Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20sylvestris_20[refseq_20GCF_5F000393655.1_202013-05-16] 253,918 sequences; 2,221,987,173 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq238297 95.1 3e-14 >seq238297 Length=50983 Score = 95.1 bits (104), Expect = 3e-14 Identities = 104/137 (76%), Gaps = 1/137 (1%) Strand=Plus/Minus Query 111689 TCATCTTATG-TGCCAGTTTTATGTACACGACGGGATGCTTTCATGCCAAATGTATCAGC 111747 ||||||| || | ||||| |||||| | ||||| | | || || || |||||||||| Sbjct 25281 TCATCTTGTGGTTGCAGTTCTATGTAGCCAACGGGGAGTTATCCTGTCAGATGTATCAGC 25222 Query 111748 GATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTT 111807 ||||||||||||| ||||| || || || ||||| |||||| ||| || | || || | Sbjct 25221 GATCTGCTGATATGGGTCTGGGAGTGCCATTTAACATTGCATCTTATGCCTTGCTGACAT 25162 Query 111808 GCTTAATCGCTCATTTT 111824 || | || |||||| || Sbjct 25161 GCATGATAGCTCATGTT 25145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1299113367963876