Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20sylvestris_20[refseq_20GCF_5F000393655.1_202013-05-16]
253,918 sequences; 2,221,987,173 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq178615 93.3 3e-14
seq238297 82.4 5e-11
>seq178615
Length=36453
Score = 93.3 bits (102), Expect = 3e-14
Identities = 96/126 (76%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 101752 AGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCC 101811
||| |||||||| | |||||| || || | || ||| ||||||||||||||||||||
Sbjct 8444 AGTAACATGAGCTACCATGCATGTCAACAAAGCATATGATGCAATGTTAAATGGCACTCC 8385
Query 101812 TAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATA 101871
|| |||||||| || || | ||||||| ||||||||| | || |||| |||||
Sbjct 8384 CAAACCCATATCTGCAGAGCGCTGATACATTTGACAGGATAACTCCCCATTGGCAACATA 8325
Query 101872 AAATTG 101877
||| ||
Sbjct 8324 AAACTG 8319
>seq238297
Length=50983
Score = 82.4 bits (90), Expect = 5e-11
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815
|||||||| |||||||| || | | | ||| |||||||||||||||||||| |
Sbjct 25146 ACATGAGCTATCATGCATGTCAGCAAGGCATAAGATGCAATGTTAAATGGCACTCCCAGA 25205
Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGA 101850
||||||||||| |||| ||||||| ||||||||
Sbjct 25206 CCCATATCAGCAGATCGCTGATACATCTGACAGGA 25240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 360133262779418
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |