Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20sylvestris_20[refseq_20GCF_5F000393655.1_202013-05-16] 253,918 sequences; 2,221,987,173 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq103869 96.9 8e-15 >seq103869 Length=107989 Score = 96.9 bits (106), Expect = 8e-15 Identities = 178/255 (70%), Gaps = 6/255 (2%) Strand=Plus/Minus Query 150307 AGAAGGTAAACTTGATCCACTAATTGGTCGCGAAACTGAACTT-GATGATCTAATTCAGA 150365 || ||| ||||||||||| | |||||| | || ||| || || || |||||| || Sbjct 25158 AGCAGGAAAACTTGATCCTGTGATTGGTAGGGATGAAGAAATTCGAAGAG-TAATTCGGA 25100 Query 150366 TTCTTTCTCGTAAAACCAAAAAGAAT--GGTGCGTTAGTTGGTGAACCAGGTGTTGGTAA 150423 || | || | | || || || ||| ||||| ||| ||||||| || ||||||||||| Sbjct 25099 TTTTATCGAGGAGGACAAAGAATAATCCGGTGC-TTA-TTGGTGAGCCTGGTGTTGGTAA 25042 Query 150424 AACACAAATCGTTGACGGATTAGCACAACGCATCGCTAATGGTGATGTTCCAGATTCTAT 150483 |||| | | ||||| || |||||||| | || | | || ||||| || | | | Sbjct 25041 AACAGCAGTAGTTGAAGGGCTAGCACAAAGGATTGTTCGAGGCGATGTCCCGAGTAATTT 24982 Query 150484 GAAAGATGTTGAAATTCTTTCTTTGAATATGGGTGCATTTACTGCTGGTACTAAGTATCG 150543 | |||||| | || | | ||| | ||||| ||||| | |||||| | || ||| | Sbjct 24981 GGCTGATGTTAGACTTATAGCATTGGACATGGGAGCATTAATTGCTGGAGCAAAATATAG 24922 Query 150544 TGGTGAATTCGAAGA 150558 |||||||| ||||| Sbjct 24921 AGGTGAATTTGAAGA 24907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1143856916179164