Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20otophora_20[genbank_20GCA_5F000715115.1_202014-06-05]
929,607 sequences; 2,689,351,490 total letters
Query= NC_021779.1
Length=59746
Score E
Sequences producing significant alignments: (Bits) Value
seq464964 86.0 2e-12
>seq464964
Length=1981
Score = 86.0 bits (94), Expect = 2e-12
Identities = 172/246 (70%), Gaps = 17/246 (7%)
Strand=Plus/Minus
Query 11784 ATCACCGACTATGACCGTATCGACGACGACATCGGCGGCGACGGTAACGCCTTCGACCTC 11843
||||||||||| ||||| ||||| || ||||||| ||| || || ||||||||||||||
Sbjct 1936 ATCACCGACTACGACCGAATCGAGGATGACATCGACGGGGAGGGCAACGCCTTCGACCTG 1877
Query 11844 GCATCAAAACGTACGACGACCTTCGGGTCGTTTGCCATGTGTGCGGCCGAGTCCTCGCCA 11903
| || || || || || |||| |||||| || ||| ||| |||||| ||
Sbjct 1876 TCCTCGAAGCGCACCACCACCTACGGGTCAAACGCGATGACCCTGGCAGAGTCCAGCCCG 1817
Query 11904 TCACGTCCGATTAAAGACCCGA--ACTGGATTAAG-CGT-AC--GCCGCACGAAGCCCCG 11957
|| || ||| | |||| || || ||| ||| || ||| || | |||||
Sbjct 1816 TCGCGCGAGATCA-----CCGATTACAAGA--AAGTCGTGACCGGCCACATG--GCCCCT 1766
Query 11958 CCATGCGA-CGGGATTGTCGGGTTATACAACCGTGGCGACCGCCGACGCTGGAAATGGCC 12016
|| ||| ||| || | | | | ||||| ||||| ||||||||||||||| | |||||
Sbjct 1765 CC-CACGACCGGCATCCTGGCGCTCTACAATCGTGGGGACCGCCGACGCTGGCACTGGCC 1707
Query 12017 GTGTCC 12022
|| ||
Sbjct 1706 TTGCCC 1701
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 188956410959272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |