Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20otophora_20[genbank_20GCA_5F000715115.1_202014-06-05] 929,607 sequences; 2,689,351,490 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq314382 91.5 7e-14 >seq314382 Length=4464 Score = 91.5 bits (100), Expect = 7e-14 Identities = 155/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 65087 CGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTC 65146 || || ||||| ||||||||||| || | ||| | ||| || |||| | | | | Sbjct 1750 CGAGTGCCAAATTGACCATTTGGTTGCAAAAGATTTACATTATTGCTGCCAACATAGTCC 1809 Query 65147 TGAGCCATTCCGATAAT--TGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAAT 65204 || ||||| || || || |||||| | | |||| ||||| || ||||| |||| | Sbjct 1810 TGTGCCATGCCAATGATGGTGCTGC--TAAGACTCTGCTCACCATGGTGATAAGCTGAGT 1867 Query 65205 GTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAA 65264 | ||||||||||| ||| |||||| | ||||||| ||| | | || ||| | |||| Sbjct 1868 GCTCAGAGACATAACCAGAAAATTGGGAAACTTTTGCCTCCTTAATAAAGTTCCTCTTAA 1927 Query 65265 ATGCAGAATACAATATTTTCCGTAAACTAATTTTCAATCCATC 65307 ||||| | ||| || |||| | || |||||| ||||| Sbjct 1928 ATGCACAGAACAGAATCTTCCTTTGACCCGGTTTCAAACCATC 1970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 233009843333550