Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20sylvestris_20[refseq_20GCF_5F000393655.1_202013-05-16]
253,918 sequences; 2,221,987,173 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq179153 154 2e-32
seq196472 149 9e-31
seq140002 116 6e-21
seq72314 116 6e-21
seq188529 107 3e-18
seq198291 105 1e-17
seq184254 104 4e-17
seq242921 102 1e-16
seq146937 96.9 5e-15
seq157592 87.8 3e-12
seq182928 84.2 3e-11
>seq179153
Length=7583
Score = 154 bits (170), Expect = 2e-32
Identities = 180/237 (76%), Gaps = 6/237 (3%)
Strand=Plus/Minus
Query 124534 ATACA-ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA- 124591
||||| |||||||| ||| | |||||||| ||||| || || || || | ||| ||||
Sbjct 4761 ATACAGATGCAAATCTTTGTTAAGACACTCACAGGAAAGACCATTACACTCGAGGTTGAG 4702
Query 124592 AGCAAATGATACAATTTCTAATT--TAAAACAGAAAATTCAAGATAAAGAAGGTATACCA 124649
||| || || ||| ||| | ||||||| ||||||||||| || ||||| || ||
Sbjct 4701 AGCTCG-GACACCATTGATAAATGTTAAAACA-AAAATTCAAGACAAGGAAGGAATTCCT 4644
Query 124650 CCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAA 124709
|| |||||||||||| | |||||||| ||||||||| | |||||| |||||||| | |
Sbjct 4643 CCAGATCAACAAAGGTTAATTTTTGCTGGAAAACAACTCGAGGATGGTCGAACACTTGCT 4584
Query 124710 GATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766
||||| ||||| || || ||||| ||| | ||| | || || ||| | || || |||
Sbjct 4583 GATTACAATATCCAGAAGGAATCCACTCTCCATCTTGTGTTGCGTCTTCGCGGAGGT 4527
>seq196472
Length=12654
Score = 149 bits (164), Expect = 9e-31
Identities = 154/199 (77%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAA 124596
||||||||||||| | |||||| | || || ||||| || || | || |||| ||| |
Sbjct 7699 AATGCAAATATTTGTTAAGACATTGACTGGAAAAACAATCACATTGGAAGTTGAGAGC-A 7757
Query 124597 ATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656
|| || ||| ||| | ||| ||||||||||||||| |||||||| ||||| || |
Sbjct 7758 CGGACACTATTGATAACGTTAAAGCGAAAATTCAAGATAAGGAAGGTATTCCACCGGACC 7817
Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716
|||||||||| |||||||| || || ||||| || ||| | || || | | ||||||||
Sbjct 7818 AACAAAGGCTGATTTTTGCTGGGAAGCAATTGGAAGATGGGCGCACTCTGGCAGATTATA 7877
Query 124717 ATATTCAAAAAGAATCAAC 124735
|||||||||| || |||||
Sbjct 7878 ATATTCAAAAGGAGTCAAC 7896
Score = 141 bits (156), Expect = 1e-28
Identities = 176/237 (74%), Gaps = 3/237 (1%)
Strand=Plus/Plus
Query 124534 ATACA-ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA- 124591
||||| ||||| || ||| ||||||| || || ||||| ||||||||| | || ||||
Sbjct 7466 ATACAGATGCAGATCTTTGTAAAGACTCTTACTGGCAAGACTATAACTCTCGAAGTTGAG 7525
Query 124592 AGCAAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACC 124651
|| | || || || ||| | ||| |||||| || || ||||||||||| |||||
Sbjct 7526 AGTTCA-GACACGATCGACAATGTTAAATCGAAAATCCAGGACAAAGAAGGTATTCCACC 7584
Query 124652 TGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGA 124711
||||||||| | | || ||||||||||||||| | |||||| | || || | | ||
Sbjct 7585 AGATCAACAACGTTTGATCTTTGCAGGAAAACAACTCGAGGATGGACGGACTCTTGCGGA 7644
Query 124712 TTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||| || |||||||| || |||||| | || | ||| | ||| |||| ||||| ||
Sbjct 7645 TTACAACATTCAAAAGGAGTCAACTCTCCACCTTGTTCTTCGTCTACGTGGTGGAAT 7701
Score = 104 bits (114), Expect = 4e-17
Identities = 144/199 (72%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAA 124596
||||||||| ||| | ||||| |||| || ||||| || || | || |||| |||
Sbjct 7927 AATGCAAATTTTTGTTAAGACCTTAACTGGAAAAACAATCACGTTGGAAGTTGAGAGCTC 7986
Query 124597 ATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656
|| || || ||| | || ||||||||||| || || ||||| ||||| ||||
Sbjct 7987 G-GACACGATAGACAATGTTAAGGCTAAAATTCAAGACAAGGAGGGTATCCCACCGGATC 8045
Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716
| || ||||| |||||||| || || |||||||| ||| | ||||| | | |||||||
Sbjct 8046 AGCAGAGGCTGATTTTTGCTGGGAAGCAATTAGAAGATGGACGAACTCTGGCTGATTATA 8105
Query 124717 ATATTCAAAAAGAATCAAC 124735
| || || || ||||| ||
Sbjct 8106 ACATCCAGAAGGAATCCAC 8124
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| | ||||| | ||||| || || || || | ||| | ||
Sbjct 8156 ATGCAGATCTTTGTGAAGACTTTGACAGGGAAGACGATCACGTTGGAGGTGGAGAGTTCC 8215
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| ||| |||| | || || || || ||||| || ||||| ||||| |||||
Sbjct 8216 GATACCATTGATAATGTGAAGGCCAAGATACAGGATAAGGAGGGTATCCCACCAGATCAG 8275
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | ||||||||||| ||||||||||| ||| | |||| | | ||||||||
Sbjct 8276 CAAAGATTGATTTTTGCAGGGAAACAATTAGAAGATGGAAGAACTCTGGCTGATTATAAC 8335
Query 124719 ATTCAAAAAGAATCAAC 124735
|||||||| || || ||
Sbjct 8336 ATTCAAAAGGAGTCGAC 8352
Score = 95.1 bits (104), Expect = 2e-14
Identities = 142/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAA 124596
||||||||| || | || || |||| || ||||| || || | || |||| |||
Sbjct 8383 AATGCAAATCTTCGTTAAAACCTTAACGGGAAAAACCATCACATTGGAAGTTGAGAGCTC 8442
Query 124597 ATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656
| || || ||| ||| | || ||| || || |||||||||||||||||||| || |
Sbjct 8443 A-GACACGATTGACAATGTGAAGGCGAAGATACAGGATAAAGAAGGTATACCACCGGACC 8501
Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716
| || ||||| || ||||| ||||| || || |||||| || | || | | ||||| |
Sbjct 8502 AGCAGAGGCTCATCTTTGCTGGAAAGCAGTTGGAGGATGGTAGGACCCTGGCTGATTACA 8561
Query 124717 ATATTCAAAAAGAATCAAC 124735
|||| || || || || ||
Sbjct 8562 ATATCCAGAAGGAGTCTAC 8580
>seq140002
Length=100703
Score = 116 bits (128), Expect = 6e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| |||| || | ||||| || ||||| || | ||| |||| |
Sbjct 55561 ATGCAGATCTTTGTAAAAACTTTGACAGGAAAGACTATTACCCTTGAGGTTGAGAGTTCT 55620
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||||||| ||| | ||| ||||| || ||||||||||| || || || |||||
Sbjct 55621 GATACAATTGACAATGTCAAAGCTAAAATCCAGGATAAAGAAGGCATTCCTCCAGATCAG 55680
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| ||| | || ||||| ||||| ||| | |||||| |||| || | | || || |||
Sbjct 55681 CAGAGGTTGATCTTTGCTGGAAAGCAACTTGAGGATGGTCGTACCCTTGCTGACTACAAT 55740
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGT 124747
||||| || ||||| ||| | ||| ||||
Sbjct 55741 ATTCAGAAGGAATCCACTCTCCATCTGGT 55769
Score = 116 bits (128), Expect = 6e-21
Identities = 168/232 (72%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
|||||||| ||| | || || | || || |||||||| ||| | || |||| |||
Sbjct 55789 ATGCAAATCTTTGTGAAAACCTTGACCGGGAAAACTATTACTCTTGAAGTTGAGAGCTCG 55848
Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656
|| || || ||| |||| || |||||||||||||| ||||| || |||||||| |
Sbjct 55849 -GACACCATCGACAATGTTAAGGCA-AAAATTCAAGATAAGGAAGGGATTCCACCTGACC 55906
Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716
| || |||||||||||||| || || || | |||||| | | ||| ||| ||||| |
Sbjct 55907 AGCAGAGGCTTATTTTTGCTGGGAAGCAGCTTGAGGATGGAAGGACACTAGCTGATTACA 55966
Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
| || || || |||||||| | |||||||| | || | | ||||||||
Sbjct 55967 ACATCCAGAAGGAATCAACCCTCCATTTGGTGCTGCGCCTTAGGGGTGGTAT 56018
Score = 114 bits (126), Expect = 2e-20
Identities = 173/242 (71%), Gaps = 3/242 (1%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
||||| || ||| | ||||| | || || || || || || | ||| |||| |||
Sbjct 56245 ATGCAGATTTTTGTCAAGACTTTGACTGGGAAGACGATCACCTTGGAGGTTGAGAGCTCG 56304
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
||||| ||| ||| | || || ||||| ||||| || ||||| ||||| || ||
Sbjct 56305 -GATACCATTGACAATGTGAAGGCAAAGATTCAGGATAAGGAGGGTATTCCACCAGACCA 56363
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|| ||||| |||||||| || || || | |||||| |||| || | | ||||||||
Sbjct 56364 GCAGAGGCTGATTTTTGCTGGTAAGCAGCTGGAGGATGGTCGTACCCTTGCTGATTATAA 56423
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG-TATTAAAAATT 124776
||||| |||||||||||| | || ||||| | ||| | || ||||| | || | ||||
Sbjct 56424 CATTCAGAAAGAATCAACTCTTCACCTGGTTCTTCGTCTCCGTGGTGGCTTTTGAGAATT 56483
Query 124777 CA 124778
||
Sbjct 56484 CA 56485
Score = 109 bits (120), Expect = 8e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| | |||||||| ||||| |||||||| || | ||| |||| |
Sbjct 56017 ATGCAGATCTTTGTGAAGACACTGACAGGGAAAACTATCACCCTTGAGGTTGAGAGTTCT 56076
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || || |||| | || |||||||||||||| ||||| || |||||||| ||
Sbjct 56077 GACACCATCGATAATGTCAAGGCTAAAATTCAAGATAAGGAAGGGATCCCACCTGACCAG 56136
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| ||| | |||||||| || || || | |||||| | | || | | ||||| ||
Sbjct 56137 CAGAGGTTAATTTTTGCTGGGAAGCAGCTTGAGGATGGGAGGACTCTTGCTGATTACAAC 56196
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| || ||||| || || | |||||||| | || || |||| || ||
Sbjct 56197 ATCCAGAAAGAGTCCACACTCCATTTGGTGCTCCGCTTGAGAGGAGGGAT 56246
>seq72314
Length=63918
Score = 116 bits (128), Expect = 6e-21
Identities = 149/204 (73%), Gaps = 1/204 (0%)
Strand=Plus/Plus
Query 124533 AATACA-ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA 124591
|||||| ||||| || ||| | || || |||| || ||||| || || | || ||||
Sbjct 54539 AATACAGATGCAGATCTTTGTTAAAACCTTAACTGGAAAAACCATCACACTGGAAGTTGA 54598
Query 124592 AGCAAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACC 124651
| || || || |||| | || |||||||||||| || || ||||| || ||
Sbjct 54599 AAGCTCGGACACGATAGATAATGTTAAGGCGAAAATTCAAGACAAGGAGGGTATCCCGCC 54658
Query 124652 TGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGA 124711
||||| || ||||| ||||||||||| |||||||| || ||| | || || | | |||
Sbjct 54659 GGATCAGCAGAGGCTGATTTTTGCAGGGAAACAATTGGAAGATGGGCGTACTCTCGCAGA 54718
Query 124712 TTATAATATTCAAAAAGAATCAAC 124735
|||||| |||||||| || |||||
Sbjct 54719 TTATAACATTCAAAAGGAGTCAAC 54742
Score = 113 bits (124), Expect = 7e-20
Identities = 146/199 (73%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAA 124596
||||||||| ||| | ||||| |||| || ||||| || || | || |||| |||
Sbjct 55457 AATGCAAATCTTTGTTAAGACCTTAACTGGAAAAACAATCACGTTGGAAGTTGAGAGCTC 55516
Query 124597 ATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656
|| || ||| ||| | || |||||||||||||| ||||| || ||||| ||||
Sbjct 55517 G-GACACGATTGACAATGTTAAGGCCAAAATTCAAGATAAGGAAGGCATTCCACCGGATC 55575
Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716
| || ||||| ||||||||||| |||||||| || ||| | | || | | || ||||
Sbjct 55576 AGCAGAGGCTGATTTTTGCAGGGAAACAATTGGAAGATGGGAGGACTCTTGCTGACTATA 55635
Query 124717 ATATTCAAAAAGAATCAAC 124735
| |||||||| || |||||
Sbjct 55636 ACATTCAAAAGGAGTCAAC 55654
Score = 109 bits (120), Expect = 8e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| ||| | || || | || || ||||| || || | || | |||
Sbjct 54774 ATGCAAATTTTTGTTAAAACCTTGACTGGGAAAACAATCACATTGGAAGTCGAAAGCTCG 54833
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| |||| | || ||||| |||||||| |||||||||||||| ||||||
Sbjct 54834 GACACGATTGATAATGTTAAGGCCAAAATCCAAGATAAGGAAGGTATACCACCAGATCAA 54893
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||| | | || |||||||||||||| | |||||| | || || | | ||||| |||
Sbjct 54894 CAACGTTTGATCTTTGCAGGAAAACAGCTCGAGGATGGACGGACTCTCGCGGATTACAAT 54953
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| || || ||||| | || | ||| | ||| | || ||||| ||
Sbjct 54954 ATTCAGAAGGAGTCAACACTCCACCTTGTTCTTCGTCTCCGTGGTGGAAT 55003
Score = 95.1 bits (104), Expect = 2e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| | ||||| | || || || || || || | ||| | || |
Sbjct 55230 ATGCAGATCTTTGTGAAGACGTTGACGGGGAAGACGATCACGTTGGAGGTGGAGAGTTCT 55289
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| ||| ||| | || || || || ||||| || ||||| ||||| || ||
Sbjct 55290 GATACCATTGACAATGTGAAGGCCAAGATACAGGATAAGGAGGGTATTCCACCAGACCAG 55349
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| || || ||||||||||| |||||||| || ||| | | || | | ||||||||||
Sbjct 55350 CAGAGACTGATTTTTGCAGGGAAACAATTGGAAGATGGAAGGACTCTCGCAGATTATAAT 55409
Query 124719 ATTCAAAAAGAATCAAC 124735
|||||||| ||||| ||
Sbjct 55410 ATTCAAAAGGAATCCAC 55426
>seq188529
Length=122975
Score = 107 bits (118), Expect = 3e-18
Identities = 164/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
||||| |||||| |||||||||| || || ||||| || ||| | ||| |||| || |
Sbjct 109028 ATGCAGATATTTGTAAAGACACTCACTGGAAAAACCATTACTCTCGAGGTTGAGAGTTCA 109087
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| |||||| ||| | || ||||||||||| || ||||| || || ||||| ||
Sbjct 109088 -GACACAATTGATAACGTGAAGGCCAAAATTCAAGACAAGGAAGGAATTCCCCCTGACCA 109146
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|| | | || |||||||| || ||| | || ||| | | ||| | | ||||||||
Sbjct 109147 GCAGCGATTGATATTTGCAGGGAAGCAACTTGAAGATGGAAGGACACTTGCTGATTATAA 109206
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| || || || || || | ||| |||| || ||||| | || |||||
Sbjct 109207 CATACAGAAGGAGTCGACACTTCATCTGGTGTTGCGTTTGAGGGGAGGTAT 109257
Score = 91.5 bits (100), Expect = 2e-13
Identities = 88/113 (78%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682
|||||||| ||||||||||| || ||||| ||||| || ||||| || ||||| || ||
Sbjct 109340 AAAATTCAGGATAAAGAAGGGATCCCACCAGATCAGCAGAGGCTCATATTTGCTGGTAAG 109399
Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAAC 124735
|| | |||||| | || || | | |||||| ||||| ||||| ||||| ||
Sbjct 109400 CAGCTGGAGGATGGGCGCACCCTTGCAGATTACAATATCCAAAAGGAATCCAC 109452
>seq198291
Length=74715
Score = 105 bits (116), Expect = 1e-17
Identities = 97/123 (79%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 124629 CAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTA 124688
|| || |||||||| ||||| |||||||| || ||| | |||||||| |||||||| ||
Sbjct 28542 CAGGACAAAGAAGGGATACCTCCTGATCAGCAGAGGTTGATTTTTGCTGGAAAACAGTTG 28601
Query 124689 GAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTT 124748
|| ||| ||||||| | | ||||| ||||| || ||||||||||| | || |||||
Sbjct 28602 GAAGATGGTCGAACTCTGGCTGATTACAATATCCAGAAAGAATCAACACTTCACCTGGTT 28661
Query 124749 TTA 124751
|||
Sbjct 28662 TTA 28664
>seq184254
Length=183585
Score = 104 bits (114), Expect = 4e-17
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 124629 CAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTA 124688
|| ||||||||||| ||||| |||||||| || || || |||||||| || ||||| ||
Sbjct 180573 CAGGATAAAGAAGGCATACCTCCTGATCAGCAGAGACTGATTTTTGCTGGGAAACAGTTG 180632
Query 124689 GAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTT 124748
|| ||| |||| || | | ||||| |||||||| |||||||||||| | || | |||
Sbjct 180633 GAAGATGGTCGGACCCTGGCTGATTACAATATTCAGAAAGAATCAACTCTTCACCTCGTT 180692
Query 124749 TT 124750
||
Sbjct 180693 TT 180694
>seq242921
Length=127737
Score = 102 bits (112), Expect = 1e-16
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| | |||||| | ||||| || || || || | ||| | ||| |
Sbjct 49791 ATGCAGATCTTTGTGAAGACATTGACAGGGAAGACAATCACCTTGGAGGTCGAAAGTTCT 49850
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||||||| |||| | || ||| || |||||||||||||| || ||||| |||||
Sbjct 49851 GATACAATTGATAATGTGAAGGCGAAGATCCAAGATAAAGAAGGGATTCCACCGGATCAG 49910
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| | | || ||||| || || || | |||||| | | || | | |||||||||
Sbjct 49911 CAGCGATTGATCTTTGCTGGTAAGCAGCTTGAGGATGGGAGGACCCTTGCTGATTATAAT 49970
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGT 124747
|| || || || || || ||||||||||
Sbjct 49971 ATCCAGAAGGAGTCCACACTGCATTTGGT 49999
>seq146937
Length=209544
Score = 96.9 bits (106), Expect = 5e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
|||||| || ||| | ||||| | || || ||||| || ||| | ||| | |||
Sbjct 83623 AATGCAGATTTTTGTCAAGACTTTGACCGGGAAAACCATCACTCTTGAGGTGGAAAGCTC 83682
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
||| || || || | || ||| || || ||||| || ||||| ||||| |||||
Sbjct 83683 TGACACTATCGACAACGTTAAGGCGAAGATCCAGGATAAGGAGGGTATCCCACCAGATCA 83742
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|||||||| || ||||| || || || || || ||| | ||||| | | ||||| ||
Sbjct 83743 GCAAAGGCTGATCTTTGCTGGTAAGCAGTTGGAAGATGGCCGAACCCTTGCTGATTACAA 83802
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| || || || ||||||||||| | || | ||| | || ||||| ||
Sbjct 83803 CATCCAGAAGGAGTCAACTTTGCACCTTGTGCTTCGTCTTCGTGGTGGGAT 83853
>seq157592
Length=32097
Score = 87.8 bits (96), Expect = 3e-12
Identities = 161/235 (69%), Gaps = 1/235 (0%)
Strand=Plus/Minus
Query 124535 TACA-ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAG 124593
|||| ||||| || || | || || ||||| || || || || ||| | ||| ||||
Sbjct 25112 TACAGATGCAGATCTTCGTGAAAACCCTAACCGGAAAGACCATCACTCTCGAGGTTGAGA 25053
Query 124594 CAAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTG 124653
|| ||||| || ||||| ||||| || || || ||||| || || || |
Sbjct 25052 GTTCCGACACAATCGACAACGTAAAAGCCAAAATCCAGGACAAGGAAGGAATTCCCCCAG 24993
Query 124654 ATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATT 124713
|||| ||||||||||| || || || || || | ||||| | || || ||| ||||
Sbjct 24992 ATCAGCAAAGGCTTATCTTCGCCGGCAAGCAGCTTGAGGACGGACGTACCCTAGCCGATT 24933
Query 124714 ATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
| || || || || ||||| || |||| ||||| | ||| | || ||||| ||
Sbjct 24932 ACAACATCCAGAAGGAATCTACCCTGCACTTGGTCCTCCGTCTGCGTGGTGGGAT 24878
>seq182928
Length=15200
Score = 84.2 bits (92), Expect = 3e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
|||||||| ||| | || || || || || || ||||| || | ||| | || ||| |
Sbjct 4380 ATGCAAATCTTTGTTAAAACTCTGACCGGAAAGACTATTACGCTTGAGGTCGAGAGCTCA 4439
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| || ||| ||| | || || || || ||||| || ||||| || ||||||||
Sbjct 4440 -GACACCATTGACAATGTCAAGGCAAAGATCCAGGATAAGGAGGGTATTCCTCCTGATCA 4498
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
||||||| | |||||||| || || ||| | || |||||| |||| | | || || ||
Sbjct 4499 ACAAAGGTTGATTTTTGCTGGCAAGCAACTTGAAGATAGTAGAACTCTTGCTGACTACAA 4558
Query 124718 TATTCAAAAAGAATCAAC 124735
|| || || || || ||
Sbjct 4559 CATCCAGAAGGAGTCCAC 4576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 753058201542400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |