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || |||||||| |||||||| | || |||||| || || || || || || Sbjct 7997 CCTCCCCTCAAACGCAAGACCAAATGGAGAGTCGACTCCTTCTGGATGTTATAGTCCGCA 8056 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||||| |||| || || || |||||||| || || | ||||||||||| | ||| Sbjct 8057 AGAGTCCTGCCGTCCTCCAGTTGTTTACCAGCAAAGATCAAACGCTGCTGGTCTGGCGGG 8116 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGA 43107 | | |||||||| | ||| | |||| ||||| Sbjct 8117 ATACCCTCCTTGT-CTTGAATCTTTGCTTTGA 8147 >seq4751 Length=108506 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||||||| || || ||| ||||||||| |||| |||||||||||||||| ||||| Sbjct 68029 AAAATTTTCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATACT 68088 Query 60118 CACCACTATACTAC 60131 |||||||||||||| Sbjct 68089 CACCACTATACTAC 68102 >seq39326 Length=18362 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||||||||| || || || | || || | |||||||||||| || Sbjct 8262 TCCTTCTGGATGTTGTAATCAGCTAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAG 8321 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || | | |||||| || | || | | ||||||||| ||| | || | | | ||| Sbjct 8322 ATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTGTCC-TGAATCTTCGCCTTAACGTT 8380 Query 43113 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||| ||| || || | ||||| ||||| || ||||| || || || Sbjct 8381 GTCAATTGTGTCGGAGCTTTCGACTTCAAGGGTGATTGTTTTCCCGGTTAGGGTTTTGAC 8440 Query 43172 AAAGATTTGCAT 43183 |||||||||||| Sbjct 8441 AAAGATTTGCAT 8452 >seq204777 Length=17994 Score = 84.2 bits (92), Expect = 2e-11 Identities = 65/75 (87%), Gaps = 3/75 (4%) Strand=Plus/Minus Query 60059 AAATTTTCTCCTCG--GCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||||| | ||| || ||||| ||||||| |||| ||||||||||||||||| |||| Sbjct 9412 AAATTTTGGCGTCGTTGCCGGGAAACGAACCCGGGTCACCCGCGTGACAGGCGGA-ATAC 9354 Query 60117 TCACCACTATACTAC 60131 ||||||||||||||| Sbjct 9353 TCACCACTATACTAC 9339 >seq532142 Length=849 Score = 82.4 bits (90), Expect = 9e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 42996 TTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATG 43055 ||||| ||||| ||||||||||| || ||| | || || ||||| |||||||| || || Sbjct 537 TTTTGGATATTATAATCAGCCAGTGTACGCCCATCTTCAAGCTGTTTACCAGCAAAGATC 596 Query 43056 AGTCGCTGCTGGTCGGCCGG 43075 |||||||||||||| | ||| Sbjct 597 AGTCGCTGCTGGTCCGGCGG 616 >seq438842 Length=8377 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | || || || ||| ||||||||| |||| |||||||||||||||| |||| Sbjct 3811 AAAAAGTATCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 3870 Query 60117 TCACCACTATACTAC 60131 ||||||||||||||| Sbjct 3871 TCACCACTATACTAC 3885 >seq47031 Length=41630 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||| || || ||| ||||||||| |||| |||||||||||||||| |||| Sbjct 20124 AAAAAATTTCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 20065 Query 60117 TCACCACTATACTAC 60131 | ||||||||||||| Sbjct 20064 TTACCACTATACTAC 20050 >seq40469 Length=154372 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 || ||| ||| || || ||| ||||||||| |||| |||||||||||||||| |||| Sbjct 52102 AATAATATTCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 52161 Query 60117 TCACCACTATACTAC 60131 ||||||||||||||| Sbjct 52162 TCACCACTATACTAC 52176 >seq11276 Length=12596 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | || || || ||| ||||||||| |||| |||||||||||||||| |||| Sbjct 7497 AAAAAGTATCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 7438 Query 60117 TCACCACTATACTAC 60131 ||||||||||||||| Sbjct 7437 TCACCACTATACTAC 7423 >seq10275 Length=89473 Score = 82.4 bits (90), Expect = 9e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||||||||| || || || | || || | |||||||||||| || Sbjct 10706 TCCTTCTGGATGTTGTAATCAGCTAGGGTTCGGCCATCTTCCAACTGCTTACCAGCAAAG 10765 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || | | ||| || || | || | | ||||||||| ||| | || | | | ||| Sbjct 10766 ATCAACCTCTGTTGATCTGGTGGGATTCCTTCCTTGTCC-TGAATCTTCGCCTTAACGTT 10824 Query 43113 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||| ||| || || | ||||| ||||| || ||||| || || || Sbjct 10825 GTCAATTGTGTCGGAGCTTTCGACTTCAAGGGTGATTGTTTTCCCGGTTAGGGTTTTGAC 10884 Query 43172 AAAGATTTGCAT 43183 |||||||||||| Sbjct 10885 AAAGATTTGCAT 10896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565173029453960