Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20sylvestris_20[refseq_20GCF_5F000393655.1_202013-05-16]
253,918 sequences; 2,221,987,173 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq224189 131 2e-25
seq24881 118 1e-21
seq140002 109 6e-19
seq242921 105 7e-18
seq188529 105 7e-18
seq196472 100 3e-16
seq72314 93.3 5e-14
seq146937 91.5 2e-13
seq157592 89.7 6e-13
seq232054 86.0 7e-12
seq179153 86.0 7e-12
seq58802 82.4 8e-11
>seq224189
Length=50442
Score = 131 bits (144), Expect = 2e-25
Identities = 163/221 (74%), Gaps = 2/221 (1%)
Strand=Plus/Plus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | ||||||||| | ||| |||||| || || ||||||||||| ||||| || |
Sbjct 16412 ACGGAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAATCAGCTAGAGTTCGACC 16471
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || ||||| || || ||||| ||||| ||||||||||| | ||| | || |||||
Sbjct 16472 ATCCTCGAGCTGTTTTCCGGCGAAAATGAGCCGCTGCTGGTCCGGTGGGATGCCTTCCTT 16531
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171
|||| ||| ||| || | ||| | | | |||||| ||||| || || | ||||
Sbjct 16532 GTCCTGGATCTTTGCCTTCA-CGTTGTCGATTGTGTCGGAGGATTCGACCTCAAGGGTGA 16590
Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTC 42212
|||| || ||||| || || || || ||||| ||||| |||
Sbjct 16591 TGGTCTTACCCGTCAGGGTTTTCACGAAGATCTGCATCTTC 16631
>seq24881
Length=242481
Score = 118 bits (130), Expect = 1e-21
Identities = 158/220 (72%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | ||||||||| | ||| |||||| | || ||||||||||| ||||| || |
Sbjct 141199 ACGGAGCACCAAATGGAGAGTGGACTCCTTCTAGATGTTGTAATCAGCTAGAGTTCGACC 141140
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || ||||| || || ||||| ||||| ||||||||||| | ||| | || |||||
Sbjct 141139 ATCCTCAAGCTGTTTTCCGGCGAAAATGAGCCGCTGCTGGTCCGATGGGATGCCTTCCTT 141080
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172
|||| ||| ||| || | | | | |||||| ||||| || || | || ||
Sbjct 141079 GTCCTGGATCTTTGCCTTCACGTTATCAATTGTGTCGGAGGATTCGACCTCAAGGGTAAT 141020
Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTC 42212
||| || ||||| || || || || ||||| ||||| |||
Sbjct 141019 GGTCTTACCCGTCAGGGTTTTCACGAAGATCTGCATCTTC 140980
>seq140002
Length=100703
Score = 109 bits (120), Expect = 6e-19
Identities = 165/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|||||||| || || | ||||||||| | |||| ||| || || || |||||||||||
Sbjct 56243 CCTCCTCTCAAGCGGAGCACCAAATGGAGTGTGGACTCTTTCTGGATGTTGTAATCAGCA 56184
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
||||||| | | || || |||||||| ||||| || || | | ||||||||| | |||
Sbjct 56183 AGAGTCCTCCCATCCTCAAGCTGCTTCCCAGCAAAAATTAACCTCTGCTGGTCAGGTGGG 56124
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 42157
| | ||||| | | ||| |||| | |||| | | | ||||| ||| ||
Sbjct 56123 ATCCCTTCCTTAT-CTTGAATTTTAGCCTTGACATTATCGATGGTGTCAGAACTC---TC 56068
Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || | ||||| ||||| || || || ||||| |||||||| |||||
Sbjct 56067 AACCTCAAGGGTGATAGTTTTCCCTGTCAGTGTCTTCACAAAGATCTGCAT 56017
Score = 87.8 bits (96), Expect = 2e-12
Identities = 161/232 (69%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| || || | |||| ||||||||| | || ||||| || || |||||||||||
Sbjct 56016 ACCACCCCTAAGGCGCAGCACCAAATGGAGGGTTGATTCCTTCTGGATGTTGTAATCAGC 55957
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| |||| | || || |||||||| ||||| || || || | ||||||||| | |||
Sbjct 55956 TAGTGTCCTTCCATCCTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCAGGTGG 55897
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156
| | ||||| | | ||| |||||| | | | | | | | ||||| |||| |
Sbjct 55896 AATCCCTTCCTTAT-CTTGAATTTTTGCCTTAACATTGTCGATGGTGTCCGAGCTC---T 55841
Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || || | || || ||||| || || | || || ||||||||||||||
Sbjct 55840 CAACTTCAAGAGTAATAGTTTTCCCGGTCAAGGTTTTCACAAAGATTTGCAT 55789
>seq242921
Length=127737
Score = 105 bits (116), Expect = 7e-18
Identities = 141/195 (72%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
||||||||| || ||||| || || ||||| || | || ||||||||||| ||||| ||
Sbjct 49070 CTCCTTTTGGATGTTGTAGTCGGCAAGAGTGCGGCCATCCTCTAGCTGCTTTCCAGCAAA 49011
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| | | |||||| |||| || | | ||||||||| ||| || |||| |
Sbjct 49010 GATCAACCTCTGCTGATCGGGAGGGATTCCTTCCTTGTCCTGGATCTTAGCCTTGACATT 48951
Query 42137 CGCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193
| | |||||| ||| || || |||| || |||||||| || || ||||||||
Sbjct 48950 ATCAATAGTGTCGGAACTC---TCAACCTCGAGAGTAATGGTTTTTCCGGTGAGCGTCTT 48894
Query 42194 TACAAAGATTTGCAT 42208
|||||||||||||||
Sbjct 48893 TACAAAGATTTGCAT 48879
Score = 102 bits (112), Expect = 9e-17
Identities = 94/119 (79%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
||||| || | ||| | ||||||||||| |||| |||||| || ||||| ||||||||
Sbjct 50017 CCTCCCCTCAGACGGAGCACCAAATGCAGTGTGGACTCCTTCTGGATATTATAATCAGCA 49958
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| |||| | | || || |||||||||||||| || || | ||||||||| || | |||
Sbjct 49957 AGGGTCCTCCCATCCTCAAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATCCGGTGG 49899
Score = 100 bits (110), Expect = 3e-16
Identities = 142/196 (72%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| ||||| ||||| ||||| ||||| || | || ||||||||||| ||||| ||
Sbjct 49754 CTCCTTCTGAATGTTGTAGTCAGCAAGAGTGCGGCCATCCTCTAGCTGCTTTCCAGCAAA 49695
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135
|| || | |||||| || | || | | ||||| ||| ||| | || | ||||
Sbjct 49694 GATCAGCCTCTGCTGATCAGGAGGGATTCCTTCCTTATCC-TGAATCTTAGCCTTGACAT 49636
Query 42136 TCGCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192
| | | |||||| ||| || || |||| |||||||| ||||| || || ||||
Sbjct 49635 TATCAATAGTGTCGGAACTC---TCAACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCT 49579
Query 42193 TTACAAAGATTTGCAT 42208
||||||| ||||||||
Sbjct 49578 TTACAAAAATTTGCAT 49563
Score = 84.2 bits (92), Expect = 2e-11
Identities = 138/195 (71%), Gaps = 8/195 (4%)
Strand=Plus/Minus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
|| || || || || ||||| || || || || | || || |||||||||||||| ||
Sbjct 50209 TCTTTCTGGATGTTATAATCTGCAAGGGTACGACCATCCTCCAGCTGCTTACCAGCAAAA 50150
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136
|| || | |||||| || | ||| | | |||||||||| ||| | |||| ||| | |
Sbjct 50149 ATCAGCCTCTGCTGATCTGGTGGAATACCCTCCTTGTCC-TGAATCTTTGCTTTCACATT 50091
Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193
| | || || |||| ||||| || | |||||||| || || ||||| |||||
Sbjct 50090 ATCAATAGTATCTGAGCTC---TCCACCTCCAAAGTGATGGTCTTCCCAGTTAGAGTCTT 50034
Query 42194 TACAAAGATTTGCAT 42208
||||| || |||||
Sbjct 50033 GACAAAAATCTGCAT 50019
>seq188529
Length=122975
Score = 105 bits (116), Expect = 7e-18
Identities = 165/232 (71%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
|||||| || ||||||||||||| ||| | ||| |||||| || || || ||||||||
Sbjct 109255 ACCTCCCCTCAAACGCAACACCAGATGAAGTGTCGACTCCTTCTGTATGTTATAATCAGC 109196
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| |||| | || || || ||||| || || ||||| | |||||||||||| | ||
Sbjct 109195 AAGTGTCCTTCCATCTTCAAGTTGCTTCCCTGCAAATATCAATCGCTGCTGGTCAGGGGG 109136
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATT 42156
| | ||||||| | ||| |||| | || | | | | ||||| ||| |
Sbjct 109135 AATTCCTTCCTTGT-CTTGAATTTTGGCCTTCACGTTATCAATTGTGTCTGAACTC---T 109080
Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || |||| || |||||||| || || || ||||||||||| || |||||
Sbjct 109079 CAACCTCGAGAGTAATGGTTTTTCCAGTGAGTGTCTTTACAAATATCTGCAT 109028
Score = 93.3 bits (102), Expect = 5e-14
Identities = 140/195 (72%), Gaps = 8/195 (4%)
Strand=Plus/Minus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
|||||||| ||||||||||| || || || ||| | || || |||||||||||||| |||
Sbjct 109446 TCCTTTTGGATATTGTAATCTGCAAGGGTGCGCCCATCCTCCAGCTGCTTACCAGCAAAT 109387
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
||||| | |||||| || | ||| | | || || ||| ||| |||| | | |||
Sbjct 109386 ATGAGCCTCTGCTGATCTGGTGGGATCCCTTCTTTATCC-TGAATTTTGGCCTTCACGTT 109328
Query 42138 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193
| | | ||||| |||| ||||| || | |||||||| || || || | || ||
Sbjct 109327 GTCAATAGTGTCAGAGCTC---TCCACTTCCAAAGTGATGGTCTTTCCTGTCAAAGTTTT 109271
Query 42194 TACAAAGATTTGCAT 42208
||||| || |||||
Sbjct 109270 GACAAAAATCTGCAT 109256
>seq196472
Length=12654
Score = 100 bits (110), Expect = 3e-16
Identities = 142/196 (72%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| || || || |||||||||||||| || | || |||| ||||| ||||| ||
Sbjct 8118 TCCTTCTGGATGTTATAATCAGCCAGAGTTCGTCCATCTTCTAATTGCTTCCCAGCAAAA 8059
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| || | |||||| || | ||| | | |||||||| | ||| |||| | | | | |
Sbjct 8058 ATCAGCCTCTGCTGATCCGGTGGGATACCCTCCTTGT-CTTGAATTTTAGCCTTAACATT 8000
Query 42138 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193
| | | |||||| |||| || || || | |||||| ||||| || |||| |||||
Sbjct 7999 GTCTATCGTGTCCGAGCTC---TCAACTTCCAACGTGATTGTTTTTCCAGTTAAGGTCTT 7943
Query 42194 TACAAAGATTTGCATT 42209
||||| |||||||||
Sbjct 7942 AACAAAAATTTGCATT 7927
Score = 100 bits (110), Expect = 3e-16
Identities = 153/217 (71%), Gaps = 6/217 (3%)
Strand=Plus/Minus
Query 41996 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 42055
|||||| | ||| | ||| |||||| || ||||||||||||||||| |||| | ||
Sbjct 8596 CAACACAAGATGGAGTGTAGACTCCTTCTGGATATTGTAATCAGCCAGGGTCCTACCATC 8537
Query 42056 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115
|| | |||||| ||||| || ||||| | ||||||||| | ||| | | || || ||
Sbjct 8536 CTCCAACTGCTTTCCAGCAAAGATGAGCCTCTGCTGGTCCGGTGGTATACCTTCTTTATC 8477
Query 42116 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGAT 42172
| || || || | | | | |||||| |||| || || || | |||||
Sbjct 8476 CTGTATCTTCGCCTTCACATTGTCAATCGTGTCTGAGCTC---TCAACTTCCAATGTGAT 8420
Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
|||||| ||||||| || || || ||||||||||||
Sbjct 8419 GGTTTTTCCCGTTAAGGTTTTAACGAAGATTTGCATT 8383
Score = 87.8 bits (96), Expect = 2e-12
Identities = 140/197 (71%), Gaps = 8/197 (4%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
||||||||||||||| ||||| |||||||| ||| | || || | ||||| ||||| ||
Sbjct 7891 CTCCTTTTGAATATTATAATCTGCCAGAGTGCGCCCATCTTCCAATTGCTTCCCAGCAAA 7832
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG- 42135
|| || | || ||||| | ||| | | ||||| | | ||| |||| | || | ||
Sbjct 7831 AATCAGCCTTTGTTGGTCCGGTGGAATACCTTCCTTAT-CTTGAATTTTCGCTTTAACGT 7773
Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192
| | | ||||| |||| || || || | ||||| ||||| || || | ||||
Sbjct 7772 TATCAATAGTGTCCGTGCTC---TCAACTTCCAATGTGATTGTTTTTCCAGTCAATGTCT 7716
Query 42193 TTACAAAGATTTGCATT 42209
| ||||| |||||||||
Sbjct 7715 TAACAAATATTTGCATT 7699
Score = 82.4 bits (90), Expect = 8e-11
Identities = 136/195 (70%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||||||||| |||||||| || |||||||| | || || || || || || || ||
Sbjct 7663 CTCCTTTTGAATGTTGTAATCCGCAAGAGTCCGTCCATCCTCGAGTTGTTTTCCTGCAAA 7604
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| | || || || || | ||| | | || |||||| |||||| ||| | |
Sbjct 7603 GATCAAACGTTGTTGATCTGGTGGAATACCTTCTTTGTCCTGGATTTTCGATTTAACATT 7544
Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193
| | |||||| ||| || || |||| || || || ||||| || || |||||
Sbjct 7543 GTCGATCGTGTCTGAACTC---TCAACTTCGAGAGTTATAGTCTTGCCAGTAAGAGTCTT 7487
Query 42194 TACAAAGATTTGCAT 42208
||||||||| |||||
Sbjct 7486 TACAAAGATCTGCAT 7472
>seq72314
Length=63918
Score = 93.3 bits (102), Expect = 5e-14
Identities = 141/197 (72%), Gaps = 8/197 (4%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||||||||| || || ||||| ||||||| | | || || | || || || || ||
Sbjct 55649 CTCCTTTTGAATGTTATAGTCAGCAAGAGTCCTCCCATCTTCCAATTGTTTCCCTGCAAA 55590
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| || | |||||| || | ||| | || ||||| | | ||| |||| | | | | |
Sbjct 55589 AATCAGCCTCTGCTGATCCGGTGGAATGCCTTCCTTAT-CTTGAATTTTGGCCTTAACAT 55531
Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192
| | | |||||| |||| || || || | |||||| ||||| || |||| ||||
Sbjct 55530 TGTCAATCGTGTCCGAGCTC---TCAACTTCCAACGTGATTGTTTTTCCAGTTAAGGTCT 55474
Query 42193 TTACAAAGATTTGCATT 42209
| |||||||||||||||
Sbjct 55473 TAACAAAGATTTGCATT 55457
>seq146937
Length=209544
Score = 91.5 bits (100), Expect = 2e-13
Identities = 137/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| || || ||||||||||| || || | |||| || || ||||| || |||||
Sbjct 83358 TCCTTCTGGATGTTGTAATCAGCTAGGGTTCTGCCGTCTTCGAGTTGCTTTCCGGCGAAA 83299
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| | | |||||||| | ||| | | |||||||||| ||| | || | | | |||
Sbjct 83298 ATCAACCTTTGCTGGTCTGGTGGGATTCCCTCCTTGTCC-TGAATCTTAGCCTTAACGTT 83240
Query 42138 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | | |||||| ||| || || | ||||| ||||| || ||||| || || ||
Sbjct 83239 GTCGATAGTGTCGGAGCTTTCGACTTCAAGGGTGATTGTTTTCCCGGTTAGGGTTTTAAC 83180
Query 42197 AAAGATTTGCAT 42208
||||||||||||
Sbjct 83179 AAAGATTTGCAT 83168
Score = 86.0 bits (94), Expect = 7e-12
Identities = 154/221 (70%), Gaps = 8/221 (4%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | ||| | ||||| || |||||| || || ||||||||||| || || || |
Sbjct 83839 ACGAAGCACAAGGTGCAAAGTTGACTCCTTCTGGATGTTGTAATCAGCAAGGGTTCGGCC 83780
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || | |||||||||||| || || || | ||||| || | ||| | | ||||||
Sbjct 83779 ATCTTCCAACTGCTTACCAGCAAAGATCAGCCTTTGCTGATCTGGTGGGATACCCTCCTT 83720
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 42168
||| || | || | | | ||| | | | ||||| ||| |||||| || | |
Sbjct 83719 ATCC-TGGATCTTCGCCTTAACGTTGTCGATAGTGTCAGAGCT---TTCCACCTCAAGAG 83664
Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
|||||||||| || || | ||||| ||||| || ||||||
Sbjct 83663 TGATGGTTTTCCCGGTCAAAGTCTTGACAAAAATCTGCATT 83623
>seq157592
Length=32097
Score = 89.7 bits (98), Expect = 6e-13
Identities = 139/195 (71%), Gaps = 8/195 (4%)
Strand=Plus/Plus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| || || ||||||||||| || || || | || || |||||||| |||||||||
Sbjct 24461 TCCTTCTGGATGTTGTAATCAGCTAGGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAT 24520
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136
|| | | ||||||||| | || | || |||||| ||| ||| |||| | |||| |
Sbjct 24521 ATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTATCC-TGAATTTTGGCCTTGACATT 24579
Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193
| | ||||| ||| || || || | |||||||| ||||| || || || ||
Sbjct 24580 GTCGATGGTGTCAGAACTC---TCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTTTT 24636
Query 42194 TACAAAGATTTGCAT 42208
|| ||||| |||||
Sbjct 24637 GACGAAGATCTGCAT 24651
>seq232054
Length=109336
Score = 86.0 bits (94), Expect = 7e-12
Identities = 138/196 (70%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| ||||| || || || | || || ||||||||||| |||||
Sbjct 62189 CTCCTTCTGGATGTTGTAGTCAGCTAGTGTTCGGCCATCCTCAAGCTGCTTACCTGCGAA 62130
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| | ||||||||||| | ||| | || ||||||||| ||| | || | | | | |
Sbjct 62129 AATCAACCGCTGCTGGTCCGGTGGAATGCCTTCCTTGTCC-TGAATCTTAGCCTTAACAT 62071
Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195
| | | ||||| || || || || | || || || || ||||| || ||||| |
Sbjct 62070 TGTCAATGGTGTCCGATGACTCTACCTCTAAGGTAATAGTCTTACCCGTCAGGGTCTTCA 62011
Query 42196 CAAAGATTTGCATTTT 42211
| || || ||||| ||
Sbjct 62010 CGAATATCTGCATCTT 61995
>seq179153
Length=7583
Score = 86.0 bits (94), Expect = 7e-12
Identities = 161/233 (69%), Gaps = 9/233 (4%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
|||||| | | ||||||||| | ||| | ||| ||||| || ||||||||||||||
Sbjct 4527 ACCTCCGCGAAGACGCAACACAAGATGGAGAGTGGATTCCTTCTGGATATTGTAATCAGC 4586
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || || | || || || || || ||||| || || | | || || || | ||
Sbjct 4587 AAGTGTTCGACCATCCTCGAGTTGTTTTCCAGCAAAAATTAACCTTTGTTGATCTGGAGG 4646
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGC--GTCGCCACCGTGTC---GCTCGAT 42155
| | ||||||| | ||| ||||||||| | | | | | ||||| ||||
Sbjct 4647 AATTCCTTCCTTGT-CTTGAATTTTTGTTTTAACATTTATCAATGGTGTCCGAGCTC--- 4702
Query 42156 TCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || |||| || ||||| || || || || ||||| ||||||||||||||
Sbjct 4703 TCAACCTCGAGTGTAATGGTCTTTCCTGTGAGTGTCTTAACAAAGATTTGCAT 4755
>seq58802
Length=2471
Score = 82.4 bits (90), Expect = 8e-11
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
||||| || |||||||| |||||||| | || ||||||||| || || || || ||
Sbjct 1922 CCTCCCCTCAAACGCAAGACCAAATGGAGAGTCGACTCCTTTTGGATGTTATAGTCCGCA 1863
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 42094
| ||||| |||| || ||||| |||||||| || || | |||||||||||
Sbjct 1862 ATAGTCCTACCGTCCTCCAGCTGTTTACCAGCAAAAATCAAACGCTGCTGGTC 1810
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 541488656153120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |