Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20otophora_20[genbank_20GCA_5F000715115.1_202014-06-05] 929,607 sequences; 2,689,351,490 total letters Query= NC_018283.1 Length=58065 Score E Sequences producing significant alignments: (Bits) Value seq464964 123 9e-24 >seq464964 Length=1981 Score = 123 bits (136), Expect = 9e-24 Identities = 192/271 (71%), Gaps = 5/271 (2%) Strand=Plus/Plus Query 45453 CTCGAAATACTCGCCGCAGTCGGGGCACGGCCAGTAGCGACGGCGACGGTCGCCTCGGTT 45512 |||||| || ||||| |||||||| ||||||| | || || ||||| || || || Sbjct 1679 CTCGAAGTAACTTCCGCATTCGGGGCAAGGCCAGTGCCAGCGTCGGCGGTCCCCACGATT 1738 Query 45513 GTAGAGACCGAGAATGCCGGTCGCGGGCGGCGCTTCGTGCTTCGTCCTTGGGATGTGTTT 45572 |||||| | || |||||||||| ||| || || ||| ||| || | || Sbjct 1739 GTAGAGCGCCAGGATGCCGGTCGTGGGAGGGGCCATGTGGCCGGTCAC---GACTTTCTT 1795 Query 45573 GGGGTCGGTGATCGGCTTCGACGGCGAGGATTCGGCCAGGGTCATCGCGAACGAACCGAA 45632 | ||||||||| |||||| ||| || ||||||||||||||| || ||| | Sbjct 1796 GTAATCGGTGATCTCGCGCGACGGGCTGGACTCTGCCAGGGTCATCGCGTTTGACCCGTA 1855 Query 45633 CGTCGTGGTCCGCTTGCTGGCGAGGTCGAACGGCG-AGCCGTCGCCGCCAATGTCGTCGT 45691 || ||||| ||||| || |||||||| |||| ||| || ||| | ||||| || | Sbjct 1856 GGTGGTGGTGCGCTTCGAGGACAGGTCGAA-GGCGTTGCCCTCCCCGTCGATGTCATCCT 1914 Query 45692 CCATCCGGTCGTAGTCGGTGAGGGCAACGCG 45722 | || |||||||||||||||| || ||||| Sbjct 1915 CGATTCGGTCGTAGTCGGTGATCGCCACGCG 1945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 183636592395218