Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20otophora_20[genbank_20GCA_5F000715115.1_202014-06-05] 929,607 sequences; 2,689,351,490 total letters Query= NC_029106.1 Length=62220 Score E Sequences producing significant alignments: (Bits) Value seq464964 100 1e-16 >seq464964 Length=1981 Score = 100 bits (110), Expect = 1e-16 Identities = 184/266 (69%), Gaps = 9/266 (3%) Strand=Plus/Minus Query 11814 GGTAAGCCAATTGGTCGTGCTGTGCTGACCGACTACGACCGCATGGACGACGACATCAAC 11873 |||||||| || || || | | | | |||||||||||||| || || || |||||| || Sbjct 1960 GGTAAGCCTATCGGCCGCGTGGCGATCACCGACTACGACCGAATCGAGGATGACATCGAC 1901 Query 11874 GGCGACGGCAACCCGTTCGACTTGGCTGCAAAGCGGACCACCACGTTCGGCAGCTTTGCA 11933 || || |||||| | |||||| || | | ||||| |||||||| | ||| || Sbjct 1900 GGGGAGGGCAACGCCTTCGACCTGTCCTCGAAGCGCACCACCACCTACGGGTCAAACGCG 1841 Query 11934 ATGACGTTCGCGGAGTCGTCGCCGTCTCGACCCATTCTTGATCCGAAGTGGATGCGTTCG 11993 ||||| | || ||||| ||||| || || ||| || | | | ||| Sbjct 1840 ATGACCCTGGCAGAGTCCAGCCCGTCGCGCGAGATCACCGATTACAA--GAAAG---TCG 1786 Query 11994 T---CGGCGCACGAGGCGCCGCCAACCACTGGCATTCTCGCGCTCTATAACCGTGGGGAT 12050 | |||| ||| ||| || || || || ||||| || |||||||| || |||||||| Sbjct 1785 TGACCGGC-CACATGGCCCCTCCCACGACCGGCATCCTGGCGCTCTACAATCGTGGGGAC 1727 Query 12051 CGTCGCCGCTGGTATTGGCCCTGCCC 12076 || || |||||| | ||||| ||||| Sbjct 1726 CGCCGACGCTGGCACTGGCCTTGCCC 1701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 196785816745988