Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20sylvestris_20[refseq_20GCF_5F000393655.1_202013-05-16]
253,918 sequences; 2,221,987,173 total letters
Query= NC_019401.1
Length=358663
Score E
Sequences producing significant alignments: (Bits) Value
seq103869 96.9 8e-15
>seq103869
Length=107989
Score = 96.9 bits (106), Expect = 8e-15
Identities = 178/255 (70%), Gaps = 6/255 (2%)
Strand=Plus/Minus
Query 150307 AGAAGGTAAACTTGATCCACTAATTGGTCGCGAAACTGAACTT-GATGATCTAATTCAGA 150365
|| ||| ||||||||||| | |||||| | || ||| || || || |||||| ||
Sbjct 25158 AGCAGGAAAACTTGATCCTGTGATTGGTAGGGATGAAGAAATTCGAAGAG-TAATTCGGA 25100
Query 150366 TTCTTTCTCGTAAAACCAAAAAGAAT--GGTGCGTTAGTTGGTGAACCAGGTGTTGGTAA 150423
|| | || | | || || || ||| ||||| ||| ||||||| || |||||||||||
Sbjct 25099 TTTTATCGAGGAGGACAAAGAATAATCCGGTGC-TTA-TTGGTGAGCCTGGTGTTGGTAA 25042
Query 150424 AACACAAATCGTTGACGGATTAGCACAACGCATCGCTAATGGTGATGTTCCAGATTCTAT 150483
|||| | | ||||| || |||||||| | || | | || ||||| || | | |
Sbjct 25041 AACAGCAGTAGTTGAAGGGCTAGCACAAAGGATTGTTCGAGGCGATGTCCCGAGTAATTT 24982
Query 150484 GAAAGATGTTGAAATTCTTTCTTTGAATATGGGTGCATTTACTGCTGGTACTAAGTATCG 150543
| |||||| | || | | ||| | ||||| ||||| | |||||| | || ||| |
Sbjct 24981 GGCTGATGTTAGACTTATAGCATTGGACATGGGAGCATTAATTGCTGGAGCAAAATATAG 24922
Query 150544 TGGTGAATTCGAAGA 150558
|||||||| |||||
Sbjct 24921 AGGTGAATTTGAAGA 24907
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1143856916179164
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |