Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20otophora_20[genbank_20GCA_5F000715115.1_202014-06-05] 929,607 sequences; 2,689,351,490 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq22395 129 1e-24 seq19970 122 2e-22 seq10275 113 8e-20 seq131271 111 3e-19 seq1350 104 4e-17 seq39326 98.7 2e-15 seq20754 98.7 2e-15 seq712589 95.1 2e-14 seq531574 95.1 2e-14 seq921976 89.7 9e-13 seq24017 87.8 3e-12 >seq22395 Length=162664 Score = 129 bits (142), Expect = 1e-24 Identities = 172/238 (72%), Gaps = 1/238 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| || || | | |||| || | ||| | ||| || ||||||||||||| Sbjct 27543 ATTCCACCCCTTAGCCTGAGAACTAGGTGGAGAGTTGACTCCTTTTGAATATTATAATCT 27602 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || || | || |||||||| || || ||||| || | ||||| || || ||| Sbjct 27603 GCGAGAGTACGCCCATCTTCCAATTGCTTCCCTGCAAATATCAGCCTCTGCTGATCCGGT 27662 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || ||||| ||||||||||| || ||||| ||| || || || ||| Sbjct 27663 GGGATACCCTCTTTGTCTTGTATTTTCGCCTTAACATTGTCTATGGTGTCCGAGCTTTCA 27722 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT-TTTATTA 172076 ||||| || || |||||||| |||||||| ||||||| || |||||||| | ||||| Sbjct 27723 ACTTCCAGTGTGATGGTTTTTCCAGTTAAGGTTTTAACAAAGATCTGCATCTGTATTA 27780 Score = 120 bits (132), Expect = 5e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | ||| || | |||| || | || | ||| || ||||||||||||| Sbjct 110705 ATCCCACCACGAAGGCGGAGGACTAGGTGGAGTGTTGACTCCTTTTGAATATTATAATCT 110764 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || || | || |||||||| || || |||||||| | || |||||||| ||| Sbjct 110765 GCCAGAGTGCGCCCATCTTCCAATTGCTTCCCCGCAAAAATCAGCCTTTGTTGGTCCGGT 110824 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| ||||| || |||||| ||||| || || || Sbjct 110825 GGAATACCTTCCTTATCTTGAATTTTCGCCTTAACATTATCAATAGTGTCCGAGCTCTCA 110884 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| | ||||| ||||| || || || ||||||| || || |||||| Sbjct 110885 ACTTCCAATGTAATTGTTTTCCCGGTCAAGGTTTTAACAAAGATTTGCATT 110935 Score = 104 bits (114), Expect = 4e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || |||||||| | | || || | | || || ||||| || ||||||||||| || ||| Sbjct 110525 ATGTTATAATCAGCCAGAGTTCTTCCATCTTCTAATTGCTTCCCAGCAAAAATCAACCTC 110584 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || || |||||||| || || || || ||||| ||||| || ||||| ||| ||| Sbjct 110585 TGCTGATCAGGTGGGATACCCTCCTTGTCTTGAATTTTTGCCTTAACATTGTCTATCGTA 110644 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || || ||||| | || || ||||| |||||||| || |||| || || ||| Sbjct 110645 TCCGAGCTCTCAACTTCCAACGTGATTGTTTTTCCAGTTAAGGTCTTAACAAAAATTTGC 110704 Query 172068 AT 172069 || Sbjct 110705 AT 110706 Score = 100 bits (110), Expect = 5e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 ||||| || || | | || | ||| | ||||| ||| || |||||| ||||||| Sbjct 26634 CCACCCCTCAGCCTCAGCACAAGATGGAGAGTAGACTCCTTCTGAATATTGTAATCTGCA 26693 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | | | | || ||||| || || |||||||| || | ||||||||||| ||||| Sbjct 26694 AGTGTCCTACCATCCTCCAACTGCTTCCCAGCAAAGATAAGCCTCTGTTGGTCTGGTGGA 26753 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 || || || ||||| || || || || ||||| || || ||||| || ||| Sbjct 26754 ATACCCTCCTTATCCTGAATCTTCGCCTTCACATTGTCAATCGTGTCTGAGCTCTCAACT 26813 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 |||| || |||||||| || ||||| ||||||| || || |||||| Sbjct 26814 TCTAATGTGATGGTTTTTCCCGTTAAGGTTTTAACAAAGATTTGCATT 26861 Score = 100 bits (110), Expect = 5e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || |||||||| | | | || | | || || ||||| || ||||| ||||| | ||| Sbjct 27135 ATGTTATAATCAGCCAGTGTTCTTCCATCTTCTAATTGCTTCCCAGCGAAAATCAGCCTC 27194 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || ||||| || || || ||||| |||||||| ||||| || |||||| || || Sbjct 27195 TGCTGGTCTGGCGGGATACCTTCCTTATCTTGGATTTTTGCCTTAACATTATCAATTGTG 27254 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || || ||||| | ||||||||||| || ||||| ||||||| || || ||| Sbjct 27255 TCCGAGCTCTCAACTTCCAATGTAATGGTTTTCCCGGTTAAGGTTTTAACAAAGATTTGC 27314 Query 172068 ATT 172070 ||| Sbjct 27315 ATT 27317 Score = 96.9 bits (106), Expect = 6e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||||||||||| | || | | | || ||||||||||| || |||||||| | ||| Sbjct 110296 AATATTATAATCTGCGAGAGTCCTTCCATCTTCCAATTGTTTCCCTGCAAAAATCAGTCT 110355 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| ||||| ||||| || || || ||||| ||||| || || |||||| || || Sbjct 110356 CTGCTGGTCTGGTGGGATACCCTCCTTATCCTGTATCTTGGCCTTCACATTATCAATGGT 110415 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||| || || || || | || || || || || || || || || | || ||||| Sbjct 110416 ATCGGAACTCTCCACCTCCAACGTTATTGTCTTCCCCGTCAAAGTCTTCACAAAGATCTG 110475 Query 172067 CAT 172069 ||| Sbjct 110476 CAT 110478 Score = 93.3 bits (102), Expect = 8e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||| ||||| |||||||| || | ||||| ||||| || || || ||||||||| Sbjct 110096 TCCTCCAACTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCCGGCGGAATACCTTCTTTA 110155 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || ||||| || || ||||| || | ||||| || ||||| | || ||| Sbjct 110156 TCCTGTATCTTCGCCTTCACATTGTCAATCATGTCTGAGCTCTCAACTTCCAATGTGATG 110215 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| |||||||| || |||| || || |||||| Sbjct 110216 GTTTTGCCAGTTAAGGTCTTAACAAAGATTTGCATT 110251 >seq19970 Length=23264 Score = 122 bits (134), Expect = 2e-22 Identities = 159/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 171850 TAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATC 171909 |||| || || || | ||| | ||| | || || |||||| ||||| | | | || Sbjct 95 TAAGACGCAACACAAGATGGAGAGTGGATTCCTTCTGAATATTGTAATCAGCAAGTGTTC 154 Query 171910 GTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTT 171969 | | || || | |||||| |||||||||||||| || ||||| || || || ||||||| Sbjct 155 GACCATCTTCAAGTTGTTTTCCAGCAAAAATTAACCTTTGTTGATCTGGAGGAATTCCTT 214 Query 171970 CTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAG 172029 | || ||||| ||||| |||| ||||| ||||| || || || || || || | Sbjct 215 CCTTGTCTTGAATTTTTGTTTTAACATTGTCAATAGTGTCGGAGTTCTCAACCTCGAGTG 274 Query 172030 TAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||||||| ||||||| ||| |||| || || ||||| Sbjct 275 TAATGGTTTTTCCAGTTAGTGTCTTAACAAAGATTTGCAT 314 >seq10275 Length=89473 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | ||| || | || | || ||||| | ||| || || || ||||| Sbjct 10211 ATCCCACCGCGAAGACGAAGCACAAGGTGCAAAGTCGACTCCTTCTGGATGTTGTAATCA 10270 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | || | ||| | || ||||| ||||||||||||||||| || ||||| || || ||| Sbjct 10271 GCTAGGGTTCGGCCATCTTCCAACTGTTTACCAGCAAAAATCAACCTCTGCTGATCTGGT 10330 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| || || || || ||| || ||||| ||||| || || ||| Sbjct 10331 GGGATTCCTTCCTTGTCCTGAATCTTAGCCTTGACATTGTCGATAGTGTCAGAGCTTTCA 10390 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || || ||||| || |||| ||||| | || |||||||| Sbjct 10391 ACTTCAAGGGTGATTGTTTTCCCGGTTAGGGTTTTGACAAAGATCTGCAT 10440 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || || ||||| | || | ||| | || ||||| || ||||||||||| || || ||| Sbjct 10715 ATGTTGTAATCAGCTAGGGTTCGGCCATCTTCCAACTGCTTACCAGCAAAGATCAACCTC 10774 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 ||||| || ||||| |||||||| || || || || || || || || || || Sbjct 10775 TGTTGATCTGGTGGGATTCCTTCCTTGTCCTGAATCTTCGCCTTAACGTTGTCAATTGTG 10834 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || ||| ||||| || || || ||||| || |||| ||||| | || || ||| Sbjct 10835 TCGGAGCTTTCGACTTCAAGGGTGATTGTTTTCCCGGTTAGGGTTTTGACAAAGATTTGC 10894 Query 172068 AT 172069 || Sbjct 10895 AT 10896 Score = 86.0 bits (94), Expect = 1e-11 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 171913 CGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTT 171972 |||| || | || || || || || || || || || ||||| ||||| |||||||||| Sbjct 10968 CGTCTTCGAGCTGCTTTCCGGCGAAGATCAACCTTTGCTGGTCCGGTGGGATTCCTTCTT 11027 Query 171973 TATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAA 172032 | || || || ||| || || || ||||| || || ||| || || || || | Sbjct 11028 TGTCCTGAATCTTAGCCTTAACGTTGTCAATAGTGTCGGAGCTTTCAACCTCAAGGGTTA 11087 Query 172033 TGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||| || ||||||| ||||||| ||| |||||||| Sbjct 11088 TGGTCTTTCCAGTTAGGGTTTTAACGAAGATCTGCAT 11124 >seq131271 Length=1147 Score = 111 bits (122), Expect = 3e-19 Identities = 162/228 (71%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||| || | ||| || || || | ||| | ||| | || || |||||| ||||| | Sbjct 331 ACCTCCGCGAAGACGCAACACAAGATGGAGAGTGGATTCCTTCTGAATATTGTAATCAGC 272 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 | | ||| | || || | |||||| |||||||||||||| || ||||| || || || Sbjct 271 AAGTGTTCGACCATCTTCAAGTTGTTTTCCAGCAAAAATTAACCTTTGTTGATCTGGAGG 212 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 | |||||| || ||||| ||||| |||| ||||| ||||| || || || || Sbjct 211 -AATCCTTCCTTGTCTTGAATTTTTGTTTTAACATTGTCAATAGTGTCGGAGTTCTCAAC 153 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || |||||||| || ||||||| ||| |||| || || ||||| Sbjct 152 CTCGAGTGTAATGGTCTTTCCAGTTAGTGTCTTAACAAAGATTTGCAT 105 >seq1350 Length=82824 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||||||||| || | || | ||| | || | |||||| ||| || |||||| Sbjct 8222 ATGCCACCTCTAAGACGAAGAACAAGATGCAGGGTTGACTCTTTCTGAATGTTGTAATCT 8281 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | || | | | || || | ||| || || ||||| || | |||||| ||||| || Sbjct 8282 GCCAATGTCCTCCCATCCTCAAGTTGCTTCCCGGCAAAGATCAGTCTCTGCTGGTCCGGA 8341 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| || || |||||||| ||||||||||| ||| Sbjct 8342 GGAATACCTTCCTTGTCTTGAATCTTTGCCTTTACATTGTCAATAGTATCTGAACTTTCA 8401 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || ||||| || || || | ||| || | || |||||||| Sbjct 8402 ACTTCAAGGGTGATGGTCTTGCCGGTAAGTGTCTTGACAAAGATCTGCAT 8451 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | || || | || | ||| | |||| ||| || || || || || Sbjct 8678 ATACCACCACGGAGACGGAGGACAAGATGGAGGGTAGACTCCTTTTGGATGTTGTAGTCA 8737 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || ||| | || || | ||||| |||||||| || | ||||| || ||||| Sbjct 8738 GCAAGAGTTCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGCCTCTGCTGATCAGGA 8797 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| || ||| ||| ||||| || || || || || Sbjct 8798 GGAATGCCTTCCTTGTCTTGAATCTTAGCTTTGACATTGTCAATGGTGTCAGAACTCTCG 8857 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||||||||| || || || | ||| |||| || |||||||| Sbjct 8858 ACCTCAAGAGTAATGGTCTTTCCGGTGAGTGTCTTAACAAAGATCTGCAT 8907 Score = 84.2 bits (92), Expect = 4e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171866 ATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTG 171925 ||| | ||||| |||||| ||||| || |||| | | || | || || | || Sbjct 7792 ATGAAGAGTAGACTCTTTCTGGATATTGTAGTCTGCAAGCGTGCGACCATCCTCAAGCTG 7851 Query 171926 TTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTT 171985 ||||||||||| || | ||||| || || ||||| || ||||| ||||| ||||| || Sbjct 7852 CTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGAATGCCTTCCTTATCCTGTATCTT 7911 Query 171986 ATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGT 172045 || ||||| || |||||||| || ||||| | || || || || ||||| Sbjct 7912 TGCCTTCACATTGTCAATGGTATCTGAGCTCTCCACTTCCAAGGTGATTGTCTTCCCAGT 7971 Query 172046 TAATGTTTTAATGAATATCTGCAT 172069 ||||| || | || |||||||| Sbjct 7972 CAATGTCTTCACAAAGATCTGCAT 7995 >seq39326 Length=18362 Score = 98.7 bits (108), Expect = 2e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || || ||||| | || | ||| | || ||||| || ||||||||||| || || ||| Sbjct 6675 ATGTTGTAATCAGCTAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAGATCAACCTC 6734 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || || || ||||| |||||||| || || || || ||| || ||||| ||||| Sbjct 6735 TGCTGATCTGGTGGGATTCCTTCCTTGTCCTGAATCTTAGCCTTGACATTGTCGATAGTG 6794 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || ||| ||||| || || || ||||| || |||| ||||| | ||| || ||| Sbjct 6795 TCAGAGCTTTCAACTTCAAGGGTGATTGTTTTCCCGGTTAGGGTTTTGACGAAGATTTGC 6854 Query 172068 AT 172069 || Sbjct 6855 AT 6856 Score = 98.7 bits (108), Expect = 2e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || || ||||| | || | ||| | || ||||| || ||||||||||| || || ||| Sbjct 6903 ATGTTGTAATCAGCTAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAGATCAACCTC 6962 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || || || ||||| |||||||| || || || || ||| || ||||| ||||| Sbjct 6963 TGCTGATCTGGTGGGATTCCTTCCTTGTCCTGAATCTTAGCCTTGACATTGTCGATAGTG 7022 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || ||| ||||| || || || ||||| || |||| ||||| | ||| || ||| Sbjct 7023 TCAGAGCTTTCAACTTCAAGGGTGATTGTTTTCCCGGTTAGGGTTTTGACGAAGATTTGC 7082 Query 172068 AT 172069 || Sbjct 7083 AT 7084 Score = 98.7 bits (108), Expect = 2e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || || ||||| | || | ||| | || ||||| || ||||||||||| || || ||| Sbjct 7131 ATGTTGTAATCAGCTAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAGATCAACCTC 7190 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || || || ||||| |||||||| || || || || ||| || ||||| ||||| Sbjct 7191 TGCTGATCTGGTGGGATTCCTTCCTTGTCCTGAATCTTAGCCTTGACATTGTCGATAGTG 7250 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || ||| ||||| || || || ||||| || |||| ||||| | ||| || ||| Sbjct 7251 TCAGAGCTTTCAACTTCAAGGGTGATTGTTTTCCCGGTTAGGGTTTTGACGAAGATTTGC 7310 Query 172068 AT 172069 || Sbjct 7311 AT 7312 Score = 98.7 bits (108), Expect = 2e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || || ||||| | || | ||| | || ||||| || ||||||||||| || || ||| Sbjct 7359 ATGTTGTAATCAGCTAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAGATCAACCTC 7418 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || || || ||||| |||||||| || || || || ||| || ||||| ||||| Sbjct 7419 TGCTGATCTGGTGGGATTCCTTCCTTGTCCTGAATCTTAGCCTTGACATTGTCGATAGTG 7478 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || ||| ||||| || || || ||||| || |||| ||||| | ||| || ||| Sbjct 7479 TCAGAGCTTTCAACTTCAAGGGTGATTGTTTTCCCGGTTAGGGTTTTGACGAAGATTTGC 7538 Query 172068 AT 172069 || Sbjct 7539 AT 7540 Score = 98.7 bits (108), Expect = 2e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || || ||||| | || | ||| | || ||||| || ||||||||||| || || ||| Sbjct 7587 ATGTTGTAATCAGCTAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAGATCAACCTC 7646 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || || || ||||| |||||||| || || || || ||| || ||||| ||||| Sbjct 7647 TGCTGATCTGGTGGGATTCCTTCCTTGTCCTGAATCTTAGCCTTGACATTGTCGATAGTG 7706 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || ||| ||||| || || || ||||| || |||| ||||| | ||| || ||| Sbjct 7707 TCAGAGCTTTCAACTTCAAGGGTGATTGTTTTCCCGGTTAGGGTTTTGACGAAGATTTGC 7766 Query 172068 AT 172069 || Sbjct 7767 AT 7768 Score = 98.7 bits (108), Expect = 2e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || || ||||| | || | ||| | || ||||| || ||||||||||| || || ||| Sbjct 7815 ATGTTGTAATCAGCTAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAGATCAACCTC 7874 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || || || ||||| |||||||| || || || || ||| || ||||| ||||| Sbjct 7875 TGCTGATCTGGTGGGATTCCTTCCTTGTCCTGAATCTTAGCCTTGACATTGTCGATAGTG 7934 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || ||| ||||| || || || ||||| || |||| ||||| | ||| || ||| Sbjct 7935 TCAGAGCTTTCAACTTCAAGGGTGATTGTTTTCCCGGTTAGGGTTTTGACGAAGATTTGC 7994 Query 172068 AT 172069 || Sbjct 7995 AT 7996 Score = 98.7 bits (108), Expect = 2e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || || ||||| | || | ||| | || ||||| || ||||||||||| || || ||| Sbjct 8043 ATGTTGTAATCAGCTAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAGATCAACCTC 8102 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || || || ||||| |||||||| || || || || ||| || ||||| ||||| Sbjct 8103 TGCTGATCTGGTGGGATTCCTTCCTTGTCCTGAATCTTAGCCTTGACATTGTCGATAGTG 8162 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || ||| ||||| || || || ||||| || |||| ||||| | ||| || ||| Sbjct 8163 TCAGAGCTTTCAACTTCAAGGGTGATTGTTTTCCCGGTTAGGGTTTTGACGAAGATTTGC 8222 Query 172068 AT 172069 || Sbjct 8223 AT 8224 >seq20754 Length=265263 Score = 98.7 bits (108), Expect = 2e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 171873 GTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCA 171932 |||| ||| || |||||| ||||| | | || ||| | || || | || || ||| Sbjct 216637 GTAGACTCCTTTTGAATATTGTAATCAGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCA 216696 Query 171933 GCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTT 171992 ||||| || | ||||| ||||| || || || ||||| || ||||| ||||| || Sbjct 216697 GCAAAGATCAGCCTCTGCTGGTCTGGGGGAATCCCTTCCTTGTCTTGAATTTTCGCCTTC 216756 Query 171993 ACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTT 172052 || ||| || || ||||| || || || |||||||||||||| || || | ||| Sbjct 216757 ACGTTATCAATTGTGTCTGAACTCTCGACCTCAAGAGTAATGGTTTTGCCGGTAAGAGTT 216816 Query 172053 TTAATGAATATCTGCAT 172069 |||| ||||||||||| Sbjct 216817 TTAACAAATATCTGCAT 216833 Score = 95.1 bits (104), Expect = 2e-14 Identities = 116/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || |||| || ||||||||||| || || ||||| |||| ||||| || |||||||| Sbjct 160403 TCCTCCAGCTGCTTACCAGCAAACATGAACCTCTGCGGGTCTGGTGGGATCCCTTCTTTG 160462 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT-TCTACTTCTAGAGTAAT 172033 || | ||||| || |||||| |||||| || || | | || ||||||| ||| || Sbjct 160463 TCCTCAATTTTCGCCTTCACATTATCTATAGTGTC-GAAGCTCTCCACTTCTAAAGTTAT 160521 Query 172034 GGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||| || || || || || || | ||||||||||| Sbjct 160522 GGTCTTCCCTGTCAAAGTGTTGACAAATATCTGCAT 160557 Score = 95.1 bits (104), Expect = 2e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 171873 GTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCA 171932 |||| ||| || |||||| ||||| | | || ||| | || || | || || ||| Sbjct 216865 GTAGACTCCTTTTGAATATTGTAATCAGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCA 216924 Query 171933 GCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTT 171992 ||||| || | ||||| ||||| || || || ||||| || ||||| ||||| || Sbjct 216925 GCAAAGATCAGCCTCTGCTGGTCTGGGGGAATCCCTTCCTTGTCTTGAATTTTGGCCTTC 216984 Query 171993 ACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTT 172052 || ||| || || ||||| || || || |||||||||||||| ||||| | ||| Sbjct 216985 ACGTTATCAATTGTGTCTGAACTCTCAACCTCGAGAGTAATGGTTTTTCCAGTGAGTGTC 217044 Query 172053 TTAATGAATATCTGCAT 172069 || | || |||||||| Sbjct 217045 TTTACAAAGATCTGCAT 217061 Score = 91.5 bits (100), Expect = 3e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||| ||||||| | | || | || |||| || ||||||||||| || | || Sbjct 215967 AATATTGTAATCTGCAAGGGTGCGCCCATCCTCCAGCTGCTTACCAGCAAATATGAGCCT 216026 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| || || ||||| || ||||||||||| || ||||| || || || ||||| Sbjct 216027 CTGCTGATCTGGTGGGATCCCTTCTTTATCCTGAATTTTGGCCTTCACGTTGTCAATAGT 216086 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 || || || ||||| | ||| ||||| || || || || ||||| | |||||||| Sbjct 216087 GTCAGAGCTCTCCACTTCCAAAGTGATGGTCTTTCCTGTCAAAGTTTTGACAAATATCTG 216146 Query 172067 CAT 172069 ||| Sbjct 216147 CAT 216149 >seq712589 Length=252 Score = 95.1 bits (104), Expect = 2e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| || || || | || ||||| | |||| || || || || ||||| Sbjct 150 ATACCACCCCTCAGGCGCAGCACCAAATGGAGGGTAGATTCCTTCTGGATGTTGTAATCA 91 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | ||||| | | | || || | ||||| ||||||||||| || ||||| ||||||||| Sbjct 90 GCTAAAGTCCTTCCATCCTCGAGCTGTTTCCCAGCAAAAATCAACCTCTGCTGGTCAGGT 31 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTA 171986 || || ||||| |||||||| |||||| Sbjct 30 GGGATCCCTTCCTTATCTTGAATTTTA 4 >seq531574 Length=12906 Score = 95.1 bits (104), Expect = 2e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 171966 CCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCT 172025 ||||| || ||||||||||| ||| ||||| |||||||| ||||| ||||| Sbjct 10111 CCTTCCTTGTCTTGTATTTTGGCTTTAACATTGTCGATAGTATCACTGGATTCAACTTCG 10170 Query 172026 AGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||||| |||||||||||||| | ||||| | ||||||||||||||| Sbjct 10171 AGAGTTATGGTTTTACCAGTGAGAGTTTTCACGAATATCTGCATTTT 10217 >seq921976 Length=1177 Score = 89.7 bits (98), Expect = 9e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983 || ||||| || ||||| || | ||| ||||| ||||| || ||||| || || || || Sbjct 941 TGCTTACCTGCGAAAATCAACCGCTGCTGGTCCGGTGGAATGCCTTCCTTGTCCTGAATC 1000 Query 171984 TTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 172043 ||| || ||||| || ||||| || || ||||| |||| ||||| || || ||| Sbjct 1001 TTAGCCTTAACATTGTCAATGGTATCCGATGACTCTACCTCTAAGGTAATAGTCTTCCCA 1060 Query 172044 GTTAATGTTTTAATGAATATCTGCATTTT 172072 || | || || | |||||||||||| || Sbjct 1061 GTCAGGGTCTTCACGAATATCTGCATCTT 1089 >seq24017 Length=104150 Score = 87.8 bits (96), Expect = 3e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 171861 ACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCG-TCATC 171919 || ||||| || || | |||||| ||||| ||||| | || | || | | || || Sbjct 2183 ACCAAATGCAACGTGGACTCTTTCTGGATATTGTAATCAGC-AAGGGTCCTCCCATCCTC 2241 Query 171920 CAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTG 171979 | || ||||||||||| || |||| ||| || || ||||| || |||||||||||||| Sbjct 2242 AAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATCTGGTGGAATCCCTTCTTTATCTTG 2301 Query 171980 TATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTT 172039 || || ||||| ||| || ||||| || ||| || || | || || || || Sbjct 2302 GATCTTCGCCTTTACGTTATCAATTGTATCAGAACTTTCGACCTCCAAGGTGATCGTCTT 2361 Query 172040 ACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||| || | || |||||||| Sbjct 2362 CCCTGTCAATGTCTTCACAAAGATCTGCAT 2391 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || |||||||||| | | || | || |||| || |||||||||||||| || ||| Sbjct 1982 ATGTTATAATCTGCAAGGGTACGACCATCCTCCAGCTGCTTACCAGCAAAAATCAACCTC 2041 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || || || || || || || || || || || || || ||| |||||| |||||| Sbjct 2042 TGCTGATCTGGGGGAATACCCTCCTTGTCCTGAATCTTTGCTTTCACATTATCAATAGTA 2101 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || || || || | ||| || || || ||||||| || || | ||||||||| Sbjct 2102 TCAGAGCTCTCCACCTCCAAAGTGATAGTCTTCCCAGTTAGAGTCTTGACAAATATCTGC 2161 Query 172068 AT 172069 || Sbjct 2162 AT 2163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 894618240480600