Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20otophora_20[genbank_20GCA_5F000715115.1_202014-06-05] 929,607 sequences; 2,689,351,490 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq53084 125 8e-24 seq20754 104 3e-17 seq368178 102 9e-17 seq24017 102 9e-17 seq19970 102 9e-17 seq131271 100 3e-16 seq22395 96.9 4e-15 seq57534 93.3 5e-14 seq914224 91.5 2e-13 seq39326 91.5 2e-13 seq10275 87.8 2e-12 seq1350 87.8 2e-12 >seq53084 Length=45269 Score = 125 bits (138), Expect = 8e-24 Identities = 162/221 (73%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||||||||| | ||| ||||| || || ||||||||||| || || || | Sbjct 6796 ACGGAGCACCAAATGGAGAGTGGATTCCTTCTGGATGTTGTAATCAGCTAGGGTTCGGCC 6737 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || ||||| || || ||||| ||||| ||||||||||| | ||| | || ||||| Sbjct 6736 ATCCTCCAGCTGTTTTCCGGCGAAAATGAGCCGCTGCTGGTCCGGTGGAATGCCTTCCTT 6677 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 |||| ||| ||| || | ||| | | | |||||| ||||| || || | |||| Sbjct 6676 GTCCTGGATCTTTGCCTTCA-CGTTGTCGATTGTGTCGGAGGATTCGACCTCAAGGGTGA 6618 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTC 42212 |||| || |||||||| || || || ||||| ||||| ||| Sbjct 6617 TGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATCTTC 6577 >seq20754 Length=265263 Score = 104 bits (114), Expect = 3e-17 Identities = 143/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||||||||||||||||||||| ||||| || | || || |||||||| ||||| || Sbjct 216870 CTCCTTTTGAATATTGTAATCAGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAA 216929 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || || | ||||||||| | || | | ||||||| | ||| |||| | || | Sbjct 216930 GATCAGCCTCTGCTGGTCTGGGGGAATCCCTTCCTTGT-CTTGAATTTTGGCCTTCACGT 216988 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| ||| || || |||| || |||||||| || || || |||| Sbjct 216989 TATCAATTGTGTCTGAACTC---TCAACCTCGAGAGTAATGGTTTTTCCAGTGAGTGTCT 217045 Query 42193 TTACAAAGATTTGCAT 42208 |||||||||| ||||| Sbjct 217046 TTACAAAGATCTGCAT 217061 Score = 98.7 bits (108), Expect = 1e-15 Identities = 141/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 |||||||||||||||||||| || || || ||| | || || |||||||||||||| ||| Sbjct 215959 TCCTTTTGAATATTGTAATCTGCAAGGGTGCGCCCATCCTCCAGCTGCTTACCAGCAAAT 216018 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| | |||||| || | ||| | | || || ||| ||| |||| | | ||| Sbjct 216019 ATGAGCCTCTGCTGATCTGGTGGGATCCCTTCTTTATCC-TGAATTTTGGCCTTCACGTT 216077 Query 42138 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | | ||||| |||| ||||| || | |||||||| || || || | || || Sbjct 216078 GTCAATAGTGTCAGAGCTC---TCCACTTCCAAAGTGATGGTCTTTCCTGTCAAAGTTTT 216134 Query 42194 TACAAAGATTTGCAT 42208 ||||| || ||||| Sbjct 216135 GACAAATATCTGCAT 216149 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||||||||||||||||||||| ||||| || | || || |||||||| ||||| || Sbjct 216642 CTCCTTTTGAATATTGTAATCAGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAA 216701 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || || | ||||||||| | || | | ||||||| | ||| |||| | || | Sbjct 216702 GATCAGCCTCTGCTGGTCTGGGGGAATCCCTTCCTTGT-CTTGAATTTTCGCCTTCACGT 216760 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| ||| || || || | || ||||||||||| || || || | Sbjct 216761 TATCAATTGTGTCTGAACTC---TCGACCTCAAGAGTAATGGTTTTGCCGGTAAGAGTTT 216817 Query 42193 TTACAAAGATTTGCAT 42208 | ||||| || ||||| Sbjct 216818 TAACAAATATCTGCAT 216833 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| || |||||||| |||| ||| | || |||||| || || || |||||||| Sbjct 216150 ACCTCCCCTCAAACGCAAAACCAGATGAAGCGTCGACTCCTTCTGTATGTTATAATCAGC 216209 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || |||| | || || || ||||| || || ||||| | |||||||||||| | || Sbjct 216210 AAGTGTCCTTCCATCTTCAAGTTGCTTCCCTGCAAATATCAATCGCTGCTGGTCTGGGGG 216269 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGA---TT 42156 | | ||||||| | ||| |||| | || | | | | ||||| ||| | Sbjct 216270 AATCCCTTCCTTGT-CTTGAATTTTGGCCTTCACGTTATCAATTGTGTC---CGAACTCT 216325 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || | ||||| ||||| || || | ||||| || ||||||||||| Sbjct 216326 CAACCTCCAAGGTGATAGTTTTTCCTGTCAAAGTCTTGACGAAGATTTGCAT 216377 >seq368178 Length=4824 Score = 102 bits (112), Expect = 9e-17 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || |||||||| || || || || |||| || |||||||| || ||||| Sbjct 3408 CTCCTTCTGGATGTTGTAATCGGCTAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 3467 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||| | || | | |||||||| ||| || ||| | | Sbjct 3468 AATCAGACGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGGATCTTGGCTTTCACATT 3527 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||| ||||| || || | ||||| ||||| |||||||| || || || Sbjct 3528 GTCGATTGTGTCGGAAGATTCAACCTCAAGGGTGATTGTTTTACCCGTTAGGGTTTTGAC 3587 Query 42197 AAAGATTTGCATTTTC 42212 ||||| ||||| ||| Sbjct 3588 GAAGATCTGCATCTTC 3603 >seq24017 Length=104150 Score = 102 bits (112), Expect = 9e-17 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| || ||||| | ||||||||||| ||| ||| || || |||||||||||||| Sbjct 2165 CCTCCCCTCAAACGGAGAACCAAATGCAACGTGGACTCTTTCTGGATATTGTAATCAGCA 2224 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || |||| | | || || |||||||||||||| || || | ||||||||| || | ||| Sbjct 2225 AGGGTCCTCCCATCCTCAAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATCTGGTGG 2283 Score = 102 bits (112), Expect = 9e-17 Identities = 142/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 |||||||| || ||||| || || ||||| || | || ||||||||||| ||||| || Sbjct 2885 TCCTTTTGGATGTTGTAGTCGGCAAGAGTGCGGCCATCCTCTAGCTGCTTTCCAGCAAAG 2944 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 || | | |||||| |||| || | | ||||||||| ||| | || | |||| | Sbjct 2945 ATCAACCTCTGCTGATCGGGAGGGATTCCTTCCTTGTCC-TGAATCTTAGCCTTGACATT 3003 Query 42137 CGCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | |||||| ||| || || |||| || |||||||| || || |||||||| Sbjct 3004 ATCAATAGTGTCGGAACTC---TCAACCTCGAGAGTAATGGTTTTTCCGGTAAGCGTCTT 3060 Query 42194 TACAAAGATTTGCAT 42208 ||||||||||||||| Sbjct 3061 TACAAAGATTTGCAT 3075 Score = 102 bits (112), Expect = 9e-17 Identities = 142/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 |||||||| || ||||| || || ||||| || | || ||||||||||| ||||| || Sbjct 5808 TCCTTTTGGATGTTGTAGTCGGCAAGAGTGCGGCCATCCTCTAGCTGCTTTCCAGCAAAG 5867 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 || | | |||||| |||| || | | ||||||||| ||| | || | |||| | Sbjct 5868 ATCAACCTCTGCTGATCGGGAGGGATTCCTTCCTTGTCC-TGAATCTTAGCCTTGACATT 5926 Query 42137 CGCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | |||||| ||| || || |||| || |||||||| || || |||||||| Sbjct 5927 ATCAATAGTGTCGGAACTC---TCAACCTCGAGAGTAATGGTTTTTCCGGTAAGCGTCTT 5983 Query 42194 TACAAAGATTTGCAT 42208 ||||||||||||||| Sbjct 5984 TACAAAGATTTGCAT 5998 >seq19970 Length=23264 Score = 102 bits (112), Expect = 9e-17 Identities = 158/222 (71%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 41989 TTAA-ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTC 42047 |||| ||||||||| | ||| | ||| ||||| ||||||||||||||||| || || Sbjct 94 TTAAGACGCAACACAAGATGGAGAGTGGATTCCTTCTGAATATTGTAATCAGCAAGTGTT 153 Query 42048 CGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTC 42107 || | || || || || || ||||| || || | | || || || | || | | Sbjct 154 CGACCATCTTCAAGTTGTTTTCCAGCAAAAATTAACCTTTGTTGATCTGGAGGAATTCCT 213 Query 42108 TCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGAC 42166 ||||||| | ||| ||||||||| | | | | | | |||||| || || |||| Sbjct 214 TCCTTGT-CTTGAATTTTTGTTTTAACATTGTCAATAGTGTCGGAGTTCTCAACCTCGAG 272 Query 42167 CGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || |||||||| || ||||| ||||| |||||||||||||| Sbjct 273 TGTAATGGTTTTTCCAGTTAGTGTCTTAACAAAGATTTGCAT 314 >seq131271 Length=1147 Score = 100 bits (110), Expect = 3e-16 Identities = 162/229 (71%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| | | ||||||||| | ||| | ||| ||||| ||||||||||||||||| Sbjct 331 ACCTCCGCGAAGACGCAACACAAGATGGAGAGTGGATTCCTTCTGAATATTGTAATCAGC 272 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || || || || || ||||| || || | | || || || | || Sbjct 271 AAGTGTTCGACCATCTTCAAGTTGTTTTCCAGCAAAAATTAACCTTTGTTGATCTGGAGG 212 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159 | || ||||||| | ||| ||||||||| | | | | | | |||||| || | Sbjct 211 AATCCT-TCCTTGT-CTTGAATTTTTGTTTTAACATTGTCAATAGTGTCGGAGTTCTCAA 154 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | |||| || ||||| || || ||||| ||||| |||||||||||||| Sbjct 153 CCTCGAGTGTAATGGTCTTTCCAGTTAGTGTCTTAACAAAGATTTGCAT 105 >seq22395 Length=162664 Score = 96.9 bits (106), Expect = 4e-15 Identities = 142/197 (72%), Gaps = 8/197 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| |||||||||||||| || || |||| | || || | |||||| ||||| || Sbjct 26669 CTCCTTCTGAATATTGTAATCTGCAAGTGTCCTACCATCCTCCAACTGCTTCCCAGCAAA 26728 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || || | ||| ||||| | ||| | | |||||| ||| ||| | || | || | Sbjct 26729 GATAAGCCTCTGTTGGTCTGGTGGAATACCCTCCTTATCC-TGAATCTTCGCCTTCACAT 26787 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | |||||| |||| || || || | ||||||||||| ||||||| || | Sbjct 26788 TGTCAATCGTGTCTGAGCTC---TCAACTTCTAATGTGATGGTTTTTCCCGTTAAGGTTT 26844 Query 42193 TTACAAAGATTTGCATT 42209 | ||||||||||||||| Sbjct 26845 TAACAAAGATTTGCATT 26861 Score = 89.7 bits (98), Expect = 6e-13 Identities = 139/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || || |||||||||||||| | | || |||| ||||| ||||| || Sbjct 110516 TCCTTCTGGATGTTATAATCAGCCAGAGTTCTTCCATCTTCTAATTGCTTCCCAGCAAAA 110575 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | | |||||| || | ||| | | |||||||| | ||| |||||| | | | | Sbjct 110576 ATCAACCTCTGCTGATCAGGTGGGATACCCTCCTTGT-CTTGAATTTTTGCCTTAACATT 110634 Query 42138 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | | ||| || |||| || || || | |||||| ||||| || |||| ||||| Sbjct 110635 GTCTATCGTATCCGAGCTC---TCAACTTCCAACGTGATTGTTTTTCCAGTTAAGGTCTT 110691 Query 42194 TACAAAGATTTGCAT 42208 ||||| |||||||| Sbjct 110692 AACAAAAATTTGCAT 110706 Score = 86.0 bits (94), Expect = 7e-12 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||||||||| ||||| || ||||| ||| | || || | ||||| || || || Sbjct 27581 CTCCTTTTGAATATTATAATCTGCGAGAGTACGCCCATCTTCCAATTGCTTCCCTGCAAA 27640 