Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20sylvestris_20[refseq_20GCF_5F000393655.1_202013-05-16]
253,918 sequences; 2,221,987,173 total letters
Query= NC_028104.1
Length=73689
Score E
Sequences producing significant alignments: (Bits) Value
seq178539 91.5 7e-14
>seq178539
Length=77810
Score = 91.5 bits (100), Expect = 7e-14
Identities = 155/223 (70%), Gaps = 4/223 (2%)
Strand=Plus/Minus
Query 65087 CGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTC 65146
|| || ||||| ||||||||||| || | ||| | ||| || |||| | | | |
Sbjct 24822 CGAGTGCCAAATTGACCATTTGGTTGCAAAAGATTTACATTATTACTGCCAACATAGTCC 24763
Query 65147 TGAGCCATTCCGATAAT--TGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAAT 65204
|| ||||| || || || |||||| | | |||| |||||| || ||||| |||| |
Sbjct 24762 TGTGCCATGCCAATGATGGTGCTGC--TAAGACTCTGTTCACCATGGTGATAAGCTGAGT 24705
Query 65205 GTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAA 65264
| ||||||||||| ||| |||||| | ||||||| |||| | || ||| | ||||
Sbjct 24704 GCTCAGAGACATAACCAGAAAATTGGGAAACTTTTGCTTCCTTAACAAAGTTCCTCTTAA 24645
Query 65265 ATGCAGAATACAATATTTTCCGTAAACTAATTTTCAATCCATC 65307
| ||| | ||| || |||| | || |||||| |||||
Sbjct 24644 ACGCACAGAACAGAATCTTCCTTTGACCCGGTTTCAAACCATC 24602
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 234950658632700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |