Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20sylvestris_20[refseq_20GCF_5F000393655.1_202013-05-16] 253,918 sequences; 2,221,987,173 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq8725 100 6e-16 seq246053 98.7 2e-15 seq242486 98.7 2e-15 seq235222 98.7 2e-15 seq219764 98.7 2e-15 seq191650 98.7 2e-15 seq187734 98.7 2e-15 seq185233 98.7 2e-15 seq184451 98.7 2e-15 seq183908 98.7 2e-15 seq175672 98.7 2e-15 seq117048 98.7 2e-15 seq41558 98.7 2e-15 seq36724 98.7 2e-15 seq223986 95.1 3e-14 seq188287 91.5 3e-13 seq186882 91.5 3e-13 seq235512 87.8 4e-12 seq118536 87.8 4e-12 seq7669 87.8 4e-12 >seq8725 Length=349618 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 301958 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 301899 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 301898 CCCCACGGTGGGC 301886 >seq246053 Length=63790 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 23791 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 23850 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 23851 CCCACGGTGGGC 23862 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 23963 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 24022 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 24023 CCCACGGTGGGC 24034 >seq242486 Length=192932 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 182472 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 182531 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 182532 CCCACGGTGGGC 182543 >seq235222 Length=31885 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 4738 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 4679 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 4678 CCCACGGTGGGC 4667 >seq219764 Length=40606 Score = 98.7 bits (108), Expect = 2e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 |||||||||||||||||| |||||||||| || || |||| || ||||||||| |||||| Sbjct 8304 TTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGTGTTCGA 8363 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 8364 GCCCCACGGTGGGC 8377 >seq191650 Length=43940 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 24240 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 24181 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 24180 CCCACGGTGGGC 24169 >seq187734 Length=51820 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 17590 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 17649 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 17650 CCCACGGTGGGC 17661 >seq185233 Length=25366 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 7330 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 7389 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 7390 CCCACGGTGGGC 7401 >seq184451 Length=13131 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 2466 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 2525 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2526 CCCACGGTGGGC 2537 >seq183908 Length=66567 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 51141 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 51200 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 51201 CCCACGGTGGGC 51212 >seq175672 Length=179029 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 29140 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 29199 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 29200 CCCACGGTGGGC 29211 >seq117048 Length=259399 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 61347 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 61406 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 61407 CCCACGGTGGGC 61418 >seq41558 Length=203238 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 97030 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 96971 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 96970 CCCACGGTGGGC 96959 >seq36724 Length=25774 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 10332 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 10273 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 10272 CCCACGGTGGGC 10261 >seq223986 Length=47896 Score = 95.1 bits (104), Expect = 3e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||| ||| Sbjct 41663 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCAAGC 41722 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 41723 CCCACGGTGGGC 41734 >seq188287 Length=118390 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| | |||||||| || || |||| || |||||||||||||||||| Sbjct 76912 GCCCGTCTAGCTCAGTTG-TAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 76854 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 76853 CCCACGGTGGGC 76842 >seq186882 Length=108716 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/74 (88%), Gaps = 2/74 (3%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGT--TCGA 165767 |||||||||||||||| |||||||||| || || |||| || |||||||||||| |||| Sbjct 94025 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCTCGA 93966 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 93965 GCCCCACGGTGGGC 93952 >seq235512 Length=13636 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||||||| |||||| ||| || || |||| || ||||||||||||| || Sbjct 12268 TGCCCGTCTAGCTCAGTTGGTAGACCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTTTAG 12209 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 12208 CCCCACGGTGGGC 12196 >seq118536 Length=58152 Score = 87.8 bits (96), Expect = 4e-12 Identities = 168/248 (68%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 230390 TTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTA 230449 || |||| || || || | |||| |||||| | ||||| || | || ||| || Sbjct 25492 TTGCAGATGCTGTGGAGATAGAAAGGGAGTTTGTGTGTGATGCGCTGCCTTGTGCGCTGG 25551 Query 230450 TTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTG 230509 | || ||||| | || | ||| | | ||||| |||||||| || || | | || | Sbjct 25552 TGGGAATGAATGGAGATTTGATGAGCAAATACATTGAATTCGTGGCTGATAGATTGTTGG 25611 Query 230510 TTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCA 230569 ||| | ||||| || || ||||||| || |||| || |||| | |||||||| | Sbjct 25612 ATGCTTTGGGTTATGATAAGCTGTACAATGCTCAGAATCCGTTTGATTGGATGGAGCTGA 25671 Query 230570 TTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTG 230629 || | ||||||||||| || ||||| || ||| | || | || ||||||| | || Sbjct 25672 TTAGTTTACAAGGGAAGACTAATTTCTTTGAGAAGAGAGTTGGGGAGTATCAGAAGGCTT 25731 Query 230630 GTGTGATG 230637 ||| ||| Sbjct 25732 CTGTTATG 25739 >seq7669 Length=124452 Score = 87.8 bits (96), Expect = 4e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 ||||||||||||||| |||||||||| || || | || || |||||| |||||||||||| Sbjct 9424 CCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTAAACCTTGTGGTCATGGGTTCGAGCC 9483 Query 165771 CCACGATGGGC 165781 ||||| ||||| Sbjct 9484 CCACGGTGGGC 9494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1054382555396340