Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20sylvestris_20[refseq_20GCF_5F000393655.1_202013-05-16] 253,918 sequences; 2,221,987,173 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq72314 111 1e-19 seq146937 109 4e-19 seq188529 104 2e-17 seq175354 104 2e-17 seq232054 102 6e-17 seq196472 102 6e-17 seq140002 100 2e-16 seq242921 96.9 3e-15 seq182928 96.9 3e-15 seq182284 91.5 1e-13 seq157592 91.5 1e-13 seq179153 87.8 1e-12 seq192764 86.0 5e-12 seq224189 84.2 2e-11 seq28647 84.2 2e-11 seq24881 84.2 2e-11 >seq72314 Length=63918 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 ||||||| ||||| || | ||| | ||||| ||||| || || || ||||| ||||| Sbjct 55230 TGCCACCCCTCAACCTGAGAACAAGGTGAAGAGTGGATTCCTTCTGGATGTTATAATCAG 55171 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 ||| |||| | ||||||||||| || ||||| | |||| | || ||||| | Sbjct 55170 CCAGAGTTCTTCCATCTTCTAATTGCTTCCCAGCAAAAATCAGCCTCTGCTGGTCTGGCG 55111 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 | || ||||| || || ||||| |||| ||| | || || || || | || | Sbjct 55110 GGATACCTTCCTTATCTTGGATTTTCGTCTTAACATTATCAATTGTGTCCGAGCTCTCAA 55051 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 | || || ||||||||||| ||||| | ||||| ||||| |||||||| Sbjct 55050 CTTCCAATGTAATGGTTTTCCCTGTTAAGGTTTTAACAAAGATTTGCAT 55002 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| || | || | ||| | ||||||||||| || ||||| || || ||||| Sbjct 55456 CCACCCCTTAGCCTAAGAACAAGGTGAAGGGTGGATTCCTTTTGAATATTATAATCTGCG 55397 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | || | ||||| |||||||| || || | |||| | || ||||| |||| Sbjct 55396 AGAGTCCTTCCATCTTCCAATTGTTTCCCTGCAAAAATCAGTCTCTGCTGGTCTGGTGGA 55337 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || || || || || || ||| ||| ||| | || |||||||| | | || || Sbjct 55336 ATACCCTCCTTATCCTGTATCTTGGCCTTCACATTGTCAATGGTATCAGAACTCTCCACC 55277 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || || || || || |||| || || ||||| || ||||| Sbjct 55276 TCCAACGTGATCGTCTTCCCCGTCAACGTCTTCACAAAGATCTGCAT 55230 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 || || || || || || || || |||||||| ||| | | | || || | ||| Sbjct 54976 TGGAGTGTTGACTCCTTCTGAATATTGTAATCCGCGAGAGTCCGTCCATCCTCGAGCTGT 54917 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || || || | |||||||||||||| || ||| || ||||| || || |||||| Sbjct 54916 TTTCCTGCAAAGATCAAACGTTGTTGATCTGGTGGTATACCTTCCTTATCTTGGATTTTG 54857 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| ||| | || || || || |||| || || || || || ||||| || ||| Sbjct 54856 GCCTTAACATTATCAATCGTGTCCGAGCTTTCGACTTCCAATGTGATTGTTTTCCCAGTC 54797 Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363 | ||||| |||||||||||||| Sbjct 54796 AAGGTTTTAACAAAAATTTGCAT 54774 >seq146937 Length=209544 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || |||||||| || || || || ||||||||||| ||| |||| ||||||| Sbjct 83376 ACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAATCAGCTAGGGTTCTGCCGTCTTCG 83317 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | ||| || || ||| | ||||| | ||| ||||| ||| ||||| || ||||| | Sbjct 83316 AGTTGCTTTCCGGCGAAAATCAACCTTTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGA 83257 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || || ||| || | || || || ||| |||| || || | ||| || ||||| Sbjct 83256 ATCTTAGCCTTAACGTTGTCGATAGTGTCGGAGCTTTCGACTTCAAGGGTGATTGTTTTC 83197 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || || ||||| ||||| ||||||||| Sbjct 83196 CCGGTTAGGGTTTTAACAAAGATTTGCATA 83167 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || |||||||| || || || || |||||||| ||| ||| |||| ||||||| Sbjct 83148 ACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTACCGTCTTCG 83089 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | || || || ||| | ||||| | || ||||| ||| |||||||||||||| | Sbjct 83088 AGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATTCCTTCTTTGTCCTGA 83029 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || || ||| || | || || || ||| |||| || || | ||| || ||||| Sbjct 83028 ATCTTAGCCTTAACGTTGTCAATAGTGTCGGAGCTTTCAACCTCAAGGGTGATTGTTTTT 82969 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || ||||| || || || ||||| Sbjct 82968 CCGGTTAGGGTTTTCACGAAGATCTGCAT 82940 >seq188529 Length=122975 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || || ||||| | || || | |||||| || || || || |||||||| ||||| Sbjct 109254 CCTCCCCTCAAACGCAACACCAGATGAAGTGTCGACTCCTTCTGTATGTTATAATCAGCA 109195 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | || | ||||| | ||| || || || ||||||| || || ||||| ||| Sbjct 109194 AGTGTCCTTCCATCTTCAAGTTGCTTCCCTGCAAATATCAATCGCTGCTGGTCAGGGGGA 109135 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 |||||||| ||||| ||||||| ||| || | || || || || | | || || Sbjct 109134 ATTCCTTCCTTGTCTTGAATTTTGGCCTTCACGTTATCAATTGTGTCTGAACTCTCAACC 109075 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || | ||||||||||| || || || || |||||||| || ||||| Sbjct 109074 TCGAGAGTAATGGTTTTTCCAGTGAGTGTCTTTACAAATATCTGCAT 109028 >seq175354 Length=42077 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 15162 GAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGTT 15221 |||||||||| ||||| || |||||||| || ||| |||| | ||||| | ||| | Sbjct 17730 GAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGCAAGAGTTCTATCATCTTCAAGTTGCT 17789 Query 15222 TGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTGC 15281 ||||||| | ||||| | |||||| || ||||| || ||||| || || || Sbjct 17790 TGCCAGCAAAAATCAACCTTTGTTGATCAGGAGGAATACCCTCTTTATCCTGGATCTTTA 17849 Query 15282 TCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAG-GTAATGGTTTTACCTGTC 15340 ||| ||| | || ||||| || || || || | |||| ||| | || || || ||| Sbjct 17850 CCTTGACATTGTCAATGGTGTCTGAGTTCTCGACCT-TAAGCGTACTAGTCTTTCCGGTC 17908 Query 15341 AGAGTTTTTACAAAAATTTGCATA 15364 |||||||| ||||| ||||||||| Sbjct 17909 AGAGTTTTAACAAAGATTTGCATA 17932 >seq232054 Length=109336 Score = 102 bits (112), Expect = 6e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| |||||||| || || || |||||||| || ||| ||| | || || | || Sbjct 62201 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGTGTTCGGCCATCCTCAAGCTG 62142 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 || || ||| | ||||| || || ||||| |||||| ||||| ||||| ||| || Sbjct 62141 CTTACCTGCGAAAATCAACCGCTGCTGGTCCGGTGGAATGCCTTCCTTGTCCTGAATCTT 62082 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTT-TCTACATCTAAGGTAATGGTTTTACCTG 15338 ||| ||| | || ||||| || | || ||||| ||||||||||| || ||||| | Sbjct 62081 AGCCTTAACATTGTCAATGGTGTC-CGATGACTCTACCTCTAAGGTAATAGTCTTACCCG 62023 Query 15339 TCAGAGTTTTTACAAAAATTTGCATATTTG 15368 |||| || || || || || ||||| |||| Sbjct 62022 TCAGGGTCTTCACGAATATCTGCATCTTTG 61993 >seq196472 Length=12654 Score = 102 bits (112), Expect = 6e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 ||||||| ||||| || | ||| | ||||||||||| || || || ||||| ||||| Sbjct 8156 TGCCACCCCTCAACCTGAGAACAAGGTGAAGGGTGGATTCCTTCTGGATGTTATAATCAG 8097 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 ||| ||| | ||||||||||| || ||||| | |||| | || || || || Sbjct 8096 CCAGAGTTCGTCCATCTTCTAATTGCTTCCCAGCAAAAATCAGCCTCTGCTGATCCGGTG 8037 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 | || || || ||||| |||||| ||| ||| | ||||| || || | || | Sbjct 8036 GGATACCCTCCTTGTCTTGAATTTTAGCCTTAACATTGTCTATCGTGTCCGAGCTCTCAA 7977 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 | || || || || ||||| || || | || || |||||||||||||| Sbjct 7976 CTTCCAACGTGATTGTTTTTCCAGTTAAGGTCTTAACAAAAATTTGCAT 7928 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 |||| || || || || || ||||| ||||| ||||| ||| |||| | |||||| Sbjct 8364 ACTAGGTGGAGTGTCGACTCCTTTTGAATGTTATAATCAGCCAGAGTTCTTCCATCTTCT 8305 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 |||||||| || || | ||||| | ||| || || ||| || || || || || Sbjct 8304 AATTGTTTCCCTGCAAAAATCAATCTTTGCTGATCTGGTGGGATACCCTCCTTATCCTGT 8245 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || ||| ||| ||| | || ||||||||| | | || || || || || || || || Sbjct 8244 ATCTTGGCCTTCACATTATCAATGGTATCGGAACTCTCCACCTCCAACGTGATCGTCTTC 8185 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||||||| ||| || ||||| || ||||| Sbjct 8184 CCTGTCAAAGTCTTCACAAAGATCTGCAT 8156 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 || || || || || ||||| ||||||||||| ||| | | | || || | |||| Sbjct 7674 TGGAGAGTTGACTCCTTTTGAATGTTGTAATCCGCAAGAGTCCGTCCATCCTCGAGTTGT 7615 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || || || | |||||||||||||| || |||||| ||||||||||| ||||| Sbjct 7614 TTTCCTGCAAAGATCAAACGTTGTTGATCTGGTGGAATACCTTCTTTGTCCTGGATTTTC 7555 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 || ||| | || || || || | | || || || | || || || || || || Sbjct 7554 GATTTAACATTGTCGATCGTGTCTGAACTCTCAACTTCGAGAGTTATAGTCTTGCCAGTA 7495 Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363 ||||| |||||||| || ||||| Sbjct 7494 AGAGTCTTTACAAAGATCTGCAT 7472 >seq140002 Length=100703 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || |||||||| | | || ||||| || ||||| ||||| || ||||||||||| Sbjct 56243 CCTCCTCTCAAGCGGAGCACCAAATGGAGTGTGGACTCTTTCTGGATGTTGTAATCAGCA 56184 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | ||| | || || | || || ||||| | || || | || ||||| ||| Sbjct 56183 AGAGTCCTCCCATCCTCAAGCTGCTTCCCAGCAAAAATTAACCTCTGCTGGTCAGGTGGG 56124 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| || || |||||| ||| ||| | || ||||| || | | || || Sbjct 56123 ATCCCTTCCTTATCTTGAATTTTAGCCTTGACATTATCGATGGTGTCAGAACTCTCAACC 56064 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | ||| || ||||| |||||||| || || ||||| || |||||| Sbjct 56063 TCAAGGGTGATAGTTTTCCCTGTCAGTGTCTTCACAAAGATCTGCATA 56016 Score = 87.8 bits (96), Expect = 1e-12 Identities = 157/226 (69%), Gaps = 9/226 (4%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 || ||||| || || ||||| || ||||| ||| ||| ||| | || ||||| || Sbjct 55307 TGGAGGGTAGATTCCTTTTGGATATTGTAGTCGGCAAGAGTTCGGCCATCCTCTAACTGC 55248 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAAT-TTT 15279 || ||||| | ||||| | ||| || || ||||||||||| || || || ||| Sbjct 55247 TTTCCAGCAAAGATCAACCTTTGCTGATCCGGAGGAATTCCTTCCTTATCTTGGATCTTT 55188 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 || ||| ||| | || || || || | | || || || | || |||||||| || || Sbjct 55187 GC-CTTAACATTGTCGATAGTGTCTGAACTCTCAACCTCGAGAGTGATGGTTTTGCCAGT 55129 Query 15340 CAGAGTTTTTACAAAAATTTGCAT-----ATT--TGAAAATAAAAT 15378 || || |||||||| |||||||| ||| |||||| ||||| Sbjct 55128 GAGGGTCTTTACAAAGATTTGCATCTATAATTCATGAAAAGAAAAT 55083 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| |||| || | || | ||| || ||||| || || || || ||||| || Sbjct 55787 CCACCCCTCAGCCTCAGCACCAGATGGAGAGTGGATTCCTTCTGAATATTGTAGTCAGCA 55728 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | | | || || | ||| || ||||| | ||||| | || || || ||| Sbjct 55727 AGGGTACGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGAGGA 55668 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || |||||||| || ||||| ||| || ||| | || || ||||| | | || || Sbjct 55667 ATGCCTTCTTTATCCTGGATTTTAGCT-TTGACATTGTCAATTGTATCAGAACTCTCAAC 55609 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | |||||| || || ||||||| |||||||||||| || |||||| Sbjct 55608 CTCAAGGGTAATAGTCTTTCCTGTCAAAGTTTTTACAAAGATCTGCATA 55560 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || ||||| ||||| || || || || ||||||||||| ||| | || | || || Sbjct 55997 ACCAAATGGAGGGTTGATTCCTTCTGGATGTTGTAATCAGCTAGTGTCCTTCCATCCTCA 55938 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | || || ||||| | || | | || ||||| |||||| ||||| || || | Sbjct 55937 AGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCAGGTGGAATCCCTTCCTTATCTTGA 55878 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 ||||| ||| ||| | || ||||| || | || || || | ||||| ||||| Sbjct 55877 ATTTTTGCCTTAACATTGTCGATGGTGTCCGAGCTCTCAACTTCAAGAGTAATAGTTTTC 55818 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || |||| ||||| ||||| ||||||||| Sbjct 55817 CCGGTCAAGGTTTTCACAAAGATTTGCATA 55788 >seq242921 Length=127737 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||||||||| || ||||| |||||||| ||| ||| | | | || |||| || Sbjct 49081 TGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCAAGAGTGCGGCCATCCTCTAGCTGC 49022 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || ||||| | ||||| | || || ||| || |||||||| ||||| || || Sbjct 49021 TTTCCAGCAAAGATCAACCTCTGCTGATCGGGAGGGATTCCTTCCTTGTCCTGGATCTTA 48962 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| ||| | || || || ||| | | || || || | ||||||||||| || || Sbjct 48961 GCCTTGACATTATCAATAGTGTCGGAACTCTCAACCTCGAGAGTAATGGTTTTTCCGGTG 48902 Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363 || || |||||||| |||||||| Sbjct 48901 AGCGTCTTTACAAAGATTTGCAT 48879 >seq182928 Length=15200 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||||||||| || || || |||||||| || ||| |||| ||||| | ||| Sbjct 4582 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCTACTATCTTCAAGTTGC 4523 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAAT-TTT 15279 |||||||| | ||||| | |||||| || ||||| || || || || || ||| Sbjct 4522 TTGCCAGCAAAAATCAACCTTTGTTGATCAGGAGGAATACCCTCCTTATCCTGGATCTTT 4463 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 || ||| ||| | || ||||| || | || || || | ||||| || || || || Sbjct 4462 GC-CTTGACATTGTCAATGGTGTCTGAGCTCTCGACCTCAAGCGTAATAGTCTTTCCGGT 4404 Query 15340 CAGAGTTTTTACAAAAATTTGCATA 15364 ||||||||| ||||| ||||||||| Sbjct 4403 CAGAGTTTTAACAAAGATTTGCATA 4379 Score = 93.3 bits (102), Expect = 3e-14 Identities = 163/231 (71%), Gaps = 5/231 (2%) Strand=Plus/Minus Query 15135 TGCCACCTCTCAATCTTAA-AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCG 15193 |||||||||| || | || ||| | || ||||| || ||||| || ||||||||||| Sbjct 4835 TGCCACCTCT-AAGATGAAGAACAAGGTGCAGGGTTGACTCTTTCTGAATGTTGTAATCT 4777 Query 15194 CTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTT 15253 | | | | ||| |||| || | ||| || ||||| | |||| | || ||||| Sbjct 4776 GTCA-ATTCCTCCCGTCCTCAAGTTGCTTCCCAGCAAAGATCAGTCTCTGCTGGTCTGGA 4718 Query 15254 GGAATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTC 15312 ||||| ||||| ||||| || |||||| || ||| | || |||||||| | |||| Sbjct 4717 GGAATACCTTCCTTGTCTTGGATCTTTGCT-TTAACATTGTCGATGGTATCTTAACTTTC 4659 Query 15313 TACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || | ||| || || || || || || || || ||||| || ||||| Sbjct 4658 AACTTCAAGGGTGATTGTCTTGCCGGTAAGCGTCTTGACAAAGATCTGCAT 4608 >seq182284 Length=106024 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| |||||||| || || || ||| |||| || ||| ||| | || || | || Sbjct 1226 ATGGAGGGTGGACTCCTTCTGGATGCTGTAGTCAGCTAGTGTTCGGCCATCCTCAAGCTG 1285 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 || || ||| | ||||| || || ||||| |||||| || || ||||| ||| || Sbjct 1286 CTTACCTGCGAAAATCAACCGCTGGTGGTCCGGTGGAATGCCCTCCTTGTCCTGAATCTT 1345 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTT-TCTACATCTAAGGTAATGGTTTTACCTG 15338 ||| ||| | || ||||| || |||| ||||| ||||||||||| || || || | Sbjct 1346 AGCCTTAACATTGTCAATGGTGTC-CTATGACTCTACCTCTAAGGTAATAGTCTTCCCCG 1404 Query 15339 TCAGAGTTTTTACAAAAATTTGCATATTT 15367 |||| || || || || || ||||| ||| Sbjct 1405 TCAGGGTCTTCACGAATATCTGCATCTTT 1433 >seq157592 Length=32097 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 |||||||| || || || || |||||||||||| || | | | || || | || Sbjct 24677 TGAAGGGTAGACTCCTTCTGGATGTTGTAATCGGCGAGGGTACGGCCATCCTCGAGCTGC 24736 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 ||||| ||| | ||||| | || ||||| ||||||||| || || || ||||||| Sbjct 24737 TTGCCGGCGAAGATCAACCTCTGCTGGTCTGGTGGAATTCCCTCCTTATCCTGAATTTTG 24796 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| ||| | || ||||| || | |||| || || | ||| || ||||| || || Sbjct 24797 GCCTTGACATTATCAATGGTGTCAGAACTTTCGACCTCAAGGGTGATTGTTTTGCCGGTG 24856 Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363 || ||||| || || || ||||| Sbjct 24857 AGGGTTTTGACGAAGATCTGCAT 24879 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 |||||||| || || || || ||||||||||| ||| | | | || || | || Sbjct 24449 TGAAGGGTCGATTCCTTCTGGATGTTGTAATCAGCTAGGGTACGGCCATCCTCGAGCTGC 24508 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 ||||||||| ||||||| | || ||||| ||||| || || || || ||||||| Sbjct 24509 TTGCCAGCGAATATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTATCCTGAATTTTG 24568 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| ||| | || ||||| || | | || || || | ||| ||||| || || || Sbjct 24569 GCCTTGACATTGTCGATGGTGTCAGAACTCTCGACCTCAAGGGTGATGGTCTTGCCGGTG 24628 Query 15341 AGAGTTTTTACAAAAATTTGCATA 15364 || ||||| || || || |||||| Sbjct 24629 AGGGTTTTGACGAAGATCTGCATA 24652 >seq179153 Length=7583 Score = 87.8 bits (96), Expect = 1e-12 Identities = 148/213 (69%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || | ||| || ||||| || || || || |||||||| || ||| | || Sbjct 4543 AACACAAGATGGAGAGTGGATTCCTTCTGGATATTGTAATCAGCAAGTGTTCGACCATCC 4602 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | |||||| ||||| | || || | |||||| || ||||||||||| ||||| Sbjct 4603 TCGAGTTGTTTTCCAGCAAAAATTAACCTTTGTTGATCTGGAGGAATTCCTTCCTTGTCT 4662 Query 15272 CAAATTTTGCTCTTTACAATT-TCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330 |||||| | || ||| || || ||||| || | || || || | |||||||| Sbjct 4663 TGAATTTTTGTTTTAACATTTATCAATGGTGTCCGAGCTCTCAACCTCGAGTGTAATGGT 4722 Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || ||||| || || || ||||| |||||||| Sbjct 4723 CTTTCCTGTGAGTGTCTTAACAAAGATTTGCAT 4755 >seq192764 Length=177479 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 |||||| || || || || || |||||||||||| ||| ||| ||||||| | || Sbjct 143333 ATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGCTAGGGTTCGGCCGTCTTCAAGCTG 143392 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 || || ||| | |||| ||| || || || ||||| ||||| || || || || Sbjct 143393 CTTTCCGGCGAAAATCAGACGCTGCTGATCTGGGGGAATCCCTTCCTTATCTTGGATCTT 143452 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 | || ||| | || || || ||| | ||| || || | ||| || |||||||| || Sbjct 143453 GGCTTTCACATTGTCGATTGTGTCGGAAGATTCAACCTCAAGGGTGATTGTTTTACCCGT 143512 Query 15340 CAGAGTTTTTACAAAAATTTGCATATT 15366 || ||||| || || || ||||| || Sbjct 143513 TAGGGTTTTCACGAAGATCTGCATCTT 143539 >seq224189 Length=50442 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || ||||| || ||||| || || || ||||||||||| |||| ||| | || || Sbjct 16419 ACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAATCAGCTAGAGTTCGACCATCCTCG 16478 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | ||||| || ||| | || | || || ||||| ||| || ||||| ||||| Sbjct 16479 AGCTGTTTTCCGGCGAAAATGAGCCGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTGG 16538 Query 15275 AT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 || ||||| ||| || | || || || ||| ||| || || | ||| ||||| || Sbjct 16539 ATCTTTGC-CTTCACGTTGTCGATTGTGTCGGAGGATTCGACCTCAAGGGTGATGGTCTT 16597 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 ||| ||||| ||||| || || || ||||| || Sbjct 16598 ACCCGTCAGGGTTTTCACGAAGATCTGCATCTT 16630 >seq28647 Length=54725 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/224 (68%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || | ||| || ||||| || || || ||||| ||||| || ||| | ||| Sbjct 9666 AACACAAGATGGAGTGTGGATTCCTTCTGAATGTTATAATCAGCAAGTGTTCGACCATCT 9607 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | |||||| ||||| || || || | ||||||||| ||||||||||| ||||| Sbjct 9606 TCGAGTTGTTTTCCAGCATAAATTAACCTTTGTTGGTCTGGAGGAATTCCTTCCTTGTCT 9547 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 ||| || | || ||| | || ||||| || | || || || | || ||||| Sbjct 9546 TGAATCTTTGTTTTAACATTGTCAATGGTGTCTGAGCTCTCAACTTCGAGTGTTATGGTC 9487 Query 15332 TTACCTGTCAGAGTTTTTACAAA----AATTTGCATATTTGAAA 15371 || || || || || || || || ||||||||||| || || Sbjct 9486 TTTCCAGTAAGGGTCTTGACGAAGATTAATTTGCATATCTGTAA 9443 >seq24881 Length=242481 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || ||||| || ||||| || || | ||||||||||| |||| ||| | || || Sbjct 141192 ACCAAATGGAGAGTGGACTCCTTCTAGATGTTGTAATCAGCTAGAGTTCGACCATCCTCA 141133 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | ||||| || ||| | || | || || ||||| ||| || ||||| ||||| Sbjct 141132 AGCTGTTTTCCGGCGAAAATGAGCCGCTGCTGGTCCGATGGGATGCCTTCCTTGTCCTGG 141073 Query 15275 AT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 || ||||| ||| || | || || || ||| ||| || || | ||||||||| || Sbjct 141072 ATCTTTGC-CTTCACGTTATCAATTGTGTCGGAGGATTCGACCTCAAGGGTAATGGTCTT 141014 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 ||| ||||| ||||| || || || ||||| || Sbjct 141013 ACCCGTCAGGGTTTTCACGAAGATCTGCATCTT 140981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361058390966838