Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20sylvestris_20[refseq_20GCF_5F000393655.1_202013-05-16] 253,918 sequences; 2,221,987,173 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq222647 138 7e-28 seq192764 132 3e-26 seq72314 118 7e-22 seq224189 111 1e-19 seq196472 111 1e-19 seq140002 104 2e-17 seq146937 95.1 8e-15 seq24881 93.3 3e-14 seq242921 91.5 1e-13 seq58802 89.7 3e-13 seq247298 84.2 1e-11 seq182928 84.2 1e-11 seq175354 82.4 5e-11 >seq222647 Length=37102 Score = 138 bits (152), Expect = 7e-28 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | | ||| | ||| | ||| ||||| ||| || || | ||||||||||| Sbjct 27454 CACCACCACGGAGACGGAGCACGAGATGAAGAGTCGACTCCTTCTGGAGGTTGTAATCGG 27513 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 || || || ||||| |||| || |||||||| ||||||| ||||||||||||| | | Sbjct 27514 CTAGGGTTCGGTCGTCTTCCAGCTGCTTTCCGGCGAAAATCAGACGCTGCTGATCTGGGG 27573 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | ||||| || || || || |||| |||| ||| | |||||| ||||| Sbjct 27574 GAATCCCTTCCTTATCTTGGATCTTGGCTTTC-ACATTGTCGATTGTGTCGGAAGATTCA 27632 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || |||| ||||| |||||||| |||| ||||| || ||||||||||| Sbjct 27633 ACCTCAAGGGTGATTGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 27682 >seq192764 Length=177479 Score = 132 bits (146), Expect = 3e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | | ||| | ||| | ||| ||||| ||| || || ||||||||||||| Sbjct 143308 CACCACCACGGAGACGGAGCACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGG 143367 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 || || || |||| || | || |||||||| ||||||| ||||||||||||| | | Sbjct 143368 CTAGGGTTCGGCCGTCTTCAAGCTGCTTTCCGGCGAAAATCAGACGCTGCTGATCTGGGG 143427 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | ||||| || || || || |||| |||| ||| | |||||| ||||| Sbjct 143428 GAATCCCTTCCTTATCTTGGATCTTGGCTTTC-ACATTGTCGATTGTGTCGGAAGATTCA 143486 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || |||| ||||| |||||||| |||| ||||| || ||||||||||| Sbjct 143487 ACCTCAAGGGTGATTGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 143536 >seq72314 Length=63918 Score = 118 bits (130), Expect = 7e-22 Identities = 146/196 (74%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| ||||| ||||| ||||| | ||| || || | || ||||||||||| || ||||| Sbjct 54737 CTCCTTTTGAATGTTATAATCTGCGAGAGTACGCCCATCTTCCAATTGTTTCCCTGCAAA 54678 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 ||||| | ||||||||| |||| | ||| || ||||| ||||||| | | ||||| Sbjct 54677 AATCAGCCTCTGCTGATCCGGCGGGATACCCTCCTTGTCTTGAATTTTC-GCCTTAACAT 54619 Query 33678 AGTC-ACGGTGTC---GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTT 33733 || | ||||| ||| ||| || || | ||||| ||||| || ||||| |||| Sbjct 54618 TATCTATCGTGTCCGAGCT---TTCAACTTCCAGTGTGATGGTTTTTCCAGTTAAGGTTT 54562 Query 33734 TTACAAAGATCTGCAT 33749 | |||||||||||||| Sbjct 54561 TAACAAAGATCTGCAT 54546 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || ||||| || || ||||| | ||| || | | | || ||||||||||| || |||||| Sbjct 55420 TCCTTTTGAATATTATAATCTGCGAGAGTCCTTCCATCTTCCAATTGTTTCCCTGCAAAA 55361 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 |||| | |||||| ||| | || | ||| || || || || || ||| |||| Sbjct 55360 ATCAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTATCCTGTATCTTGGCCTTC-ACATT 55302 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 ||| | ||| || ||||| || | ||||||||| || || || ||||| || || Sbjct 55301 GTCAATGGTATCAGAACTCTCCACCTCCAACGTGATCGTCTTCCCCGTCAACGTCTTCAC 55242 Query 33738 AAAGATCTGCAT 33749 |||||||||||| Sbjct 55241 AAAGATCTGCAT 55230 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/206 (71%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 33548 GTAGAGTGCT--CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 || ||||| | ||| ||||| ||||| || || | || || | | || |||||||| Sbjct 55661 GTGGAGTGTTGACTCCTTTTGAATGTTATAGTCAGCAAGAGTCCTCCCATCTTCCAATTG 55602 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 ||| || |||||||||| | ||||||||| | || | ||||| || || |||||| Sbjct 55601 TTTCCCTGCAAAAATCAGCCTCTGCTGATCCGGTGGAATGCCTTCCTTATCTTGAATTTT 55542 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGAT-TCCACGTCAACCGTGATCGTTTTACCT 33723 | | ||||| ||| | ||||| | | | || || || | |||||| ||||| || Sbjct 55541 -GGCCTTAACATTGTCAATCGTGTC-CGAGCTCTCAACTTCCAACGTGATTGTTTTTCCA 55484 Query 33724 GTTAACGTTTTTACAAAGATCTGCAT 33749 ||||| || || |||||||| ||||| Sbjct 55483 GTTAAGGTCTTAACAAAGATTTGCAT 55458 >seq224189 Length=50442 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | | ||| | ||||||||| |||||| ||| || || ||||||||||| | Sbjct 16399 CACCACCACGGAGACGGAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAATCAG 16458 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 || || || | || || | ||||||||||| ||||| | |||||||| || | | Sbjct 16459 CTAGAGTTCGACCATCCTCGAGCTGTTTTCCGGCGAAAATGAGCCGCTGCTGGTCCGGTG 16518 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | ||||| ||||| || || || | || | ||| | |||||| ||||| Sbjct 16519 GGATGCCTTCCTTGTCCTGGATCTT-TGCCTTCACGTTGTCGATTGTGTCGGAGGATTCG 16577 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || |||| ||||| || ||||| || | ||||| || ||||||||||| Sbjct 16578 ACCTCAAGGGTGATGGTCTTACCCGTCAGGGTTTTCACGAAGATCTGCAT 16627 >seq196472 Length=12654 Score = 111 bits (122), Expect = 1e-19 Identities = 151/207 (73%), Gaps = 8/207 (4%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||| ||| ||||| ||||||||||| | || || ||| | || || | |||| Sbjct 7674 TGGAGAGTTGACTCCTTTTGAATGTTGTAATCCGCAAGAGTCCGTCCATCCTCGAGTTGT 7615 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 ||||| ||||| |||||||| || |||||| | || | |||||||||||| |||||| Sbjct 7614 TTTCCTGCAAAGATCAAACGTTGTTGATCTGGTGGAATACCTTCTTTGTCCTGGATTTTC 7555 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGA---TTCCACGTCAACCGTGATCGTTTTACC 33722 | || ||||| ||| | ||||| ||| || || || | || || || || || Sbjct 7554 -GATTTAACATTGTCGATCGTGTC---TGAACTCTCAACTTCGAGAGTTATAGTCTTGCC 7499 Query 33723 TGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || ||||||||||||||||| Sbjct 7498 AGTAAGAGTCTTTACAAAGATCTGCAT 7472 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| ||||| ||||| ||||| | || || | | | || || |||||||| || ||||| Sbjct 8347 CTCCTTTTGAATGTTATAATCAGCCAGAGTTCTTCCATCTTCTAATTGTTTCCCTGCAAA 8288 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 |||||| | ||||||||| | || | ||| || || || || || ||| |||| Sbjct 8287 AATCAATCTTTGCTGATCTGGTGGGATACCCTCCTTATCCTGTATCTTGGCCTTC-ACAT 8229 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 || | ||| ||| ||||| || | ||||||||| || ||||| || || || | Sbjct 8228 TATCAATGGTATCGGAACTCTCCACCTCCAACGTGATCGTCTTCCCTGTCAAAGTCTTCA 8169 Query 33737 CAAAGATCTGCAT 33749 ||||||||||||| Sbjct 8168 CAAAGATCTGCAT 8156 >seq140002 Length=100703 Score = 104 bits (114), Expect = 2e-17 Identities = 165/233 (71%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | |||||| | || | || || ||| ||| ||||| |||||||| || | Sbjct 55560 ACCACCACGCAAACGGAGAACAAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGC 55501 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || || | ||| ||||| ||||| ||||| | |||||||| | || Sbjct 55500 AAGGGTACGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAACCTTTGCTGATCCGGAGG 55441 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGAT---T 33697 | ||||| ||||| ||| || || | ||||| ||| ||||| ||| | Sbjct 55440 AATGCCTTCCTTGTCCTGAATCTT-TGCCTTAACATTATCAATTGTGTC---TGAGCTCT 55385 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || | ||||| || || |||||||| ||||||||||||||||||||| Sbjct 55384 CAACCTCGAGAGTGATAGTCTTCCCTGTTAAAGTTTTTACAAAGATCTGCATA 55332 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| |||| | | ||||| ||| |||||| || || || || ||||| || | Sbjct 55788 ACCACCCCTCAGCCTCAGCACCAGATGGAGAGTGGATTCCTTCTGAATATTGTAGTCAGC 55729 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || || | ||| ||||| ||||| ||||| | |||||||||| | || Sbjct 55728 AAGGGTACGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGAGG 55669 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700 | |||||||| || ||||| ||| | ||| |||| || || || | Sbjct 55668 AATGCCTTCTTTATCCTGGATTTTAGCTTTGA-CATTGTCAATTGTATCAGAACTCTCAA 55610 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| || || || || ||||| || ||||||||||||||||||||| Sbjct 55609 CCTCAAGGGTAATAGTCTTTCCTGTCAAAGTTTTTACAAAGATCTGCATA 55560 Score = 96.9 bits (106), Expect = 2e-15 Identities = 168/241 (70%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || || |||||||| || | ||||||||| || ||| |||||| || ||| Sbjct 56255 AAAATCTGCATCCCTCCTCTCAAGCGGAGCACCAAATGGAGTGTGGACTCTTTCTGGATG 56196 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| | || || | | || || | || || || |||||||| || | |||| Sbjct 56195 TTGTAATCAGCAAGAGTCCTCCCATCCTCAAGCTGCTTCCCAGCAAAAATTAACCTCTGC 56136 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || || | || | ||||| || || |||||| | | |||| || | |||||| Sbjct 56135 TGGTCAGGTGGGATCCCTTCCTTATCTTGAATTTT-AGCCTTGACATTATCGATGGTGTC 56077 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || |||| ||||| ||||| ||||| | || || |||||||||||||| Sbjct 56076 AGAACTCTCAACCTCAAGGGTGATAGTTTTCCCTGTCAGTGTCTTCACAAAGATCTGCAT 56017 Query 33750 A 33750 | Sbjct 56016 A 56016 Score = 91.5 bits (100), Expect = 1e-13 Identities = 162/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| || | || | ||||||||| || || || || || ||||||||||| | Sbjct 56016 ACCACCCCTAAGGCGCAGCACCAAATGGAGGGTTGATTCCTTCTGGATGTTGTAATCAGC 55957 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||||| | | | || || | || || || |||||||| | | |||||| || | || Sbjct 55956 TAGTGTCCTTCCATCCTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCAGGTGG 55897 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGAT-TCC 33699 | ||||| || || |||||| || | ||||| ||| | |||||| | | | || Sbjct 55896 AATCCCTTCCTTATCTTGAATTTT-TGCCTTAACATTGTCGATGGTGTC-CGAGCTCTCA 55839 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || |||| || || ||||| || || || ||||| |||||||| |||||| Sbjct 55838 ACTTCAAGAGTAATAGTTTTCCCGGTCAAGGTTTTCACAAAGATTTGCATA 55788 >seq146937 Length=209544 Score = 95.1 bits (104), Expect = 8e-15 Identities = 167/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||| | | ||| | |||||| || ||||| ||| || || || Sbjct 83634 AAAATCTGCATTCCACCACGAAGACGGAGCACCAAGTGAAGAGTCGACTCCTTCTGAATA 83575 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| | | || | | | || |||||||| || || ||||||||||| | ||| Sbjct 83574 TTGTAATCAGCTAAGGTCCTTCCATCTTCCAATTGCTTACCAGCAAAAATCAACCTTTGC 83515 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || ||| | || | || || || || ||||| | | ||||| ||| | ||||| Sbjct 83514 TGGTCTGGTGGGATTCCCTCCTTATCCTGGATTTT-AGCCTTAACATTGTCAATAGTGTC 83456 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | ||| || |||| ||||| ||||| || ||||| ||||| || || |||||||| Sbjct 83455 GGAGCTTTCGACTTCAAGGGTGATTGTTTTCCCAGTTAAGGTTTTGACGAAAATCTGCAT 83396 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| | |||||| || || || || || || |||||||| |||| || || | | Sbjct 83155 ACGGAGCACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTACC 83096 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 ||| || | || |||||||| || ||||| | |||||| || | || | |||||||| Sbjct 83095 GTCTTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATTCCTTCTTT 83036 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| ||| || | | ||| | ||| | |||||| ||| || |||| |||| Sbjct 83035 GTCCTGAATCTT-AGCCTTAACGTTGTCAATAGTGTCGGAGCTTTCAACCTCAAGGGTGA 82977 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | ||||| || |||| ||||| || ||||||||||| Sbjct 82976 TTGTTTTTCCGGTTAGGGTTTTCACGAAGATCTGCAT 82940 Score = 87.8 bits (96), Expect = 1e-12 Identities = 166/241 (69%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||| | | ||| | ||||| || || || || || || ||| Sbjct 83406 AAAATCTGCATCCCACCACGAAGACGAAGGACCAAGTGAAGGGTCGATTCCTTCTGGATG 83347 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| | || || | |||| || | ||| |||||||| |||||||| | ||| Sbjct 83346 TTGTAATCAGCTAGGGTTCTGCCGTCTTCGAGTTGCTTTCCGGCGAAAATCAACCTTTGC 83287 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || ||| | || | || || ||||| ||| || | | ||| | ||| | ||||| Sbjct 83286 TGGTCTGGTGGGATTCCCTCCTTGTCCTGAATCTT-AGCCTTAACGTTGTCGATAGTGTC 83228 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | ||| || |||| ||||| ||||| || |||| ||||| |||||||| ||||| Sbjct 83227 GGAGCTTTCGACTTCAAGGGTGATTGTTTTCCCGGTTAGGGTTTTAACAAAGATTTGCAT 83168 Query 33750 A 33750 | Sbjct 83167 A 83167 >seq24881 Length=242481 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | | ||| | ||||||||| |||||| ||| || | ||||||||||| | Sbjct 141212 CACCACCACGGAGACGGAGCACCAAATGGAGAGTGGACTCCTTCTAGATGTTGTAATCAG 141153 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 || || || | || || | ||||||||||| ||||| | |||||||| || | Sbjct 141152 CTAGAGTTCGACCATCCTCAAGCTGTTTTCCGGCGAAAATGAGCCGCTGCTGGTCCGATG 141093 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACGGTGTCGCTTGATTCCA 33700 | | ||||| ||||| || || |||| || | |||||| ||||| | Sbjct 141092 GGATGCCTTCCTTGTCCTGGATCTTTGCCTTCACGTTATCAATTGTGTCGGAGGATTCGA 141033 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||| || || || ||||| || | ||||| || ||||||||||| Sbjct 141032 CCTCAAGGGTAATGGTCTTACCCGTCAGGGTTTTCACGAAGATCTGCAT 140984 >seq242921 Length=127737 Score = 91.5 bits (100), Expect = 1e-13 Identities = 169/243 (70%), Gaps = 10/243 (4%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||| | || ||| | || | || || ||| || || || ||| Sbjct 49345 AAAATCTGCATGCCACCACGCAGACGGAGGACAAGGTGAAGGGTGGATTCCTTCTGAATG 49286 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 ||||| |||| || || ||| | || || | || || || ||||||||||| | |||| Sbjct 49285 TTGTAGTCGGCAAGAGTTCGTCCATCCTCAAGCTGCTTACCAGCAAAAATCAACCTCTGC 49226 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || ||| | || | ||||| ||||| || ||| | | ||||| ||| | |||||| Sbjct 49225 TGGTCTGGAGGGATGCCTTCCTTGTCCTGGATCTTC-GCCTTAACATTGTCAATGGTGTC 49167 Query 33690 ---GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTG 33746 ||| || || |||| ||||| || || || || || ||||| ||||||||||| Sbjct 49166 AGAGCT---CTCAACCTCAAGGGTGATGGTCTTCCCAGTCAAAGTTTTCACAAAGATCTG 49110 Query 33747 CAT 33749 ||| Sbjct 49109 CAT 49107 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||| | || | || || ||| ||| || || |||||||| || | Sbjct 49561 CCACCACGCAGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 49502 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || ||| | || || | || || || ||||||||||| | |||||||||| | || Sbjct 49501 AGAGTTCGTCCATCCTCGAGCTGCTTACCAGCAAAAATCAACCTCTGCTGATCTGGAGGG 49442 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || | |||| ||| | ||||||| || || Sbjct 49441 ATGCCTTCCTTGTCCTGGATCTT-TGCCTTGACATTGTCAATGGTGTCGGAGCTCTCAAC 49383 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || || || || || ||||| ||||| |||||||| Sbjct 49382 CTCAAGGGTGATGGTCTTCCCAGTCAAAGTTTTCACAAAAATCTGCAT 49335 >seq58802 Length=2471 Score = 89.7 bits (98), Expect = 3e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||||||| || |||||||| ||||| ||| ||||| ||||| || || | Sbjct 1922 CCTCCCCTCAAACGCAAGACCAAATGGAGAGTCGACTCCTTTTGGATGTTATAGTCCGCA 1863 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | |||| |||| ||||| || |||||||||||||||||||| ||| |||| Sbjct 1862 ATAGTCCTACCGTCCTCCAGCTGTTTACCAGCAAAAATCAAACGCTGCTGGTCTGGCGG 1804 >seq247298 Length=34911 Score = 84.2 bits (92), Expect = 1e-11 Identities = 134/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| | ||| | ||| ||||| ||| || || ||||||||||||| || || | || Sbjct 32907 ACGGAGCACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGCTAGGGTATGGTC 32966 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 ||| || | || |||||| | ||||||| ||||||||||| | | || | |||| || Sbjct 32967 GTCTTCAAGCTGCTTTCCGACGAAAATCAGACGCTGCTGATATGGGGGAATCACTTCCTT 33026 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 || || || |||| |||| ||| | |||| | ||||| || |||| |||| Sbjct 33027 ATCTTGGATCTTGGCTTTC-ACATTGTCGATTGTGTTGGAAGATTCAACCTCAAGGGTGA 33085 Query 33713 TCGTTTTACC 33722 | |||||||| Sbjct 33086 TTGTTTTACC 33095 >seq182928 Length=15200 Score = 84.2 bits (92), Expect = 1e-11 Identities = 168/242 (69%), Gaps = 9/242 (4%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || |||||||| | | | | || | || || || |||||| || ||| Sbjct 4845 AAAATCTGCATGCCACCTCTAAGATGAAGAACAAGGTGCAGGGTTGACTCTTTCTGAATG 4786 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| | | | | | |||| || | ||| || || ||||| |||| | |||| Sbjct 4785 TTGTAATCTGTCAAT-TCCTCCCGTCCTCAAGTTGCTTCCCAGCAAAGATCAGTCTCTGC 4727 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || ||| | || | |||||| ||||| || || || || ||||| ||| | ||| || Sbjct 4726 TGGTCTGGAGGAATACCTTCCTTGTCTTGGATCTT-TGCTTTAACATTGTCGATGGTATC 4668 Query 33690 GCTTGA--TTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGC 33747 || | ||| || |||| ||||| || || || || | ||| || |||||||||||| Sbjct 4667 --TTAACTTTCAACTTCAAGGGTGATTGTCTTGCCGGTAAGCGTCTTGACAAAGATCTGC 4610 Query 33748 AT 33749 || Sbjct 4609 AT 4608 >seq175354 Length=42077 Score = 82.4 bits (90), Expect = 5e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 |||||| || ||||||||||| | | ||| | |||| || | ||| || || ||||| Sbjct 17512 CTCTTTCTGAATGTTGTAATCTGCCAATGTCCTCCCGTCCTCAAGTTGCTTCCCAGCAAA 17571 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 |||| | || ||| ||| | || | |||||| ||||| || || | || ||||| Sbjct 17572 GATCAGTCTCTACTGGTCTGGAGGAATACCTTCCTTGTCTTTGATCTT-TACTTTAACAT 17630 Query 33678 AGTC-ACGGTGTCGCTTGA---TTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTT 33733 ||| | ||| || ||| ||| || |||| ||||| || || || || | ||| | Sbjct 17631 TGTCAATGGTATC---TGAACTTTCAACTTCAAGGGTGATTGTCTTGCCGGTAAGCGTCT 17687 Query 33734 TTACAAAGATCTGCAT 33749 | |||||||||||||| Sbjct 17688 TGACAAAGATCTGCAT 17703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 327686784178560