Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20otophora_20[genbank_20GCA_5F000715115.1_202014-06-05] 929,607 sequences; 2,689,351,490 total letters Query= NC_019524.1 Length=60364 Score E Sequences producing significant alignments: (Bits) Value seq464964 113 2e-20 >seq464964 Length=1981 Score = 113 bits (124), Expect = 2e-20 Identities = 191/272 (70%), Gaps = 21/272 (8%) Strand=Plus/Minus Query 11257 ATCACCGACTATGACCGAATCGACGACGACATCGGCGGTGACGGTAACGCATTCGACCTC 11316 ||||||||||| ||||||||||| || ||||||| ||| || || ||||| |||||||| Sbjct 1936 ATCACCGACTACGACCGAATCGAGGATGACATCGACGGGGAGGGCAACGCCTTCGACCTG 1877 Query 11317 GCATCAAAACGTACAACGACCTTCGGGTCGTTTGCCATGTGTGCGGCAGAATCCTCACCG 11376 | || || || || || |||| |||||| || ||| |||||| ||| ||| Sbjct 1876 TCCTCGAAGCGCACCACCACCTACGGGTCAAACGCGATGACCCTGGCAGAGTCCAGCCCG 1817 Query 11377 TCCCGC-------CCGATTA-AAGACCCGCAGTGGATTAGACGATCAGCTCACGAAGCCC 11428 || ||| ||||||| |||| ||| | || | || ||| |||| Sbjct 1816 TCGCGCGAGATCACCGATTACAAGA----AAGTCG------TGACCGGC-CACATGGCCC 1768 Query 11429 CGCCATGCGA-CGGCATCGTCGGGCTATACAACCGTGGCGACCGCAGACGTTGGAAGTGG 11487 | || ||| ||||||| | | ||| ||||| ||||| |||||| |||| ||| | ||| Sbjct 1767 CTCC-CACGACCGGCATCCTGGCGCTCTACAATCGTGGGGACCGCCGACGCTGGCACTGG 1709 Query 11488 CCTTGCCCGGATTGCGGCATGTATTTCGAAGG 11519 |||||||| || ||||| | || ||||| || Sbjct 1708 CCTTGCCCCGAATGCGGAAGTTACTTCGAGGG 1677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190912180068484