Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20otophora_20[genbank_20GCA_5F000715115.1_202014-06-05] 929,607 sequences; 2,689,351,490 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq882630 96.9 3e-15 >seq882630 Length=480 Score = 96.9 bits (106), Expect = 3e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 15929 GACATAACTGACATTTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCT 15988 |||||||| || ||| ||||| || | ||||||||| ||||||||||| || || ||| Sbjct 194 GACATAACAGAAGCTTTCTGATACTCCCCAACTCTCTTCTCAAAGAAATTAGTCTTCCCT 253 Query 15989 TCTAATGAAATATTTTCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCAT 16048 | ||| ||| ||||| ||||||| ||||| | | | || | ||||| | Sbjct 254 TGTAAACTAATCAGCTCCATCCAATCAAACGGATTCTGAGCATTGTACAACTTATCATAA 313 Query 16049 CCCAATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAG 16108 ||||| | ||| |||||||| ||||| ||||| || || | |||| ||||| | Sbjct 314 CCCAAAGCATCCAACAATCTATCAGCCACGAATTCAATGTATTTGCTCATCAAATCTCCA 373 Query 16109 TTCATTCC 16116 |||||||| Sbjct 374 TTCATTCC 381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 457137570090200