Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20sylvestris_20[refseq_20GCF_5F000393655.1_202013-05-16] 253,918 sequences; 2,221,987,173 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq96764 86.0 7e-12 seq65454 86.0 7e-12 >seq96764 Length=468 Score = 86.0 bits (94), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674 |||||||||||||| | |||||||||| ||||||||||||| |||||| |||||||||| Sbjct 206 GCGGGGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGCCACGGGTTCAAAT 147 Query 92675 CC 92676 || Sbjct 146 CC 145 >seq65454 Length=4641 Score = 86.0 bits (94), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674 |||||||||||||| | |||||||||| ||||||||||||| |||||| |||||||||| Sbjct 3944 GCGGGGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGCCACGGGTTCAAAT 4003 Query 92675 CC 92676 || Sbjct 4004 CC 4005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524926989843360