Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20sylvestris_20[refseq_20GCF_5F000393655.1_202013-05-16] 253,918 sequences; 2,221,987,173 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq224189 131 2e-25 seq24881 118 1e-21 seq140002 109 6e-19 seq242921 105 7e-18 seq188529 105 7e-18 seq196472 100 3e-16 seq72314 93.3 5e-14 seq146937 91.5 2e-13 seq157592 89.7 6e-13 seq232054 86.0 7e-12 seq179153 86.0 7e-12 seq58802 82.4 8e-11 >seq224189 Length=50442 Score = 131 bits (144), Expect = 2e-25 Identities = 163/221 (74%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||||||||| | ||| |||||| || || ||||||||||| ||||| || | Sbjct 16412 ACGGAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAATCAGCTAGAGTTCGACC 16471 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || ||||| || || ||||| ||||| ||||||||||| | ||| | || ||||| Sbjct 16472 ATCCTCGAGCTGTTTTCCGGCGAAAATGAGCCGCTGCTGGTCCGGTGGGATGCCTTCCTT 16531 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 |||| ||| ||| || | ||| | | | |||||| ||||| || || | |||| Sbjct 16532 GTCCTGGATCTTTGCCTTCA-CGTTGTCGATTGTGTCGGAGGATTCGACCTCAAGGGTGA 16590 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTC 42212 |||| || ||||| || || || || ||||| ||||| ||| Sbjct 16591 TGGTCTTACCCGTCAGGGTTTTCACGAAGATCTGCATCTTC 16631 >seq24881 Length=242481 Score = 118 bits (130), Expect = 1e-21 Identities = 158/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||||||||| | ||| |||||| | || ||||||||||| ||||| || | Sbjct 141199 ACGGAGCACCAAATGGAGAGTGGACTCCTTCTAGATGTTGTAATCAGCTAGAGTTCGACC 141140 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || ||||| || || ||||| ||||| ||||||||||| | ||| | || ||||| Sbjct 141139 ATCCTCAAGCTGTTTTCCGGCGAAAATGAGCCGCTGCTGGTCCGATGGGATGCCTTCCTT 141080 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 |||| ||| ||| || | | | | |||||| ||||| || || | || || Sbjct 141079 GTCCTGGATCTTTGCCTTCACGTTATCAATTGTGTCGGAGGATTCGACCTCAAGGGTAAT 141020 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTC 42212 ||| || ||||| || || || || ||||| ||||| ||| Sbjct 141019 GGTCTTACCCGTCAGGGTTTTCACGAAGATCTGCATCTTC 140980 >seq140002 Length=100703 Score = 109 bits (120), Expect = 6e-19 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| || || | ||||||||| | |||| ||| || || || ||||||||||| Sbjct 56243 CCTCCTCTCAAGCGGAGCACCAAATGGAGTGTGGACTCTTTCTGGATGTTGTAATCAGCA 56184 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||||| | | || || |||||||| ||||| || || | | ||||||||| | ||| Sbjct 56183 AGAGTCCTCCCATCCTCAAGCTGCTTCCCAGCAAAAATTAACCTCTGCTGGTCAGGTGGG 56124 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 42157 | | ||||| | | ||| |||| | |||| | | | ||||| ||| || Sbjct 56123 ATCCCTTCCTTAT-CTTGAATTTTAGCCTTGACATTATCGATGGTGTCAGAACTC---TC 56068 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | ||||| ||||| || || || ||||| |||||||| ||||| Sbjct 56067 AACCTCAAGGGTGATAGTTTTCCCTGTCAGTGTCTTCACAAAGATCTGCAT 56017 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| || || | |||| ||||||||| | || ||||| || || ||||||||||| Sbjct 56016 ACCACCCCTAAGGCGCAGCACCAAATGGAGGGTTGATTCCTTCTGGATGTTGTAATCAGC 55957 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || |||| | || || |||||||| ||||| || || || | ||||||||| | ||| Sbjct 55956 TAGTGTCCTTCCATCCTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCAGGTGG 55897 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | | ||||| | | ||| |||||| | | | | | | | ||||| |||| | Sbjct 55896 AATCCCTTCCTTAT-CTTGAATTTTTGCCTTAACATTGTCGATGGTGTCCGAGCTC---T 55841 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || | || || ||||| || || | || || |||||||||||||| Sbjct 55840 CAACTTCAAGAGTAATAGTTTTCCCGGTCAAGGTTTTCACAAAGATTTGCAT 55789 >seq242921 Length=127737 Score = 105 bits (116), Expect = 7e-18 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||| || ||||| || || ||||| || | || ||||||||||| ||||| || Sbjct 49070 CTCCTTTTGGATGTTGTAGTCGGCAAGAGTGCGGCCATCCTCTAGCTGCTTTCCAGCAAA 49011 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | | |||||| |||| || | | ||||||||| ||| || |||| | Sbjct 49010 GATCAACCTCTGCTGATCGGGAGGGATTCCTTCCTTGTCCTGGATCTTAGCCTTGACATT 48951 Query 42137 CGCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | |||||| ||| || || |||| || |||||||| || || |||||||| Sbjct 48950 ATCAATAGTGTCGGAACTC---TCAACCTCGAGAGTAATGGTTTTTCCGGTGAGCGTCTT 48894 Query 42194 TACAAAGATTTGCAT 42208 ||||||||||||||| Sbjct 48893 TACAAAGATTTGCAT 48879 Score = 102 bits (112), Expect = 9e-17 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| || | ||| | ||||||||||| |||| |||||| || ||||| |||||||| Sbjct 50017 CCTCCCCTCAGACGGAGCACCAAATGCAGTGTGGACTCCTTCTGGATATTATAATCAGCA 49958 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || |||| | | || || |||||||||||||| || || | ||||||||| || | ||| Sbjct 49957 AGGGTCCTCCCATCCTCAAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATCCGGTGG 49899 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| ||||| ||||| ||||| || | || ||||||||||| ||||| || Sbjct 49754 CTCCTTCTGAATGTTGTAGTCAGCAAGAGTGCGGCCATCCTCTAGCTGCTTTCCAGCAAA 49695 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || || | |||||| || | || | | ||||| ||| ||| | || | |||| Sbjct 49694 GATCAGCCTCTGCTGATCAGGAGGGATTCCTTCCTTATCC-TGAATCTTAGCCTTGACAT 49636 Query 42136 TCGCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | |||||| ||| || || |||| |||||||| ||||| || || |||| Sbjct 49635 TATCAATAGTGTCGGAACTC---TCAACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCT 49579 Query 42193 TTACAAAGATTTGCAT 42208 ||||||| |||||||| Sbjct 49578 TTACAAAAATTTGCAT 49563 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 || || || || || ||||| || || || || | || || |||||||||||||| || Sbjct 50209 TCTTTCTGGATGTTATAATCTGCAAGGGTACGACCATCCTCCAGCTGCTTACCAGCAAAA 50150 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 || || | |||||| || | ||| | | |||||||||| ||| | |||| ||| | | Sbjct 50149 ATCAGCCTCTGCTGATCTGGTGGAATACCCTCCTTGTCC-TGAATCTTTGCTTTCACATT 50091 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | || || |||| ||||| || | |||||||| || || ||||| ||||| Sbjct 50090 ATCAATAGTATCTGAGCTC---TCCACCTCCAAAGTGATGGTCTTCCCAGTTAGAGTCTT 50034 Query 42194 TACAAAGATTTGCAT 42208 ||||| || ||||| Sbjct 50033 GACAAAAATCTGCAT 50019 >seq188529 Length=122975 Score = 105 bits (116), Expect = 7e-18 Identities = 165/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| || ||||||||||||| ||| | ||| |||||| || || || |||||||| Sbjct 109255 ACCTCCCCTCAAACGCAACACCAGATGAAGTGTCGACTCCTTCTGTATGTTATAATCAGC 109196 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || |||| | || || || ||||| || || ||||| | |||||||||||| | || Sbjct 109195 AAGTGTCCTTCCATCTTCAAGTTGCTTCCCTGCAAATATCAATCGCTGCTGGTCAGGGGG 109136 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATT 42156 | | ||||||| | ||| |||| | || | | | | ||||| ||| | Sbjct 109135 AATTCCTTCCTTGT-CTTGAATTTTGGCCTTCACGTTATCAATTGTGTCTGAACTC---T 109080 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || |||| || |||||||| || || || ||||||||||| || ||||| Sbjct 109079 CAACCTCGAGAGTAATGGTTTTTCCAGTGAGTGTCTTTACAAATATCTGCAT 109028 Score = 93.3 bits (102), Expect = 5e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 |||||||| ||||||||||| || || || ||| | || || |||||||||||||| ||| Sbjct 109446 TCCTTTTGGATATTGTAATCTGCAAGGGTGCGCCCATCCTCCAGCTGCTTACCAGCAAAT 109387 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| | |||||| || | ||| | | || || ||| ||| |||| | | ||| Sbjct 109386 ATGAGCCTCTGCTGATCTGGTGGGATCCCTTCTTTATCC-TGAATTTTGGCCTTCACGTT 109328 Query 42138 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | | ||||| |||| ||||| || | |||||||| || || || | || || Sbjct 109327 GTCAATAGTGTCAGAGCTC---TCCACTTCCAAAGTGATGGTCTTTCCTGTCAAAGTTTT 109271 Query 42194 TACAAAGATTTGCAT 42208 ||||| || ||||| Sbjct 109270 GACAAAAATCTGCAT 109256 >seq196472 Length=12654 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || || |||||||||||||| || | || |||| ||||| ||||| || Sbjct 8118 TCCTTCTGGATGTTATAATCAGCCAGAGTTCGTCCATCTTCTAATTGCTTCCCAGCAAAA 8059 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || | |||||| || | ||| | | |||||||| | ||| |||| | | | | | Sbjct 8058 ATCAGCCTCTGCTGATCCGGTGGGATACCCTCCTTGT-CTTGAATTTTAGCCTTAACATT 8000 Query 42138 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | | |||||| |||| || || || | |||||| ||||| || |||| ||||| Sbjct 7999 GTCTATCGTGTCCGAGCTC---TCAACTTCCAACGTGATTGTTTTTCCAGTTAAGGTCTT 7943 Query 42194 TACAAAGATTTGCATT 42209 ||||| ||||||||| Sbjct 7942 AACAAAAATTTGCATT 7927 Score = 100 bits (110), Expect = 3e-16 Identities = 153/217 (71%), Gaps = 6/217 (3%) Strand=Plus/Minus Query 41996 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 42055 |||||| | ||| | ||| |||||| || ||||||||||||||||| |||| | || Sbjct 8596 CAACACAAGATGGAGTGTAGACTCCTTCTGGATATTGTAATCAGCCAGGGTCCTACCATC 8537 Query 42056 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115 || | |||||| ||||| || ||||| | ||||||||| | ||| | | || || || Sbjct 8536 CTCCAACTGCTTTCCAGCAAAGATGAGCCTCTGCTGGTCCGGTGGTATACCTTCTTTATC 8477 Query 42116 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGAT 42172 | || || || | | | | |||||| |||| || || || | ||||| Sbjct 8476 CTGTATCTTCGCCTTCACATTGTCAATCGTGTCTGAGCTC---TCAACTTCCAATGTGAT 8420 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 |||||| ||||||| || || || |||||||||||| Sbjct 8419 GGTTTTTCCCGTTAAGGTTTTAACGAAGATTTGCATT 8383 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/197 (71%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||||||||| ||||| |||||||| ||| | || || | ||||| ||||| || Sbjct 7891 CTCCTTTTGAATATTATAATCTGCCAGAGTGCGCCCATCTTCCAATTGCTTCCCAGCAAA 7832 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG- 42135 || || | || ||||| | ||| | | ||||| | | ||| |||| | || | || Sbjct 7831 AATCAGCCTTTGTTGGTCCGGTGGAATACCTTCCTTAT-CTTGAATTTTCGCTTTAACGT 7773 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| |||| || || || | ||||| ||||| || || | |||| Sbjct 7772 TATCAATAGTGTCCGTGCTC---TCAACTTCCAATGTGATTGTTTTTCCAGTCAATGTCT 7716 Query 42193 TTACAAAGATTTGCATT 42209 | ||||| ||||||||| Sbjct 7715 TAACAAATATTTGCATT 7699 Score = 82.4 bits (90), Expect = 8e-11 Identities = 136/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||||||||| |||||||| || |||||||| | || || || || || || || || Sbjct 7663 CTCCTTTTGAATGTTGTAATCCGCAAGAGTCCGTCCATCCTCGAGTTGTTTTCCTGCAAA 7604 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | || || || || | ||| | | || |||||| |||||| ||| | | Sbjct 7603 GATCAAACGTTGTTGATCTGGTGGAATACCTTCTTTGTCCTGGATTTTCGATTTAACATT 7544 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | |||||| ||| || || |||| || || || ||||| || || ||||| Sbjct 7543 GTCGATCGTGTCTGAACTC---TCAACTTCGAGAGTTATAGTCTTGCCAGTAAGAGTCTT 7487 Query 42194 TACAAAGATTTGCAT 42208 ||||||||| ||||| Sbjct 7486 TACAAAGATCTGCAT 7472 >seq72314 Length=63918 Score = 93.3 bits (102), Expect = 5e-14 Identities = 141/197 (72%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||||||||| || || ||||| ||||||| | | || || | || || || || || Sbjct 55649 CTCCTTTTGAATGTTATAGTCAGCAAGAGTCCTCCCATCTTCCAATTGTTTCCCTGCAAA 55590 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || | |||||| || | ||| | || ||||| | | ||| |||| | | | | | Sbjct 55589 AATCAGCCTCTGCTGATCCGGTGGAATGCCTTCCTTAT-CTTGAATTTTGGCCTTAACAT 55531 Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | |||||| |||| || || || | |||||| ||||| || |||| |||| Sbjct 55530 TGTCAATCGTGTCCGAGCTC---TCAACTTCCAACGTGATTGTTTTTCCAGTTAAGGTCT 55474 Query 42193 TTACAAAGATTTGCATT 42209 | ||||||||||||||| Sbjct 55473 TAACAAAGATTTGCATT 55457 >seq146937 Length=209544 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||||||||| || || | |||| || || ||||| || ||||| Sbjct 83358 TCCTTCTGGATGTTGTAATCAGCTAGGGTTCTGCCGTCTTCGAGTTGCTTTCCGGCGAAA 83299 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | | |||||||| | ||| | | |||||||||| ||| | || | | | ||| Sbjct 83298 ATCAACCTTTGCTGGTCTGGTGGGATTCCCTCCTTGTCC-TGAATCTTAGCCTTAACGTT 83240 Query 42138 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | |||||| ||| || || | ||||| ||||| || ||||| || || || Sbjct 83239 GTCGATAGTGTCGGAGCTTTCGACTTCAAGGGTGATTGTTTTCCCGGTTAGGGTTTTAAC 83180 Query 42197 AAAGATTTGCAT 42208 |||||||||||| Sbjct 83179 AAAGATTTGCAT 83168 Score = 86.0 bits (94), Expect = 7e-12 Identities = 154/221 (70%), Gaps = 8/221 (4%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||| | ||||| || |||||| || || ||||||||||| || || || | Sbjct 83839 ACGAAGCACAAGGTGCAAAGTTGACTCCTTCTGGATGTTGTAATCAGCAAGGGTTCGGCC 83780 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || | |||||||||||| || || || | ||||| || | ||| | | |||||| Sbjct 83779 ATCTTCCAACTGCTTACCAGCAAAGATCAGCCTTTGCTGATCTGGTGGGATACCCTCCTT 83720 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 42168 ||| || | || | | | ||| | | | ||||| ||| |||||| || | | Sbjct 83719 ATCC-TGGATCTTCGCCTTAACGTTGTCGATAGTGTCAGAGCT---TTCCACCTCAAGAG 83664 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 |||||||||| || || | ||||| ||||| || |||||| Sbjct 83663 TGATGGTTTTCCCGGTCAAAGTCTTGACAAAAATCTGCATT 83623 >seq157592 Length=32097 Score = 89.7 bits (98), Expect = 6e-13 Identities = 139/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||||||||| || || || | || || |||||||| ||||||||| Sbjct 24461 TCCTTCTGGATGTTGTAATCAGCTAGGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAT 24520 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 || | | ||||||||| | || | || |||||| ||| ||| |||| | |||| | Sbjct 24521 ATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTATCC-TGAATTTTGGCCTTGACATT 24579 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | ||||| ||| || || || | |||||||| ||||| || || || || Sbjct 24580 GTCGATGGTGTCAGAACTC---TCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTTTT 24636 Query 42194 TACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 24637 GACGAAGATCTGCAT 24651 >seq232054 Length=109336 Score = 86.0 bits (94), Expect = 7e-12 Identities = 138/196 (70%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| ||||| || || || | || || ||||||||||| ||||| Sbjct 62189 CTCCTTCTGGATGTTGTAGTCAGCTAGTGTTCGGCCATCCTCAAGCTGCTTACCTGCGAA 62130 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | ||||||||||| | ||| | || ||||||||| ||| | || | | | | | Sbjct 62129 AATCAACCGCTGCTGGTCCGGTGGAATGCCTTCCTTGTCC-TGAATCTTAGCCTTAACAT 62071 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| || || || || | || || || || ||||| || ||||| | Sbjct 62070 TGTCAATGGTGTCCGATGACTCTACCTCTAAGGTAATAGTCTTACCCGTCAGGGTCTTCA 62011 Query 42196 CAAAGATTTGCATTTT 42211 | || || ||||| || Sbjct 62010 CGAATATCTGCATCTT 61995 >seq179153 Length=7583 Score = 86.0 bits (94), Expect = 7e-12 Identities = 161/233 (69%), Gaps = 9/233 (4%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| | | ||||||||| | ||| | ||| ||||| || |||||||||||||| Sbjct 4527 ACCTCCGCGAAGACGCAACACAAGATGGAGAGTGGATTCCTTCTGGATATTGTAATCAGC 4586 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || || || || || ||||| || || | | || || || | || Sbjct 4587 AAGTGTTCGACCATCCTCGAGTTGTTTTCCAGCAAAAATTAACCTTTGTTGATCTGGAGG 4646 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGC--GTCGCCACCGTGTC---GCTCGAT 42155 | | ||||||| | ||| ||||||||| | | | | | ||||| |||| Sbjct 4647 AATTCCTTCCTTGT-CTTGAATTTTTGTTTTAACATTTATCAATGGTGTCCGAGCTC--- 4702 Query 42156 TCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || |||| || ||||| || || || || ||||| |||||||||||||| Sbjct 4703 TCAACCTCGAGTGTAATGGTCTTTCCTGTGAGTGTCTTAACAAAGATTTGCAT 4755 >seq58802 Length=2471 Score = 82.4 bits (90), Expect = 8e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| || |||||||| |||||||| | || ||||||||| || || || || || Sbjct 1922 CCTCCCCTCAAACGCAAGACCAAATGGAGAGTCGACTCCTTTTGGATGTTATAGTCCGCA 1863 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 42094 | ||||| |||| || ||||| |||||||| || || | ||||||||||| Sbjct 1862 ATAGTCCTACCGTCCTCCAGCTGTTTACCAGCAAAAATCAAACGCTGCTGGTC 1810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541488656153120