Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20sylvestris_20[refseq_20GCF_5F000393655.1_202013-05-16] 253,918 sequences; 2,221,987,173 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq118536 156 4e-33 seq224189 140 3e-28 seq157592 125 7e-24 seq146937 114 1e-20 seq222647 109 6e-19 seq196472 109 6e-19 seq72314 109 6e-19 seq232054 105 7e-18 seq192764 105 7e-18 seq242921 100 3e-16 seq182284 98.7 1e-15 seq140002 86.0 6e-12 >seq118536 Length=58152 Score = 156 bits (172), Expect = 4e-33 Identities = 397/599 (66%), Gaps = 15/599 (3%) Strand=Plus/Plus Query 116603 CGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAG 116662 |||||| || ||||| || |||||||| | || ||| ||||||||||| ||| Sbjct 24852 CGGTTCTGTATGTTCCCAATTCAATACCCACAAATTTGGGAAATGTACAAAAAAGCCTTA 24911 Query 116663 GCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAGCGC 116722 || || |||||||| | || || || || | || || || | ||||||| | Sbjct 24912 GCCTCTTTCTGGACTGCTGAAGAAGTCGATTTATCTTCCGATACCCGTCACTGGGAAACC 24971 Query 116723 TTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGAC 116782 | | | | || | |||||||||| ||||| || ||||||||||||||| ||| Sbjct 24972 CTAACCCCCGGTGAAAGGCATTTCATCACTCACGTCCTTGCCTTTTTCGCCGCCTCAGAC 25031 Query 116783 GGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCG 116842 |||||||| || || || | || | ||| | || || || || ||||||||| Sbjct 25032 GGCATCGTTTTAGAAAACCTAGCCGGAAGGTTCATGAAAGAAGTCCAAGTTGCCGAGGCG 25091 Query 116843 CGGTGC-TTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGAC 116901 | |||| ||||||||||| || ||||| || || ||| | ||||| || ||||| Sbjct 25092 C-GTGCTTTCTACGGCTTCCAAATCGCGATTGAAAACATCCACTCCGAGATGTACAGTCT 25150 Query 116902 CCTCATCGACACGTACGT---GCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCAT 116958 || | || ||||| | | |||| || || || | | || || ||| | Sbjct 25151 GCTTCTAGAGTCGTACATCAAGGACTCT---GACGAAAAAAGCAGATTATTCCGCGCAGT 25207 Query 116959 CGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGG--C 117016 ||||| || || || || | ||||||| ||||||| || || ||||||| || | Sbjct 25208 TGAGACTATCCCCTGTGTTGAGAAGAAGGCGAAGTGGGCCCTACGTTGGATCGATGGTTC 25267 Query 117017 AGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTT 117076 || | | || | ||||| |||| ||||| || || || || | || || Sbjct 25268 CGAAA-----CATTTGCGGAGCGTTTGGTTGCCTTTGCTTGTGTGGAAGGTATTTTTTTC 25322 Query 117077 TCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACT 117136 || || || ||| || ||||| ||| | || || || || | ||||| || | ||| Sbjct 25323 TCTGGAAGCTTCTGTGCTATATTCTGGTTAAAAAAGCGGGGGTTAATGCCTGGATTAACT 25382 Query 117137 TTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCT 117195 ||| |||||| | || || |||||||| ||| |||| || || || || |||||||| Sbjct 25383 TTCTCGAACGAGTTAATTTCAAGGGACGAAGGTTTGCACTGTGATTTCGCTTGTTTGCT 25441 >seq224189 Length=50442 Score = 140 bits (154), Expect = 3e-28 Identities = 161/214 (75%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| ||||| || ||||| || ||||||||| | || |||||| || Sbjct 16630 AAGATGCAGATCTTCGTGAAAACCCTGACGGGTAAGACCATCACCCTTGAGGTCGAATCC 16571 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 |||||| | | |||| | |||| ||| || | ||||| || |||||||| |||| Sbjct 16570 TCCGACACAATCGACAACG-TGAAGGCAAAGATCCAGGACAAGGAAGGCATCCCACCGGA 16512 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || ||||| | ||| || |||||||| || || | || || || || || Sbjct 16511 CCAGCAGCGGCTCATTTTCGCCGGAAAACAGCTCGAGGATGGTCGAACTCTAGCTGATTA 16452 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||||||||||| |||| || ||| | ||| Sbjct 16451 CAACATCCAGAAGGAGTCCACTCTCCATTTGGTG 16418 >seq157592 Length=32097 Score = 125 bits (138), Expect = 7e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| ||||| |||||||| |||||| | || |||||| | Sbjct 24879 ATGCAGATCTTCGTCAAAACCCTCACCGGCAAAACAATCACCCTTGAGGTCGAAAGTTCT 24820 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| ||||||| || || ||||| || || | |||||| Sbjct 24819 GACACCATTGATAATGTCAAGGCCAAAATTCAGGATAAGGAGGGAATTCCACCAGACCAG 24760 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| ||| ||||| ||||| || || | || |||||| ||| |||||| Sbjct 24759 CAGAGGTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTCGCCGATTACAAC 24700 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || || || || || Sbjct 24699 ATCCAGAAGGAGTCTACCCTTCACCTTGT 24671 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| ||||| || || ||||||||| | || || ||| | Sbjct 24423 ATGCAGATTTTCGTCAAAACCCTCACTGGAAAGACCATCACCCTGGAGGTTGAAAGTTCT 24364 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || || | ||||| ||||| || ||| | ||||| Sbjct 24363 GACACTATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGGATTCCCCCAGACCA 24305 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || || || ||| |||| || | |||||||| |||||||| Sbjct 24304 GCAGAGGCTGATCTTTGCAGGAAAGCAGTTGGAAGATGGTCGCACCCTTGCGGACTACAA 24245 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||| ||||||||| |||| ||||| | ||| || | ||||||| || Sbjct 24244 CATTCAGAAGGAGTCCACCCTGCACTTGGTGCTGAGGCTGAGGGGAGG 24197 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| ||||| ||||| ||||||||| | || ||||| | Sbjct 24651 ATGCAGATCTTCGTCAAAACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGAGTTCT 24592 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| ||||||| || || |||||||| ||| | |||||| Sbjct 24591 GACACCATCGACAATGTCAAGGCCAAAATTCAGGATAAGGAGGGCATTCCCCCAGACCAG 24532 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | || | ||| ||||| ||||| || || | || ||||| || |||||| Sbjct 24531 CAGAGGTTGATATTCGCTGGCAAGCAGCTCGAGGATGGCCGTACCCTAGCTGATTACAAC 24472 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||| | || || || || || Sbjct 24471 ATCCAGAAGGAATCGACCCTTCACCTTGT 24443 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || || || || |||||||| |||| || || || Sbjct 25107 ATGCAGATCTTCGTGAAAACCCTAACCGGAAAGACCATCACTCTCGAGGTTGAGAGTTCC 25048 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | || | ||||| | ||||| || || || ||| | || || Sbjct 25047 GACACAATCGACAACG-TAAAAGCCAAAATCCAGGACAAGGAAGGAATTCCCCCAGATCA 24989 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||| | || |||| ||| ||||| ||||| || |||| || ||||| ||| ||||| Sbjct 24988 GCAAAGGCTTATCTTCGCCGGCAAGCAGCTTGAGGACGGACGTACCCTAGCCGATTACAA 24929 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| | || ||||| Sbjct 24928 CATCCAGAAGGAATCTACCCTGCA 24905 >seq146937 Length=209544 Score = 114 bits (126), Expect = 1e-20 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || || || ||||| |||||| | || || ||| | || Sbjct 82940 ATGCAGATCTTCGTGAAAACCCTAACCGGAAAAACAATCACCCTTGAGGTTGAAAGCTCC 82999 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || |||| |||||||| || ||||| ||||||| Sbjct 83000 GACACTATTGACAACGTT-AAGGCTAAGATTCAGGACAAAGAAGGAATCCCACCGGACCA 83058 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| ||| || || ||||| || |||| | ||||| ||||||||| Sbjct 83059 GCAGAGGTTGATCTTCGCCGGAAAGCAGCTCGAAGACGGTAGAACCCTAGCCGACTACAA 83118 Query 40869 CATCCAGAAGGA 40880 |||||||||||| Sbjct 83119 CATCCAGAAGGA 83130 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || ||||| || || || ||||| |||||| | || |||||| | || Sbjct 83168 ATGCAAATCTTTGTTAAAACCCTAACCGGGAAAACAATCACCCTTGAAGTCGAAAGCTCC 83227 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || |||| ||||| ||||| ||||| | ||||| Sbjct 83228 GACACTATCGACAACGTT-AAGGCTAAGATTCAGGACAAGGAGGGAATCCCACCAGACCA 83286 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||| | | || | ||| || || || || || |||| | ||||| || ||||| Sbjct 83287 GCAAAGGTTGATTTTCGCCGGAAAGCAACTCGAAGACGGCAGAACCCTAGCTGATTACAA 83346 Query 40869 CATCCAGAAGGA 40880 |||||||||||| Sbjct 83347 CATCCAGAAGGA 83358 Score = 82.4 bits (90), Expect = 8e-11 Identities = 147/212 (69%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || || || || | || || ||||||||||| | || || ||| | | Sbjct 83623 AATGCAGATTTTTGTCAAGACTTTGACCGGGAAAACCATCACTCTTGAGGTGGAAAGCTC 83682 Query 40749 CGACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | |||| | |||| || || | || || ||||| ||||| | || | Sbjct 83683 TGACACTATCGACAACG-TTAAGGCGAAGATCCAGGATAAGGAGGGTATCCCACCAGATC 83741 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 ||||| | || |||| || || || ||| |||| || | || ||||| || |||| Sbjct 83742 AGCAAAGGCTGATCTTTGCTGGTAAGCAGTTGGAAGATGGCCGAACCCTTGCTGATTACA 83801 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||||||||| | || |||| || ||| Sbjct 83802 ACATCCAGAAGGAGTCAACTTTGCACCTTGTG 83833 >seq222647 Length=37102 Score = 109 bits (120), Expect = 6e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| ||||| || ||||| ||||| |||||| | || || ||| | Sbjct 27685 AAGATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACAATCACCCTTGAGGTTGAATCT 27626 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 |||||| | | | | || | || || | || || || || || ||| | || Sbjct 27625 TCCGACACAATCGACAATGTGAAAGCCAAGATCCAAGATAAGGAAGGGATTCCCCCAGAT 27566 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || || || | ||| || || |||||||| ||||| || ||||| ||| ||| Sbjct 27565 CAGCAGCGTCTGATTTTCGCCGGAAAGCAGCTGGAAGACGACCGAACCCTAGCCGATTAC 27506 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||| ||||||||||| | || || ||||| ||| Sbjct 27505 AACCTCCAGAAGGAGTCGACTCTTCATCTCGTG 27473 >seq196472 Length=12654 Score = 109 bits (120), Expect = 6e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| ||||| ||||| | ||||| ||||||||||| | || || || | | Sbjct 8383 AATGCAAATCTTCGTTAAAACCTTAACGGGAAAAACCATCACATTGGAAGTTGAGAGCTC 8442 Query 40749 CGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | || || | | |||| || || | || ||||| || || || |||||| Sbjct 8443 AGACACGATTGACAATG-TGAAGGCGAAGATACAGGATAAAGAAGGTATACCACCGGACC 8501 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| | ||||||| || || || ||| |||| || | | ||||| || |||| Sbjct 8502 AGCAGAGGCTCATCTTTGCTGGAAAGCAGTTGGAGGATGGTAGGACCCTGGCTGATTACA 8561 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 | |||||||||||| | || || ||||| |||||| | ||||||| || Sbjct 8562 ATATCCAGAAGGAGTCTACACTCCATCTTGTGTTGAGGCTGAGGGGTGG 8610 >seq72314 Length=63918 Score = 109 bits (120), Expect = 6e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| ||||| ||||| | || || || |||||||| | || || || | | Sbjct 55685 AATGCAAATCTTCGTTAAAACTTTAACAGGAAAGACCATCACACTGGAAGTTGAGAGCTC 55744 Query 40749 CGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | || || | | |||| || || | || || ||||| || || |||||| Sbjct 55745 AGACACGATTGACAATG-TGAAGGCGAAGATACAGGATAAGGAGGGAATTCCACCGGACC 55803 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| | ||||||| || || |||||| |||| || | | || || |||||||| Sbjct 55804 AGCAGAGGCTCATCTTTGCTGGAAAACAGTTGGAGGATGGTAGGACACTGGCCGACTACA 55863 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 | |||||||||||| | ||||| ||||| ||| || | ||||||| || Sbjct 55864 ATATCCAGAAGGAGTCTACGCTCCATCTTGTGCTGAGGCTGAGGGGTGG 55912 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| | || || ||||||||||| | || || ||| | | Sbjct 54546 ATGCAGATCTTTGTTAAAACCTTAACTGGAAAAACCATCACACTGGAAGTTGAAAGCTCG 54605 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| ||||||| ||||| ||||| ||||| |||| ||| Sbjct 54606 GACACGATAGATAATGTTAAGGCGAAAATTCAAGACAAGGAGGGTATCCCGCCGGATCAG 54665 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || || | || || ||||| |||| || | ||| || ||| || || ||| Sbjct 54666 CAGAGGCTGATTTTTGCAGGGAAACAATTGGAAGATGGGCGTACTCTCGCAGATTATAAC 54725 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || || |||||| | || || || ||||| Sbjct 54726 ATTCAAAAGGAGTCAACCCTCCACCTAGT 54754 >seq232054 Length=109336 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||| ||||| |||||||| || || || ||||| || || || ||| | || || || | Sbjct 61994 AAAGATGCAGATATTCGTGAAGACCCTGACGGGTAAGACTATTACCTTAGAGGTAGAGTC 62053 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | | | | | |||| || |||| ||||| || ||||| || |||| Sbjct 62054 ATCGGACACCATTGACAATGTTAAGGCTAAGATTCAGGACAAGGAAGGCATTCCACCGGA 62113 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || | || | ||| || || ||||| || || | || || || ||||| Sbjct 62114 CCAGCAGCGGTTGATTTTCGCAGGTAAGCAGCTTGAGGATGGCCGAACACTAGCTGACTA 62173 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||||||| |||| || ||||| || Sbjct 62174 CAACATCCAGAAGGAGTCCACCCTCCATCTTGT 62206 >seq192764 Length=177479 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| ||||| || ||||| ||||| |||||| | || || ||| | Sbjct 143539 AAGATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACAATCACCCTTGAGGTTGAATCT 143480 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 |||||| | | | | || | || || | || || || || || ||| | || Sbjct 143479 TCCGACACAATCGACAATGTGAAAGCCAAGATCCAAGATAAGGAAGGGATTCCCCCAGAT 143420 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || || || | ||| || || ||||| || |||| || ||||| ||| ||| Sbjct 143419 CAGCAGCGTCTGATTTTCGCCGGAAAGCAGCTTGAAGACGGCCGAACCCTAGCCGATTAC 143360 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||||||| | || || ||||| ||| Sbjct 143359 AACATCCAGAAGGAGTCGACTCTTCATCTCGTG 143327 >seq242921 Length=127737 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || ||||| || ||||| ||||| |||||||| |||| || || || Sbjct 49563 ATGCAAATTTTTGTAAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTTGAGAGTTCC 49622 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || |||| || || || || ||||| | || ||| Sbjct 49623 GACACTATTGATAATGTCAAGGCTAAGATTCAGGATAAGGAAGGAATCCCTCCTGATCAG 49682 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| || || || ||||| || || | ||||| || ||||||||| Sbjct 49683 CAGAGGCTGATCTTTGCTGGAAAGCAGCTAGAGGATGGCCGCACTCTTGCTGACTACAAC 49742 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 || ||||||||| |||| || || || || | || ||| | || ||| Sbjct 49743 ATTCAGAAGGAGTCCACTCTTCACCTTGTCCTCCGTTTGCGCGGTGGC 49790 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || ||||| |||||||| || |||||||| || |||| || || || Sbjct 48879 ATGCAAATCTTTGTAAAGACGCTCACCGGAAAAACCATTACTCTCGAGGTTGAGAGTTCC 48938 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || || | ||||| || || ||||| | || ||| Sbjct 48939 GACACTATTGATAATGTCAAGGCTAAGATCCAGGACAAGGAAGGAATCCCTCCCGATCAG 48998 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| || || || ||||| || || | ||||| || |||||||||| Sbjct 48999 CAGAGGTTGATCTTTGCTGGAAAGCAGCTAGAGGATGGCCGCACTCTTGCCGACTACAAC 49058 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||| |||||| |||| || || || || Sbjct 49059 ATCCAAAAGGAGTCCACCCTTCACCTTGT 49087 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| | || || || ||||||||| | || || || | || Sbjct 49335 ATGCAGATTTTTGTGAAAACTTTGACTGGGAAGACCATCACCCTTGAGGTTGAGAGCTCC 49394 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| ||| || | ||||| || |||||||| | || ||| Sbjct 49395 GACACCATTGACAATGTCAAGGCAAAGATCCAGGACAAGGAAGGCATCCCTCCAGATCAG 49454 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | || | || || || ||||| || || | || || || ||||||||| Sbjct 49455 CAGAGGTTGATTTTTGCTGGTAAGCAGCTCGAGGATGGACGAACTCTTGCTGACTACAAC 49514 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| |||| || || || || Sbjct 49515 ATCCAGAAGGAGTCCACCCTCCACCTTGT 49543 >seq182284 Length=106024 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 40685 GAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAG 40744 |||| ||||| |||||||| || || || ||||| || || || ||| | || || || Sbjct 1434 GAAAGATGCAGATATTCGTGAAGACCCTGACGGGGAAGACTATTACCTTAGAGGTAGAGT 1375 Query 40745 CCACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 | |||| | | | | | |||| || |||| ||||| |||||||| || ||| Sbjct 1374 CATAGGACACCATTGACAATGTTAAGGCTAAGATTCAGGACAAGGAGGGCATTCCACCGG 1315 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 |||| || || | || | ||| || || ||||| || || | || || || |||| Sbjct 1314 ACCACCAGCGGTTGATTTTCGCAGGTAAGCAGCTTGAGGATGGCCGAACACTAGCTGACT 1255 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||||||||||| |||| || ||||| || Sbjct 1254 ACAGCATCCAGAAGGAGTCCACCCTCCATCTTGT 1221 >seq140002 Length=100703 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || |||||||| | || || || || ||||| |||| || || | | Sbjct 55333 ATGCAGATCTTTGTAAAAACTTTAACAGGGAAGACTATCACTCTCGAGGTTGAGAGCTCA 55392 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| ||| |||| ||||| || ||||| || |||| ||| Sbjct 55393 GACACAATTGATAATGTTAAGGCAAAGATTCAGGACAAGGAAGGCATTCCTCCGGATCAG 55452 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||| | | |||| || || || || || || || | || ||||| ||||||||| Sbjct 55453 CAAAGGTTGATCTTTGCTGGAAAGCAACTTGAGGATGGTCGTACCCTTGCTGACTACAAC 55512 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||| |||||| |||| || || || || | || ||| | || || Sbjct 55513 ATCCAAAAGGAGTCCACCCTCCACCTTGTTCTCCGTTTGCGTGGTGG 55559 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || || ||||| |||||| | || || || | Sbjct 56017 ATGCAGATCTTTGTGAAGACACTGACAGGGAAAACTATCACCCTTGAGGTTGAGAGTTCT 56076 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| ||||||| || || || || ||||| | |||||| Sbjct 56077 GACACCATCGATAATGTCAAGGCTAAAATTCAAGATAAGGAAGGGATCCCACCTGACCAG 56136 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | || | || || || ||||| || || | | | || || || |||||| Sbjct 56137 CAGAGGTTAATTTTTGCTGGGAAGCAGCTTGAGGATGGGAGGACTCTTGCTGATTACAAC 56196 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||| ||| |||| || ||| | ||| | |||||||| || || Sbjct 56197 ATCCAGAAAGAGTCCACACTCCATTTGGTGCTCCGCTTGAGAGGAGG 56243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 513583907139680