Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20otophora_20[genbank_20GCA_5F000715115.1_202014-06-05] 929,607 sequences; 2,689,351,490 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq389919 118 5e-22 seq260022 118 5e-22 seq110603 118 5e-22 seq32074 116 2e-21 seq7781 114 7e-21 seq529606 113 2e-20 seq117202 113 2e-20 seq531985 111 8e-20 seq211539 111 8e-20 seq74977 111 8e-20 seq28935 111 8e-20 seq25253 111 8e-20 seq15075 111 8e-20 seq7528 111 8e-20 seq5430 111 8e-20 seq3039 111 8e-20 seq2619 111 8e-20 seq123626 109 3e-19 seq21617 109 3e-19 seq16655 109 3e-19 seq105001 105 3e-18 seq99877 105 3e-18 seq801891 104 1e-17 seq702410 104 1e-17 seq256833 100 1e-16 seq5149 98.7 5e-16 seq12079 93.3 2e-14 seq614699 91.5 8e-14 seq392199 87.8 9e-13 seq929467 82.4 4e-11 >seq389919 Length=7177 Score = 118 bits (130), Expect = 5e-22 Identities = 79/89 (89%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||||| ||| | ||||||||| | | |||||||| ||||||||||||||||||||| Sbjct 5836 AATAAAATATCGTACTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 5895 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 5896 GACGCTCTAACCAACTGAGCTAATGGGCC 5924 >seq260022 Length=10471 Score = 118 bits (130), Expect = 5e-22 Identities = 79/89 (89%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||||| ||| | ||||||||| | | |||||||| ||||||||||||||||||||| Sbjct 35 AATAAAATATCGTACTGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCAC 94 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 95 GACGCTCTAACCAACTGAGCTAATGGGCC 123 >seq110603 Length=28862 Score = 118 bits (130), Expect = 5e-22 Identities = 76/84 (90%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 ||||| | ||||||||||| | | |||||||| |||||||||||||||||||||||||| Sbjct 26164 AAAATAATATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGC 26105 Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529 ||| |||||||||||||||||||| Sbjct 26104 TCTAACCAACTGAGCTAATGGGCC 26081 Score = 118 bits (130), Expect = 5e-22 Identities = 76/84 (90%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 ||||| | ||||||||||| | | |||||||| |||||||||||||||||||||||||| Sbjct 27937 AAAATAATATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGC 27878 Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529 ||| |||||||||||||||||||| Sbjct 27877 TCTAACCAACTGAGCTAATGGGCC 27854 >seq32074 Length=106334 Score = 116 bits (128), Expect = 2e-21 Identities = 72/78 (92%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | ||||||||| ||||||||||||||||||||||||||||| || Sbjct 7919 AAAGTGGCCCATGCAGGTATCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 7978 Query 11512 CAACTGAGCTAATGGGCC 11529 |||||||||||||||||| Sbjct 7979 CAACTGAGCTAATGGGCC 7996 >seq7781 Length=232855 Score = 114 bits (126), Expect = 7e-21 Identities = 74/82 (90%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 11448 AATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTC 11507 ||| || |||||||||| | | |||||||| |||||||||||||||||||||||||||| Sbjct 142361 AATAAACTTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTC 142302 Query 11508 TRACCAACTGAGCTAATGGGCC 11529 | |||||||||||||||||||| Sbjct 142301 TAACCAACTGAGCTAATGGGCC 142280 >seq529606 Length=1208 Score = 113 bits (124), Expect = 2e-20 Identities = 74/81 (91%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 11452 AAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRA 11510 |||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| | Sbjct 737 AAATATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAA 796 Query 11511 CCAACTGAGCTAATGGGCCGT 11531 ||||||||||||||||||||| Sbjct 797 CCAACTGAGCTAATGGGCCGT 817 >seq117202 Length=2245 Score = 113 bits (124), Expect = 2e-20 Identities = 75/84 (89%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 ||||| | |||||||||| | | |||||||| |||||||||||||||||||||||||| Sbjct 1118 AAAATAGATTTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGC 1177 Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529 ||| |||||||||||||||||||| Sbjct 1178 TCTAACCAACTGAGCTAATGGGCC 1201 >seq531985 Length=2991 Score = 111 bits (122), Expect = 8e-20 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 2384 TTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 2325 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 2324 CTGAGCTAATGGGCC 2310 >seq211539 Length=9248 Score = 111 bits (122), Expect = 8e-20 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 1205 TTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 1264 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 1265 CTGAGCTAATGGGCC 1279 >seq74977 Length=18945 Score = 111 bits (122), Expect = 8e-20 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 18446 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 18387 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 18386 TGAGCTAATGGGCCG 18372 >seq28935 Length=1341 Score = 111 bits (122), Expect = 8e-20 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 191 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 250 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 251 TGAGCTAATGGGCCG 265 Score = 111 bits (122), Expect = 8e-20 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1117 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 1176 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 1177 TGAGCTAATGGGCCG 1191 >seq25253 Length=227706 Score = 111 bits (122), Expect = 8e-20 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 89422 TTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 89363 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 89362 CTGAGCTAATGGGCC 89348 >seq15075 Length=28557 Score = 111 bits (122), Expect = 8e-20 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 1019 TTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 1078 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 1079 CTGAGCTAATGGGCC 1093 >seq7528 Length=250812 Score = 111 bits (122), Expect = 8e-20 Identities = 78/89 (88%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 11443 TAAAAAATCA--AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||||| || || ||||||||| | | |||||||| ||||||||||||||||||||| Sbjct 40083 TAAAAAACCAGGAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 40142 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| ||||||||||||||| |||| Sbjct 40143 GACGCTCTAACCAACTGAGCTAATAGGCC 40171 >seq5430 Length=192205 Score = 111 bits (122), Expect = 8e-20 Identities = 79/90 (88%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 11441 AATAAAAAATCAA-ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 |||||||| | | | ||||||||| | | |||||||| |||||||||||||||||||| Sbjct 56658 AATAAAAAGTTGATAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCA 56599 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||| |||||||||||||||||||| Sbjct 56598 CGACGCTCTAACCAACTGAGCTAATGGGCC 56569 >seq3039 Length=31402 Score = 111 bits (122), Expect = 8e-20 Identities = 71/78 (91%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 10649 AAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 10708 Query 11512 CAACTGAGCTAATGGGCC 11529 |||||||||||||||||| Sbjct 10709 CAACTGAGCTAATGGGCC 10726 >seq2619 Length=205235 Score = 111 bits (122), Expect = 8e-20 Identities = 76/85 (89%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 11446 AAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 |||| |||| ||||||||| | | |||||||| ||||||||||||||||||||||||| Sbjct 31907 AAAACAAAATATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACG 31848 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||||||||| Sbjct 31847 CTCTAACCAACTGAGCTAATGGGCC 31823 >seq123626 Length=39705 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 36780 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 36839 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 36840 TGAGCTAATGGGCC 36853 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 38755 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 38814 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 38815 TGAGCTAATGGGCC 38828 >seq21617 Length=194051 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 51030 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 50971 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 50970 TGAGCTAATGGGCC 50957 >seq16655 Length=75594 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 69904 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 69963 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 69964 TGAGCTAATGGGCC 69977 >seq105001 Length=122043 Score = 105 bits (116), Expect = 3e-18 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 || ||||||||| | | | |||||| ||||||||||||||||||||||||||||| ||| Sbjct 117432 AAATGGCCCATGCAGGTCTTGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACC 117373 Query 11513 AACTGAGCTAATGGGCC 11529 ||||||||||||||||| Sbjct 117372 AACTGAGCTAATGGGCC 117356 >seq99877 Length=31862 Score = 105 bits (116), Expect = 3e-18 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 || ||||||||| | | |||||||| |||||||||||||||||||||| |||||| ||| Sbjct 29706 AAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGGCGCTCTAACC 29647 Query 11513 AACTGAGCTAATGGGCC 11529 ||||||||||||||||| Sbjct 29646 AACTGAGCTAATGGGCC 29630 >seq801891 Length=310 Score = 104 bits (114), Expect = 1e-17 Identities = 59/61 (97%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 11471 TCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 4 TCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 63 Query 11531 T 11531 | Sbjct 64 T 64 >seq702410 Length=248 Score = 104 bits (114), Expect = 1e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| |||||||||||||||||||||| |||||| |||||| Sbjct 83 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGTCGCTCTAACCAAC 142 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 143 TGAGCTAATGGGCC 156 >seq256833 Length=621 Score = 100 bits (110), Expect = 1e-16 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 11471 TCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 2 TCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 60 >seq5149 Length=537491 Score = 98.7 bits (108), Expect = 5e-16 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513 ||||||||||| | | |||||||| ||||||| |||||||||||||||| |||| |||| Sbjct 6067 ATTGGCCCATGCAGGTCTCGAACCTGCGACCTTTGCGTTATTAGCACGACACTCTAACCA 6008 Query 11514 ACTGAGCTAATGGGCC 11529 ||||||||||| |||| Sbjct 6007 ACTGAGCTAATAGGCC 5992 >seq12079 Length=75836 Score = 93.3 bits (102), Expect = 2e-14 Identities = 84/104 (81%), Gaps = 7/104 (7%) Strand=Plus/Plus Query 11429 AAATATAGAATTAA-TAAAAAATCAAATTGGCCCATGAAAGGATCGA--ACCTTCGACCT 11485 ||| | | ||| || ||||| ||| ||||| ||| | | |||| |||| |||||| Sbjct 35726 AAAAAAAAAATCAACTAAAACATC----TGGCCTATGCAGGTCTCGAGAACCTGCGACCT 35781 Query 11486 TCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||| || ||||||||||||||||| Sbjct 35782 TCGCGTTATTAGCACGACGCTCTAACTAACTGAGCTAATGGGCC 35825 >seq614699 Length=219 Score = 91.5 bits (100), Expect = 8e-14 Identities = 57/62 (92%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | ||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 158 TGGCCCATGCAGGTATCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 217 Query 11516 TG 11517 || Sbjct 218 TG 219 >seq392199 Length=451 Score = 87.8 bits (96), Expect = 9e-13 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 11480 CGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 2 CGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 51 >seq929467 Length=4266 Score = 82.4 bits (90), Expect = 4e-11 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand=Plus/Minus Query 11442 ATAAAAAATCAA-ATTG--GCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 ||||||||| | |||| ||||||| | | |||||||| ||||||||||||||||||| Sbjct 75 ATAAAAAATGATTATTGTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGC 16 Query 11499 ACGACGCTCTRACCA 11513 |||||||||| |||| Sbjct 15 ACGACGCTCTAACCA 1 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 258528613141132