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||| || | |||||| || | ||| | | ||| |||| | || |||| | | | | | Sbjct 27641 TATCAGCCTCTGCTGATCCGGTGGGATACCCTCTTTGT-CTTGTATTTTCGCCTTAACAT 27699 Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| ||| ||| || || | ||||||||||| || |||| || | Sbjct 27700 TGTCTATGGTGTCCGAGCT---TTCAACTTCCAGTGTGATGGTTTTTCCAGTTAAGGTTT 27756 Query 42193 TTACAAAGATTTGCAT 42208 | |||||||| ||||| Sbjct 27757 TAACAAAGATCTGCAT 27772 Score = 86.0 bits (94), Expect = 7e-12 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||||| ||||||||| || ||||| ||| | || || ||||| || || || || Sbjct 110971 CTCCTTTTGAAAATTGTAATCTGCGAGAGTACGCCCATCCTCGAGCTGTTTTCCTGCAAA 111030 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | || ||||| || | ||| | | || |||||| ||| |||| | || | | | Sbjct 111031 GATCAAACGTTGCTGATCTGGTGGAATACCTTCTTTGTCC-TGAATTTTGGCTTTAACAT 111089 Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | |||||| ||| || || |||| || || || ||||| || || |||| Sbjct 111090 TGTCGATCGTGTCTGAACTC---TCAACTTCGAGAGTTATAGTCTTGCCAGTCAGGGTCT 111146 Query 42193 TTACAAAGATTTGCAT 42208 | ||||| || ||||| Sbjct 111147 TCACAAATATCTGCAT 111162 >seq57534 Length=59227 Score = 93.3 bits (102), Expect = 5e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| || | | || ||||||||||| ||| |||||| ||||| ||||| || || Sbjct 10067 CCTCCCCTCAGCCTCAGCACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGCA 10126 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || | |||||| || || || || || | ||||||||| | || Sbjct 10127 AGGGTGCGACCATCTTCCAACTGCTTTCCTGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 10186 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 42160 | | |||||||||| ||| || |||| ||| | | | ||||| ||| || Sbjct 10187 ATCCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATAGTGTCAGAACTTTCAAC 10245 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||| ||||| || || || || || ||||| ||||| Sbjct 10246 CTCCAGTGTGATGGTCTTGCCGGTGAGGGTTTTGACGAAGATCTGCAT 10293 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/197 (71%), Gaps = 12/197 (6%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||||||||| || || || | || || |||||||| |||||||| Sbjct 10331 TCCTTCTGGATGTTGTAATCAGCTAGGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAG 10390 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG---TTTGAGC 42134 || | | ||||||||| | || | || |||||| ||| ||| |||| | || | Sbjct 10391 ATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTATCC-TGAATTTTGGCCTTTACATT 10449 Query 42135 GTCGCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTC 42191 |||| | |||||| ||| || || || | |||||||| ||||| || || || Sbjct 10450 GTCG--ATGGTGTCGGAACTC---TCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTT 10504 Query 42192 TTTACAAAGATTTGCAT 42208 || || ||||| ||||| Sbjct 10505 TTGACGAAGATCTGCAT 10521 >seq914224 Length=857 Score = 91.5 bits (100), Expect = 2e-13 Identities = 138/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||| |||||||| ||||| ||||| || | || |||| |||||| ||||| || Sbjct 242 CTCCTTTTGGATATTGTAGTCAGCAAGAGTTCGGCCATCCTCTAACTGCTTTCCAGCAAA 183 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | | ||||| || | || | | ||||| || ||| ||| || | | Sbjct 182 GATCAACCTTTGCTGATCTGGAGGAATTCCTTCCTTATCTTGGATCTTTGCCTTAACATT 123 Query 42137 CGCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | |||||| ||| || || |||| |||||||||||||| || || ||||| Sbjct 122 GTCGATAGTGTCGGAACTC---TCAACCTCGAGGGTGATGGTTTTGCCAGTGAGGGTCTT 66 Query 42194 TACAAAGATTTGCAT 42208 |||||||||||||| Sbjct 65 AACAAAGATTTGCAT 51 >seq39326 Length=18362 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||||||||| || || || | || || | |||||||||||| || Sbjct 8262 TCCTTCTGGATGTTGTAATCAGCTAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAG 8321 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | | |||||| || | ||| | | ||||||||| ||| | || | | | ||| Sbjct 8322 ATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTGTCC-TGAATCTTCGCCTTAACGTT 8380 Query 42138 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | |||||| ||| || || | ||||| ||||| || ||||| || || || Sbjct 8381 GTCAATTGTGTCGGAGCTTTCGACTTCAAGGGTGATTGTTTTCCCGGTTAGGGTTTTGAC 8440 Query 42197 AAAGATTTGCAT 42208 |||||||||||| Sbjct 8441 AAAGATTTGCAT 8452 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||||||||| || || || | || || | |||||||||||| || Sbjct 6665 CTCCTTCTGGATGTTGTAATCAGCTAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAA 6724 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || | | |||||| || | ||| | | ||||||||| ||| | || | |||| Sbjct 6725 GATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTGTCC-TGAATCTTAGCCTTGACAT 6783 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| ||| ||| || || | ||||| ||||| || ||||| || | Sbjct 6784 TGTCGATAGTGTCAGAGCT---TTCAACTTCAAGGGTGATTGTTTTCCCGGTTAGGGTTT 6840 Query 42193 TTACAAAGATTTGCAT 42208 | || ||||||||||| Sbjct 6841 TGACGAAGATTTGCAT 6856 >seq10275 Length=89473 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||||||||| || || || | || || | |||||||||||| || Sbjct 10706 TCCTTCTGGATGTTGTAATCAGCTAGGGTTCGGCCATCTTCCAACTGCTTACCAGCAAAG 10765 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | | ||| || || | ||| | | ||||||||| ||| | || | | | ||| Sbjct 10766 ATCAACCTCTGTTGATCTGGTGGGATTCCTTCCTTGTCC-TGAATCTTCGCCTTAACGTT 10824 Query 42138 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | |||||| ||| || || | ||||| ||||| || ||||| || || || Sbjct 10825 GTCAATTGTGTCGGAGCTTTCGACTTCAAGGGTGATTGTTTTCCCGGTTAGGGTTTTGAC 10884 Query 42197 AAAGATTTGCAT 42208 |||||||||||| Sbjct 10885 AAAGATTTGCAT 10896 Score = 86.0 bits (94), Expect = 7e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||||||||| || || || |||| || || ||||| || || || Sbjct 10477 CTCCTTCTGGATGTTGTAATCAGCGAGGGTTCGGCCGTCTTCAAGTTGCTTTCCGGCAAA 10536 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || | |||||||||| ||| | | ||| || ||| |||||| || | | Sbjct 10537 GATCAGCCTTTGCTGGTCGGGTGGGATTCCCTCTTTATCCTGGATTTTCGCCTTAACGTT 10596 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||| ||| || || | ||||| ||||| || ||||| || || || Sbjct 10597 ATCAATAGTGTCGGAGCTTTCAACTTCAAGGGTGATTGTTTTCCCGGTTAGGGTTTTGAC 10656 Query 42197 AAAGATTTGCAT 42208 ||||||||||| Sbjct 10657 GAAGATTTGCAT 10668 >seq1350 Length=82824 Score = 87.8 bits (96), Expect = 2e-12 Identities = 112/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| || |||||||| |||||||| | || |||||| || || || || || || Sbjct 7997 CCTCCCCTCAAACGCAAGACCAAATGGAGAGTCGACTCCTTCTGGATGTTATAGTCCGCA 8056 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||||| |||| || || || |||||||| || || | ||||||||||| | || Sbjct 8057 AGAGTCCTGCCGTCCTCCAGTTGTTTACCAGCAAAGATCAAACGCTGCTGGTCTGGCGGG 8116 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGA 42132 | | |||||||| | ||| | |||| ||||| Sbjct 8117 ATACCCTCCTTGT-CTTGAATCTTTGCTTTGA 8147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 536900619732880