Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20otophora_20[genbank_20GCA_5F000715115.1_202014-06-05]
929,607 sequences; 2,689,351,490 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq254151 84.2 3e-11
>seq254151
Length=6888
Score = 84.2 bits (92), Expect = 3e-11
Identities = 243/367 (66%), Gaps = 8/367 (2%)
Strand=Plus/Plus
Query 12704 ATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGC 12763
|||||| || ||||| | || | || |||||| ||||| || || || |||||
Sbjct 4555 ATCAAATCGCCCTGGTCTCAGCAAAGCAGAGTCAAGAATATCTGCACGATTGGTTGCCGC 4614
Query 12764 GATGACAACGATGCCCGTCTCGTTATCGAAGCCATCCATCTCAGTCAAGAGTTGATTGAT 12823
| || | || || || | ||||| || ||||| || ||||| ||||| || |
Sbjct 4615 AACAACTATTATACCAGTATTTCCTTCGAAACCGTCCATTTCTGTCAATAGTTGGTTCAG 4674
Query 12824 GGTTTGTTCACGTTCATCATTCGCGGGCATACCA--CCCGCACTGCGTTGCTTACCGACG 12881
||| ||||| | |||||||||| | | | | | || | | | |||| || ||
Sbjct 4675 GGTCTGTTCCCTTTCATCATTCCCT--CCTCCAATTCCAGTCCCTCTTTGCCGCCCAACA 4732
Query 12882 GCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAA-CTTCAAAGAT 12940
|| |||||||| |||| || || || || || |||||| ||| ||| ||| |
Sbjct 4733 GCATCAATTTCATCAACAAATACAATGCAGGGAGCATTTTCCTTGGCCTTCTTGAAA-AG 4791
Query 12941 ATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGAACA 13000
||| || |||| ||| || ||||| ||||||||||| ||||| | | | ||| |
Sbjct 4792 ATCACGGACTCGAGAGGCTCCTACACCAACAAACATCTCAACAAATTCTGAACCTGAA-A 4850
Query 13001 TTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCG 13059
||| || || || || | |||||| || || || || || ||||||||||| |
Sbjct 4851 TTGAGAAAAATGGAACACCCGCTTCACCAGCAATTGCCTTTGCTAGCAGGGTCTTCCCAG 4910
Query 13060 TCCCTGG 13066
| || ||
Sbjct 4911 TACCAGG 4917
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 606378192654120
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |