Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20otophora_20[genbank_20GCA_5F000715115.1_202014-06-05] 929,607 sequences; 2,689,351,490 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq508016 95.1 1e-14 >seq508016 Length=803 Score = 95.1 bits (104), Expect = 1e-14 Identities = 336/522 (64%), Gaps = 11/522 (2%) Strand=Plus/Minus Query 37212 ATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATT 37271 ||||| || || || ||||||||||| |||||||| || | ||||| | ||| ||||| Sbjct 794 ATCAACTCGTTCGAGAAGGTTAATCCAGGCATTAACCCCCGCTTTTTTAACCAGAATATA 735 Query 37272 GCTGCAAAAGAT-CCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGT 37330 || || ||| | |||||||| ||||||||||| || |||||||| || | ||| Sbjct 734 GCA-CAGAAGCTTCCAGAAAAAAAAATACCTTCCACACAAGCAAATGCAACCAAACGCTC 676 Query 37331 ACCGAAAGTT---GAACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTT 37387 | || ||| |||| | ||||| | | ||| | ||||| | Sbjct 675 CGCAAATGTTTCGGAAC------CGTCGATCCAACGTAGGGCCCACTTCGCCTTCTTCTC 622 Query 37388 AACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTAT 37447 |||||| || || |||| ||| || | | ||||||||||| || | || Sbjct 621 AACACAGGGGATAGTCTCAACTGCGCGGAACAATCTGCTTTTTTCTTCAGAGTCCTTGAT 562 Query 37448 ATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAA 37507 || | || | || | ||| ||||| || || || || |||||||| || || || || Sbjct 561 GTACGACTCTAGAAGCAGACTGTACATCTCGGAATGGATGTTTTCAATCGCGATTTGGAA 502 Query 37508 ACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTT 37567 || || ||| | || || | | ||| || || || | ||||| |||| ||| Sbjct 501 GCCGTAGAAAGCACGCGCCTCCGCAACTTGGACTTCTTTCATGAACCTTCCGGCTAGGTT 442 Query 37568 TTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCT 37627 ||| ||| || || || || || || || ||||| |||| | || ||||| || Sbjct 441 TTCTAAAACGATGCCGTCTGAGGCGGCGAAAAAGGCAAGGACATGAGTGATGAAATGCCT 382 Query 37628 TTCATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAAC 37687 ||| | | || ||| ||| | | ||||| |||||||| ||||| ||| | Sbjct 381 TTCGCCGGGAGTTAGGGTTTCCCAGTGACGGGTATCTGAAGATAAATCGACTTCCTCAGC 322 Query 37688 GGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAAT 37729 ||||| ||| || || || ||| ||||| |||||| Sbjct 321 AGTCCAGAAAGAGGCTAAGGCTTTTTTGTACATTTCCCAAAT 280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 585434026956280