Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20sylvestris_20[refseq_20GCF_5F000393655.1_202013-05-16]
253,918 sequences; 2,221,987,173 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq179153 129 5e-25
seq188529 123 2e-23
seq140002 118 1e-21
seq196472 111 1e-19
seq72314 104 2e-17
seq222647 100 3e-16
seq192764 100 3e-16
seq157592 96.9 3e-15
seq224189 95.1 1e-14
seq146937 93.3 4e-14
seq184254 89.7 5e-13
seq242921 87.8 2e-12
seq232054 86.0 6e-12
>seq179153
Length=7583
Score = 129 bits (142), Expect = 5e-25
Identities = 168/230 (73%), Gaps = 3/230 (1%)
Strand=Plus/Plus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|||||||| || | |||||| ||||| || || |||||||| |||||||| |||||
Sbjct 4528 CCTCCGCGAAGACGCAACACAAGATGGAGAGTGGATTCCTTCTGGATATTGTAATCAGCA 4587
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| ||| | ||| || | ||||||||| || | || || | ||| || || || |||
Sbjct 4588 AGTGTTCGACCATCCTCGAGTTGTTTTCCAGCAAAAATTAACCTTTGTTGATCTGGAGGA 4647
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT--TCTACGGTGTCGGAAGACTCGA 45291
|| ||||| || ||||||| ||||||||| | | | || | |||||| || ||| |
Sbjct 4648 ATTCCTTCCTTGTCTTGAA-TTTTTGTTTTAACATTTATCAATGGTGTCCGAGCTCTCAA 4706
Query 45292 CTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
| ||||| |||| || || || || || || || ||||| |||||||||
Sbjct 4707 CCTCGAGTGTAATGGTCTTTCCTGTGAGTGTCTTAACAAAGATTTGCATC 4756
>seq188529
Length=122975
Score = 123 bits (136), Expect = 2e-23
Identities = 158/215 (73%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATC 45187
|||||| ||||| || || || ||||| || || |||||||| | || | |||
Sbjct 109240 CAACACCAGATGAAGTGTCGACTCCTTCTGTATGTTATAATCAGCAAGTGTCCTTCCATC 109181
Query 45188 GTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATC 45247
|| | ||| || ||||| |||||||||| |||||||| || ||||| ||||| || ||
Sbjct 109180 TTCAAGTTGCTTCCCTGCAAATATCAATCGCTGCTGGTCAGGGGGAATTCCTTCCTTGTC 109121
Query 45248 TTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCG 45306
||||||||| || | || | || | ||||| ||| ||| || |||||||||| |
Sbjct 109120 TTGAATTTTGGCCTTCA-CGTTATCAATTGTGTCTGAACTCTCAACCTCGAGAGTAATGG 109062
Query 45307 TTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|||| || || || || |||||||| || ||||||
Sbjct 109061 TTTTTCCAGTGAGTGTCTTTACAAATATCTGCATC 109027
Score = 86.0 bits (94), Expect = 6e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190
||| || || || || ||||||||||||||||| ||||| | ||| ||| ||
Sbjct 109465 CACAAGGTGGAGTGTGGATTCCTTTTGGATATTGTAATCTGCAAGGGTGCGCCCATCCTC 109406
Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250
|| || || || || |||| | | ||||| || || || || ||||||||||| ||
Sbjct 109405 CAGCTGCTTACCAGCAAATATGAGCCTCTGCTGATCTGGTGGGATCCCTTCTTTATCCTG 109346
Query 45251 AATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309
|||||| || | || | || | ||||| || ||| ||||| | ||| | || |
Sbjct 109345 AATTTTGGCCTTCA-CGTTGTCAATAGTGTCAGAGCTCTCCACTTCCAAAGTGATGGTCT 109287
Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| || || | |||||| |||||||| |||||
Sbjct 109286 TTCCTGTCAAAGTTTTGACAAAAATCTGCAT 109256
>seq140002
Length=100703
Score = 118 bits (130), Expect = 1e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| || || || || ||||||||||||||||| || ||| | ||| ||| ||
Sbjct 55313 ACAAGGTGGAGGGTAGATTCCTTTTGGATATTGTAGTCGGCAAGAGTTCGGCCATCCTCT 55254
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
|| || ||||| || | ||||| | |||||| ||||| ||||| ||||| ||||||||
Sbjct 55253 AACTGCTTTCCAGCAAAGATCAACCTTTGCTGATCCGGAGGAATTCCTTCCTTATCTTGG 55194
Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311
|| ||| || | || | ||||| ||| ||| || |||||||| | ||||||
Sbjct 55193 ATCTTTGCCTTAACATTGTCGATAGTGTCTGAACTCTCAACCTCGAGAGTGATGGTTTTG 55134
Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || || || |||||||| |||||||||
Sbjct 55133 CCAGTGAGGGTCTTTACAAAGATTTGCATC 55104
Score = 109 bits (120), Expect = 5e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
||||||| ||| ||||| || || |||||||| || ||||| || || | ||| |
Sbjct 55778 AGCCTCAGCACCAGATGGAGAGTGGATTCCTTCTGAATATTGTAGTCAGCAAGGGTACGA 55719
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
||| || | ||| ||||| || | ||||| | ||||| || || ||||||||||||
Sbjct 55718 CCATCCTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGAGGAATGCCTTCT 55659
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTA 45302
||||| || ||||| ||||| || | || || ||| ||| || || || |||
Sbjct 55658 TTATCCTGGATTTTAGCTTTGACATTGTCAATTGTATCAGAACTCTCAACCTCAAGGGTA 55599
Query 45303 ACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| || || || || | |||||||||||| || |||||
Sbjct 55598 ATAGTCTTTCCTGTCAAAGTTTTTACAAAGATCTGCAT 55561
Score = 104 bits (114), Expect = 2e-17
Identities = 153/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC-GCTGACGGTTTTAGAAT 45186
|| ||| | ||| || ||||||||||| ||||| || ||||| ||| | || | ||
Sbjct 56001 CAGCACCAAATGGAGGGTTGATTCCTTCTGGATGTTGTAATCAGCT-AGTGTCCTTCCAT 55943
Query 45187 CGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTAT 45246
| || | || || || || | || | | |||||||| || ||||| ||||| ||||
Sbjct 55942 CCTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCAGGTGGAATCCCTTCCTTAT 55883
Query 45247 CTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCG 45306
||||||||||| || | || | |||||| || ||| ||||| ||||||| |
Sbjct 55882 CTTGAATTTTTGCCTTAACATTGTCGATGGTGTCCGAGCTCTCAACTTCAAGAGTAATAG 55823
Query 45307 TTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||| ||||| | ||||| ||||| ||||||||
Sbjct 55822 TTTTCCCGGTCAAGGTTTTCACAAAGATTTGCAT 55789
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| || || || || || ||||||||||| || || || | ||| | ||| ||
Sbjct 55541 ACAAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCAAGGGTACGACCATCCTCA 55482
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
| ||| ||||| || | ||||| | |||||| ||||| ||||||||||| || || |||
Sbjct 55481 AGTTGCTTTCCAGCAAAGATCAACCTTTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGA 55422
Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311
|| ||| || | || | ||||| || ||| || |||||||| | || ||
Sbjct 55421 ATCTTTGCCTTAACATTATCAATTGTGTCTGAGCTCTCAACCTCGAGAGTGATAGTCTTC 55362
Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| |||| |||||||||||| || |||||
Sbjct 55361 CCTGTTAAAGTTTTTACAAAGATCTGCAT 55333
>seq196472
Length=12654
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || || || | | || || || || ||||| |||||||| || || |||||
Sbjct 7701 ATTCCACCACGTAGACGAAGAACAAGGTGGAGAGTTGACTCCTTTTGAATGTTGTAATCC 7642
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || ||| || | |||||||||||| | ||||| ||||| || || ||
Sbjct 7641 GCAAGAGTCCGTCCATCCTCGAGTTGTTTTCCTGCAAAGATCAAACGTTGTTGATCTGGT 7582
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
||||| |||||||| || || ||||| ||| | || | ||||| ||| |||
Sbjct 7581 GGAATACCTTCTTTGTCCTGGATTTTCGATTTAACATTGTCGATCGTGTCTGAACTCTCA 7522
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
||||||||||| | || ||||| || ||||| |||||||| || ||||||
Sbjct 7521 ACTTCGAGAGTTATAGTCTTGCCAGTAAGAGTCTTTACAAAGATCTGCATC 7471
Score = 105 bits (116), Expect = 6e-18
Identities = 166/233 (71%), Gaps = 6/233 (3%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || || || | | ||||| || |||||||| |||||||| |||||||||||
Sbjct 7929 ATTCCACCACGAAGGCGAAGGACTAGGTGGAGCGTTGACTCCTTTTGAATATTATAATC- 7871
Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228
|| | | | | ||| |||||||| || || || | |||| | ||| |||||||
Sbjct 7870 -TGCCAGAGTGCGCCCATCTTCCAATTGCTTCCCAGCAAAAATCAGCCTTTGTTGGTCCG 7812
Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGAC 45287
| ||||| ||||| |||||||||| |||| | || | || | || | ||||| | |
Sbjct 7811 GTGGAATACCTTCCTTATCTTGAA-TTTTCGCTTTAACGTTATCAATAGTGTCCGTGCTC 7753
Query 45288 TCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| ||||| | || | ||||| || || | || || ||||| ||||||||
Sbjct 7752 TCAACTTCCAATGTGATTGTTTTTCCAGTCAATGTCTTAACAAATATTTGCAT 7700
Score = 100 bits (110), Expect = 3e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
||||||||||| ||||| || || || ||||| |||||||| ||||| | ||| ||
Sbjct 8601 AGCCTCAACACAAGATGGAGTGTAGACTCCTTCTGGATATTGTAATCAGCCAGGGTCCTA 8542
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
||| ||||| || ||||| || | || | | ||||||||||| || || ||||||
Sbjct 8541 CCATCCTCCAACTGCTTTCCAGCAAAGATGAGCCTCTGCTGGTCCGGTGGTATACCTTCT 8482
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTA 45302
||||| || || || || | || | ||||| || ||| ||||| | ||
Sbjct 8481 TTATCCTGTATCTTCGCCTTCACATTGTCAATCGTGTCTGAGCTCTCAACTTCCAATGTG 8422
Query 45303 ACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| || |||| ||||| || || ||||||||
Sbjct 8421 ATGGTTTTTCCCGTTAAGGTTTTAACGAAGATTTGCAT 8384
>seq72314
Length=63918
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || || || | | ||||| || || ||||| |||||||| || ||||| ||
Sbjct 55687 ATTCCACCACGAAGGCGAAGGACTAGGTGGAGTGTTGACTCCTTTTGAATGTTATAGTCA 55628
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || | ||| ||||||||||| ||||| | |||| | ||||| |||||
Sbjct 55627 GCAAGAGTCCTCCCATCTTCCAATTGTTTCCCTGCAAAAATCAGCCTCTGCTGATCCGGT 55568
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
||||||||||| |||||||||||||| || | || | ||||| || |||
Sbjct 55567 GGAATGCCTTCCTTATCTTGAATTTTGGCCTTAACATTGTCAATCGTGTCCGAGCTCTCA 55508
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| | || | ||||| || |||| || || ||||| ||||||||
Sbjct 55507 ACTTCCAACGTGATTGTTTTTCCAGTTAAGGTCTTAACAAAGATTTGCAT 55458
Score = 102 bits (112), Expect = 7e-17
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
||||| | ||||| || || ||||| |||||||| || |||||||| || ||
Sbjct 54763 AGCCTGAGAACTAGGTGGAGGGTTGACTCCTTTTGAATGTTATAATCTGCGAGAGTACGC 54704
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
||| ||||||||||| ||||| | |||| | ||||| |||||||| || || ||
Sbjct 54703 CCATCTTCCAATTGTTTCCCTGCAAAAATCAGCCTCTGCTGATCCGGCGGGATACCCTCC 54644
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTA 45302
|| ||||||||||| || | |||| ||||| || || ||||| || ||
Sbjct 54643 TTGTCTTGAATTTTCGCCTTAACATTATCTATCGTGTCCGAGCTTTCAACTTCCAGTGTG 54584
Query 45303 ACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
| ||||| || |||| ||||| ||||| || ||||||
Sbjct 54583 ATGGTTTTTCCAGTTAAGGTTTTAACAAAGATCTGCATC 54545
Score = 100 bits (110), Expect = 3e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
||||||| ||| ||||| ||||| || ||||| |||||||| || ||| | || ||
Sbjct 55903 AGCCTCAGCACAAGATGGAGCGTAGACTCCTTCTGGATATTGTAGTCGGCCAGTGTCCTA 55844
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
||| ||||| |||||||| || | || | | ||||||||||| ||||| || ||
Sbjct 55843 CCATCCTCCAACTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCCGGTGGAATTCCCTCC 55784
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTA 45302
||||| || || || || | || | ||||| || ||| ||||| || ||
Sbjct 55783 TTATCCTGTATCTTCGCCTTCACATTGTCAATCGTGTCTGAGCTCTCAACTTCCAGTGTG 55724
Query 45303 ACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| || || || |||| |||||| || || ||||||||
Sbjct 55723 ATGGTCTTTCCTGTTAAAGTTTTAACGAAGATTTGCAT 55686
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || ||||| | | || || || || ||||| ||||| || ||||| |||||
Sbjct 55003 ATTCCACCACGGAGACGAAGAACAAGGTGGAGTGTTGACTCCTTCTGAATATTGTAATCC 54944
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| || ||| || | ||||||||||| | ||||| ||||| || || ||
Sbjct 54943 GCGAGAGTCCGTCCATCCTCGAGCTGTTTTCCTGCAAAGATCAAACGTTGTTGATCTGGT 54884
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| || ||||| |||||||| ||||| || | || | ||||| || |||
Sbjct 54883 GGTATACCTTCCTTATCTTGGATTTTGGCCTTAACATTATCAATCGTGTCCGAGCTTTCG 54824
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
||||| | || | ||||| || || | ||||| |||||||||||||||
Sbjct 54823 ACTTCCAATGTGATTGTTTTCCCAGTCAAGGTTTTAACAAAAATTTGCATC 54773
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || | ||||| | || || || || || ||||||||||| |||||||||||
Sbjct 55459 ATTCCACCCCTTAGCCTAAGAACAAGGTGAAGGGTGGATTCCTTTTGAATATTATAATCT 55400
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| || | ||| ||||||||||| ||||| | |||| || |||||||| ||
Sbjct 55399 GCGAGAGTCCTTCCATCTTCCAATTGTTTCCCTGCAAAAATCAGTCTCTGCTGGTCTGGT 55340
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
||||| || || ||||| || || || || | || | ||| || ||| |||
Sbjct 55339 GGAATACCCTCCTTATCCTGTATCTTGGCCTTCACATTGTCAATGGTATCAGAACTCTCC 55280
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | || | ||| || || || | || || ||||| || |||||
Sbjct 55279 ACCTCCAACGTGATCGTCTTCCCCGTCAACGTCTTCACAAAGATCTGCAT 55230
>seq222647
Length=37102
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || ||||| | | ||| ||||| || || || ||||| |||| || ||||||
Sbjct 27456 CCACCACGGAGACGGAGCACGAGATGAAGAGTCGACTCCTTCTGGAGGTTGTAATCGGCT 27515
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| |||| || |||| || ||||| ||| | |||| || ||||| || || |||
Sbjct 27516 AGGGTTCGGTCGTCTTCCAGCTGCTTTCCGGCGAAAATCAGACGCTGCTGATCTGGGGGA 27575
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293
|| ||||| |||||||| || || ||| | || | ||||||||||| || ||
Sbjct 27576 ATCCCTTCCTTATCTTGGATCTTGGCTTTCACATTGTCGATTGTGTCGGAAGATTCAACC 27635
Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || || | ||||| || ||||| ||||| || || || ||||||
Sbjct 27636 TCAAGGGTGATTGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATC 27683
>seq192764
Length=177479
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || ||||| | | ||| ||||| || || || ||||| ||||| || ||||||
Sbjct 143310 CCACCACGGAGACGGAGCACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGCT 143369
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| |||| || || | || ||||| ||| | |||| || ||||| || || |||
Sbjct 143370 AGGGTTCGGCCGTCTTCAAGCTGCTTTCCGGCGAAAATCAGACGCTGCTGATCTGGGGGA 143429
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293
|| ||||| |||||||| || || ||| | || | ||||||||||| || ||
Sbjct 143430 ATCCCTTCCTTATCTTGGATCTTGGCTTTCACATTGTCGATTGTGTCGGAAGATTCAACC 143489
Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || || | ||||| || ||||| ||||| || || || ||||||
Sbjct 143490 TCAAGGGTGATTGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATC 143537
>seq157592
Length=32097
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | || || || || || || ||||| ||||| || ||||||
Sbjct 24650 ATACCACCACGGAGACGGAGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCG 24709
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| ||| ||| || | || || || ||| | ||||| | |||||||| ||
Sbjct 24710 GCGAGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGT 24769
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
||||| || || ||||| |||||||| |||| || | |||||| ||| |||
Sbjct 24770 GGAATTCCCTCCTTATCCTGAATTTTGGCCTTGACATTATCAATGGTGTCAGAACTTTCG 24829
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || || || | ||||||||||| || ||||| || || || ||||||
Sbjct 24830 ACCTCAAGGGTGATTGTTTTGCCGGTGAGGGTTTTGACGAAGATCTGCATC 24880
>seq224189
Length=50442
Score = 95.1 bits (104), Expect = 1e-14
Identities = 162/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC-GCT 45172
|| || ||||| | | ||| | ||| || || || ||||| ||||| || ||||| |||
Sbjct 16401 CCACCACGGAGACGGAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAATCAGCT 16460
Query 45173 GACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGG 45232
| ||| | ||| || | |||||||| ||| | || | || ||||||||||| ||
Sbjct 16461 -AGAGTTCGACCATCCTCGAGCTGTTTTCCGGCGAAAATGAGCCGCTGCTGGTCCGGTGG 16519
Query 45233 AATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGA 45291
|||||||| || || || || ||| || | || | || | |||||||| || ||||
Sbjct 16520 GATGCCTTCCTTGTCCTGGATCTTTGCCTTCA-CGTTGTCGATTGTGTCGGAGGATTCGA 16578
Query 45292 CTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
| || || || | || || || || || ||||| || || || ||||||
Sbjct 16579 CCTCAAGGGTGATGGTCTTACCCGTCAGGGTTTTCACGAAGATCTGCATC 16628
>seq146937
Length=209544
Score = 93.3 bits (102), Expect = 4e-14
Identities = 145/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || |||||||| ||||| || || ||| | |||| || || || | ||
Sbjct 83142 TGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTACCGTCTTCGAGCTGC 83083
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
||||| ||| | ||||| | ||||||||||| || || |||||||| || |||| | ||
Sbjct 83082 TTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATTCCTTCTTTGTCCTGAA-TCTT 83024
Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
| | | || | || | |||||||| || || || || || | ||||| |||||
Sbjct 83023 AGCCTTAACGTTGTCAATAGTGTCGGAGCTTTCAACCTCAAGGGTGATTGTTTTTCCGGT 82964
Query 45317 TAGAGTTTTTACAAAAATTTGCATC 45341
||| ||||| || || || ||||||
Sbjct 82963 TAGGGTTTTCACGAAGATCTGCATC 82939
>seq184254
Length=183585
Score = 89.7 bits (98), Expect = 5e-13
Identities = 103/139 (74%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 45112 TTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGC 45171
||||||| | ||||||||| || || || || |||||||| || || ||||| |||||
Sbjct 180711 TTCCTCCCCTGAGCCTCAAAACGAGGTGAAGAGTTGATTCTTTCTGAATATTGTAATCAG 180652
Query 45172 TGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231
| ||| | ||| ||||| ||||| || || | |||| || ||||| || || |
Sbjct 180651 CCAGGGTCCGACCATCTTCCAACTGTTTCCCAGCAAAAATCAGTCTCTGCTGATCAGGAG 180592
Query 45232 GAATGCCTTCTTTATCTTG 45250
| |||||||||||||| ||
Sbjct 180591 GTATGCCTTCTTTATCCTG 180573
>seq242921
Length=127737
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || ||||| || | | || || || || || || ||||||||||| || || |||
Sbjct 49108 ATGCCACCGCGCAGACGGAGGACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCG 49049
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || ||| || | || ||||| || | ||||| | ||||| || ||
Sbjct 49048 GCAAGAGTGCGGCCATCCTCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCGGGA 48989
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| || ||||| || || || || || |||| || | ||||||||| |||
Sbjct 48988 GGGATTCCTTCCTTGTCCTGGATCTTAGCCTTGACATTATCAATAGTGTCGGAACTCTCA 48929
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| |||||||||| ||||| ||||| || || |||||||| |||||||||
Sbjct 48928 ACCTCGAGAGTAATGGTTTTTCCGGTGAGCGTCTTTACAAAGATTTGCATC 48878
Score = 84.2 bits (92), Expect = 2e-11
Identities = 94/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190
||| | |||||| || || ||||| |||||||||||||| | ||| | ||| ||
Sbjct 50000 CACCAAATGCAGTGTGGACTCCTTCTGGATATTATAATCAGCAAGGGTCCTCCCATCCTC 49941
Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250
| || || || || | |||||||| ||||| ||||| ||||| ||||||||||||||
Sbjct 49940 AAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATCCGGTGGAATCCCTTCTTTATCTTG 49881
Query 45251 AATTTT 45256
|| ||
Sbjct 49880 GATCTT 49875
>seq232054
Length=109336
Score = 86.0 bits (94), Expect = 6e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC-GCT 45172
|| || ||||| | | || ||||| || || || ||||| ||||| || || || |||
Sbjct 62224 CCACCACGGAGGCGAAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCT 62165
Query 45173 GACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGG 45232
| ||| ||| || | || || |||||| | ||||| || ||||||||||| ||
Sbjct 62164 -AGTGTTCGGCCATCCTCAAGCTGCTTACCTGCGAAAATCAACCGCTGCTGGTCCGGTGG 62106
Query 45233 AATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGAC 45292
||||||||| || || ||||| || || | || | |||||| || ||||| ||
Sbjct 62105 AATGCCTTCCTTGTCCTGAATCTTAGCCTTAACATTGTCAATGGTGTCCGATGACTCTAC 62046
Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| | |||| || || || || || || || || || || ||||||
Sbjct 62045 CTCTAAGGTAATAGTCTTACCCGTCAGGGTCTTCACGAATATCTGCATC 61997
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450568553143280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |