Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20sylvestris_20[refseq_20GCF_5F000393655.1_202013-05-16]
253,918 sequences; 2,221,987,173 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq28647 145 5e-30
seq188529 143 2e-29
seq179153 136 2e-27
seq72314 136 2e-27
seq24881 125 4e-24
seq196472 122 5e-23
seq224189 118 7e-22
seq140002 116 2e-21
seq146937 111 1e-19
seq242921 107 1e-18
seq182928 102 5e-17
seq58802 98.7 6e-16
seq157592 93.3 3e-14
seq182284 89.7 3e-13
>seq28647
Length=54725
Score = 145 bits (160), Expect = 5e-30
Identities = 162/214 (76%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 34488 AAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCG 34547
|||||||||||| | |||||| ||| ||||| |||||||||||||| | |||||||||
Sbjct 9673 AAGACGCAACACAAGATGGAGTGTGGATTCCTTCTGAATGTTATAATCAGCAAGTGTTCG 9614
Query 34548 CTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTC 34607
| ||||| |||||||| || ||| | ||||| | |||||||| || || | ||| ||
Sbjct 9613 ACCATCTTCGAGTTGTTTTCCAGCATAAATTAACCTTTGTTGGTCTGGAGGAATTCCTTC 9554
Query 34608 CTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGG 34666
||||||| ||| ||||||||||| | ||| |||||| |||||| ||||| | |
Sbjct 9553 CTTGTCT-TGAATCTTTGTTTTAACATTGTCAATGGTGTCTGAGCTCTCAACTTCGAGTG 9495
Query 34667 TTATCGTTTTACCGGTTAACGTTTTCACAAAAAT 34700
|||| || || || || | || || || || ||
Sbjct 9494 TTATGGTCTTTCCAGTAAGGGTCTTGACGAAGAT 9461
>seq188529
Length=122975
Score = 143 bits (158), Expect = 2e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || || | ||||||||||| ||| || || |||||| || ||||||||||| | |
Sbjct 109254 CCTCCCCTCAAACGCAACACCAGATGAAGTGTCGACTCCTTCTGTATGTTATAATCAGCA 109195
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| | | ||||||||||| || || |||||||| || ||||| ||||| || ||
Sbjct 109194 AGTGTCCTTCCATCTTCAAGTTGCTTCCCTGCAAATATCAATCGCTGCTGGTCAGGGGGA 109135
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658
| ||| ||||||||| ||| ||| | || ||| || |||||||||| ||||| ||
Sbjct 109134 ATTCCTTCCTTGTCT-TGAATTTTGGCCTTCACGTTATCAATTGTGTCTGAACTCTCAAC 109076
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | || || ||||| || || | || || ||||| ||||||||
Sbjct 109075 CTCGAGAGTAATGGTTTTTCCAGTGAGTGTCTTTACAAATATCTGCAT 109028
Score = 109 bits (120), Expect = 3e-19
Identities = 168/237 (71%), Gaps = 2/237 (1%)
Strand=Plus/Minus
Query 34471 CAATCGTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTA 34530
|||| || || || | ||| || | ||| | ||||| ||| |||||||| || ||
Sbjct 109491 CAATATTCACCACCACGAAGGCGAAGCACAAGGTGGAGTGTGGATTCCTTTTGGATATTG 109432
Query 34531 TAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGG 34590
||||||| ||| || ||| | || || || || ||||| |||||||| | | ||| ||
Sbjct 109431 TAATCTGCAAGGGTGCGCCCATCCTCCAGCTGCTTACCAGCAAATATGAGCCTCTGCTGA 109372
Query 34591 TCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTC 34649
|| || || | || || || || ||| ||| | || ||| | ||| |||||
Sbjct 109371 TCTGGTGGGATCCCTTCTTTATCC-TGAATTTTGGCCTTCACGTTGTCAATAGTGTCAGA 109313
Query 34650 GCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||||||||||||| || || || || || || || ||||| ||||||||||||||
Sbjct 109312 GCTCTCCACTTCCAAAGTGATGGTCTTTCCTGTCAAAGTTTTGACAAAAATCTGCAT 109256
>seq179153
Length=7583
Score = 136 bits (150), Expect = 2e-27
Identities = 169/229 (74%), Gaps = 3/229 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||||||||| | |||||||||| ||||| || || || ||||| | |
Sbjct 4528 CCTCCGCGAAGACGCAACACAAGATGGAGAGTGGATTCCTTCTGGATATTGTAATCAGCA 4587
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|||||||| | || || |||||||| || ||||| ||||| | ||||| || || ||
Sbjct 4588 AGTGTTCGACCATCCTCGAGTTGTTTTCCAGCAAAAATTAACCTTTGTTGATCTGGAGGA 4647
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA--AATTGTGTCTTCGCTCTCCA 34657
| ||| ||||||||| ||| |||||||||||| | | ||| ||||| |||||| |
Sbjct 4648 ATTCCTTCCTTGTCT-TGAATTTTTGTTTTAACATTTATCAATGGTGTCCGAGCTCTCAA 4706
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || | || || || || || || | || || ||||| || |||||
Sbjct 4707 CCTCGAGTGTAATGGTCTTTCCTGTGAGTGTCTTAACAAAGATTTGCAT 4755
>seq72314
Length=63918
Score = 136 bits (150), Expect = 2e-27
Identities = 154/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| || ||||||||||||||||||||||| || || ||| | ||||| | ||||
Sbjct 54748 TGGAGGGTTGACTCCTTTTGAATGTTATAATCTGCGAGAGTACGCCCATCTTCCAATTGT 54689
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| || ||||| || | | ||| || |||||||| | |||||||||||| ||| |||
Sbjct 54688 TTCCCTGCAAAAATCAGCCTCTGCTGATCCGGCGGGATACCCTCCTTGTCT-TGAATTTT 54630
Query 34624 TGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| ||||| || || ||||| ||| || ||||||| || || ||||| || ||
Sbjct 54629 CGCCTTAACATTATCTATCGTGTCCGAGCTTTCAACTTCCAGTGTGATGGTTTTTCCAGT 54570
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
||| ||||| ||||| ||||||||
Sbjct 54569 TAAGGTTTTAACAAAGATCTGCAT 54546
Score = 118 bits (130), Expect = 7e-22
Identities = 150/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
|| |||||| ||||| || ||||||||||| | || |||| | ||||| | |||
Sbjct 55204 TGAAGAGTGGATTCCTTCTGGATGTTATAATCAGCCAGAGTTCTTCCATCTTCTAATTGC 55145
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| || ||||| || | | ||| ||||| ||||| | || ||||| ||| ||| |||
Sbjct 55144 TTCCCAGCAAAAATCAGCCTCTGCTGGTCTGGCGGGATACCTTCCTTATCTTGGAT-TTT 55086
Query 34624 TGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
|| ||||| || ||||||||| |||||| ||||||| || || ||||| || ||
Sbjct 55085 CGTCTTAACATTATCAATTGTGTCCGAGCTCTCAACTTCCAATGTAATGGTTTTCCCTGT 55026
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
||| ||||| ||||| || |||||
Sbjct 55025 TAAGGTTTTAACAAAGATTTGCAT 55002
Score = 109 bits (120), Expect = 3e-19
Identities = 148/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| || |||||||||||||||||| || | ||| || | | | ||||| | ||||
Sbjct 55660 TGGAGTGTTGACTCCTTTTGAATGTTATAGTCAGCAAGAGTCCTCCCATCTTCCAATTGT 55601
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| || ||||| || | | ||| || ||||| || | || ||||| ||| ||| |||
Sbjct 55600 TTCCCTGCAAAAATCAGCCTCTGCTGATCCGGTGGAATGCCTTCCTTATCT-TGAATTTT 55542
Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| ||||| | ||| ||||| |||||| ||||||| || || ||||| || ||
Sbjct 55541 GGCCTTAACATTGTCAATCGTGTCCGAGCTCTCAACTTCCAACGTGATTGTTTTTCCAGT 55482
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
||| || || ||||| || |||||
Sbjct 55481 TAAGGTCTTAACAAAGATTTGCAT 55458
Score = 96.9 bits (106), Expect = 2e-15
Identities = 141/194 (73%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575
||||||||||| |||||||||| || || | | ||||| | |||||| || |||||
Sbjct 55420 TCCTTTTGAATATTATAATCTGCGAGAGTCCTTCCATCTTCCAATTGTTTCCCTGCAAAA 55361
Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGT-CTGTGATCTTTTGTTTTAACGA 34634
|| | | ||| ||||| || || | |||||||| | |||| ||| || | || ||
Sbjct 55360 ATCAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTATCCTGT-ATC-TTGGCCTTCACAT 55303
Query 34635 T-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693
| ||| || || |||||||| |||| || ||||| || || || ||||| ||||
Sbjct 55302 TGTCAATGGTATCAGAACTCTCCACCTCCAACGTGATCGTCTTCCCCGTCAACGTCTTCA 55243
Query 34694 CAAAAATCTGCATG 34707
|||| |||||||||
Sbjct 55242 CAAAGATCTGCATG 55229
>seq24881
Length=242481
Score = 125 bits (138), Expect = 4e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||||||||||||||| |||||| | ||||| ||||| | || |||||
Sbjct 141201 AGACGGAGCACCAAATGGAGAGTGGACTCCTTCTAGATGTTGTAATCAGCTAGAGTTCGA 141142
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || ||||| ||||| ||||| || || | ||||| ||||||| || | || |||
Sbjct 141141 CCATCCTCAAGCTGTTTTCCGGCGAAAATGAGCCGCTGCTGGTCCGATGGGATGCCTTCC 141082
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| |||| |||| || ||| || ||||||||| | || || || | |||
Sbjct 141081 TTGTCCTGGATC-TTTGCCTTCACGTTATCAATTGTGTCGGAGGATTCGACCTCAAGGGT 141023
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATTGT 34715
|| || ||||| || | |||||||| || |||||||| || ||||
Sbjct 141022 AATGGTCTTACCCGTCAGGGTTTTCACGAAGATCTGCATCTTCGTTGT 140975
>seq196472
Length=12654
Score = 122 bits (134), Expect = 5e-23
Identities = 151/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| || |||||||||||| |||||||||| || || ||| | ||||| | |||
Sbjct 7902 TGGAGCGTTGACTCCTTTTGAATATTATAATCTGCCAGAGTGCGCCCATCTTCCAATTGC 7843
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| || ||||| || | | ||||||||||| || | || ||||| ||| ||| |||
Sbjct 7842 TTCCCAGCAAAAATCAGCCTTTGTTGGTCCGGTGGAATACCTTCCTTATCT-TGAATTTT 7784
Query 34624 TGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| ||||||| || ||| ||||| |||||| ||||||| || || ||||| || ||
Sbjct 7783 CGCTTTAACGTTATCAATAGTGTCCGTGCTCTCAACTTCCAATGTGATTGTTTTTCCAGT 7724
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
|| || || ||||| || |||||
Sbjct 7723 CAATGTCTTAACAAATATTTGCAT 7700
Score = 109 bits (120), Expect = 3e-19
Identities = 148/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
|||||||| ||||||||||||||| ||||| | ||| || || | || || ||||||
Sbjct 7674 TGGAGAGTTGACTCCTTTTGAATGTTGTAATCCGCAAGAGTCCGTCCATCCTCGAGTTGT 7615
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| || ||||| || ||||| ||||| || || || | || || ||||| ||| |||
Sbjct 7614 TTTCCTGCAAAGATCAAACGTTGTTGATCTGGTGGAATACCTTCTTTGTCCTGGAT-TTT 7556
Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| |||||| | || |||||| ||||| ||||| | ||||| || || || ||
Sbjct 7555 CGATTTAACATTGTCGATCGTGTCTGAACTCTCAACTTCGAGAGTTATAGTCTTGCCAGT 7496
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
| || || ||||| ||||||||
Sbjct 7495 AAGAGTCTTTACAAAGATCTGCAT 7472
Score = 105 bits (116), Expect = 4e-18
Identities = 140/192 (73%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575
||||| || ||||||||||| | || ||||| | ||||| | ||| || || |||||
Sbjct 8118 TCCTTCTGGATGTTATAATCAGCCAGAGTTCGTCCATCTTCTAATTGCTTCCCAGCAAAA 8059
Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635
|| | | ||| || ||||| || | |||||||||||| ||| ||| | ||||| |
Sbjct 8058 ATCAGCCTCTGCTGATCCGGTGGGATACCCTCCTTGTCT-TGAATTTTAGCCTTAACATT 8000
Query 34636 -AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694
|| ||||| |||||| ||||||| || || ||||| || ||||| || || ||
Sbjct 7999 GTCTATCGTGTCCGAGCTCTCAACTTCCAACGTGATTGTTTTTCCAGTTAAGGTCTTAAC 7940
Query 34695 AAAAATCTGCAT 34706
|||||| |||||
Sbjct 7939 AAAAATTTGCAT 7928
Score = 100 bits (110), Expect = 2e-16
Identities = 149/206 (72%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| || ||||||||||||||||||||| | || |||| | ||||| | ||||
Sbjct 8358 TGGAGTGTCGACTCCTTTTGAATGTTATAATCAGCCAGAGTTCTTCCATCTTCTAATTGT 8299
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGT-CTGTGATCTT 34622
|| || ||||| || || | || || || || || | |||||||| | |||| ||| |
Sbjct 8298 TTCCCTGCAAAAATCAATCTTTGCTGATCTGGTGGGATACCCTCCTTATCCTGT-ATC-T 8241
Query 34623 TTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681
| | || || || ||| || || |||||||| |||| || ||||| || || |
Sbjct 8240 TGGCCTTCACATTATCAATGGTATCGGAACTCTCCACCTCCAACGTGATCGTCTTCCCTG 8181
Query 34682 TTAACGTTTTCACAAAAATCTGCATG 34707
| || || |||||||| |||||||||
Sbjct 8180 TCAAAGTCTTCACAAAGATCTGCATG 8155
>seq224189
Length=50442
Score = 118 bits (130), Expect = 7e-22
Identities = 161/222 (73%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||||||||||||||| |||||| || ||||| ||||| | || |||||
Sbjct 16410 AGACGGAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAATCAGCTAGAGTTCGA 16469
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || ||||| ||||| || || | ||||| |||||||| || | || |||
Sbjct 16470 CCATCCTCGAGCTGTTTTCCGGCGAAAATGAGCCGCTGCTGGTCCGGTGGGATGCCTTCC 16529
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| |||| |||| || ||| | |||||||| | || || || | |||
Sbjct 16530 TTGTCCTGGATC-TTTGCCTTCACGTTGTCGATTGTGTCGGAGGATTCGACCTCAAGGGT 16588
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709
|| || ||||| || | |||||||| || |||||||| ||
Sbjct 16589 GATGGTCTTACCCGTCAGGGTTTTCACGAAGATCTGCATCTT 16630
>seq140002
Length=100703
Score = 116 bits (128), Expect = 2e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || ||||| |||| |||||||||||| || ||||| || ||||| ||||| |
Sbjct 56015 CCACCCCTAAGGCGCAGCACCAAATGGAGGGTTGATTCCTTCTGGATGTTGTAATCAGCT 55956
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| | | || ||||| || || || ||||| || | | ||| ||||| || ||
Sbjct 55955 AGTGTCCTTCCATCCTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCAGGTGGA 55896
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || ||||| ||| ||| ||||| ||||| | || ||||| |||||| ||
Sbjct 55895 ATCCCTTCCTTATCT-TGAATTTTTGCCTTAACATTGTCGATGGTGTCCGAGCTCTCAAC 55837
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | || || ||||| ||||| || ||||||||||| || |||||
Sbjct 55836 TTCAAGAGTAATAGTTTTCCCGGTCAAGGTTTTCACAAAGATTTGCAT 55789
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | || | |||||||||||| ||| ||| || || ||||| ||||| | |
Sbjct 56243 CCTCCTCTCAAGCGGAGCACCAAATGGAGTGTGGACTCTTTCTGGATGTTGTAATCAGCA 56184
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || | | | || ||||| || || || ||||| ||||| | ||| ||||| || ||
Sbjct 56183 AGAGTCCTCCCATCCTCAAGCTGCTTCCCAGCAAAAATTAACCTCTGCTGGTCAGGTGGG 56124
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658
| || ||||| ||| ||| ||| | || || || || ||||| ||||| ||
Sbjct 56123 ATCCCTTCCTTATCT-TGAATTTTAGCCTTGACATTATCGATGGTGTCAGAACTCTCAAC 56065
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | ||| || ||||| || || | || |||||||| ||||||||
Sbjct 56064 CTCAAGGGTGATAGTTTTCCCTGTCAGTGTCTTCACAAAGATCTGCAT 56017
Score = 95.1 bits (104), Expect = 8e-15
Identities = 154/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||| || ||||| || || |||||||||||||| | ||| || ||
Sbjct 56462 AGACGAAGAACCAGGTGAAGAGTTGATTCTTTCTGAATGTTATAATCAGCAAGGGTACGA 56403
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || || ||||| ||||| || | | ||| ||||| || || | ||||||
Sbjct 56402 CCATCCTCCAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGAATACCCTCC 56343
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|| || ||| |||| || || | ||| || || |||||| || |||| |||
Sbjct 56342 TTATC-CTGAATCTTTGCCTTCACATTGTCAATGGTATCCGAGCTCTCAACCTCCAAGGT 56284
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| || || || || || || ||||||||||||||
Sbjct 56283 GATCGTCTTCCCAGTCAAAGTCTTGACAAAAATCTGCAT 56245
>seq146937
Length=209544
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | |||||| || ||||| |||||| ||||| || ||||| |
Sbjct 83622 CCACCACGAAGACGGAGCACCAAGTGAAGAGTCGACTCCTTCTGAATATTGTAATCAGCT 83563
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| || | | ||||| | ||| ||||| ||||| || || | || ||||| || ||
Sbjct 83562 AAGGTCCTTCCATCTTCCAATTGCTTACCAGCAAAAATCAACCTTTGCTGGTCTGGTGGG 83503
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658
| ||||||||| || ||| ||| | ||||| | ||| ||||| ||| || ||
Sbjct 83502 ATTCCCTCCTTATCCTGGAT-TTTAGCCTTAACATTGTCAATAGTGTCGGAGCTTTCGAC 83444
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | ||| || ||||| || ||||| ||||| || |||||||||||
Sbjct 83443 TTCAAGGGTGATTGTTTTCCCAGTTAAGGTTTTGACGAAAATCTGCAT 83396
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | ||||| || || || ||||| || ||||| ||||| |
Sbjct 83394 CCACCACGAAGACGAAGGACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAATCAGCT 83335
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| ||||||| ||||| || ||||| || || || | || ||||| || ||
Sbjct 83334 AGGGTTCTGCCGTCTTCGAGTTGCTTTCCGGCGAAAATCAACCTTTGCTGGTCTGGTGGG 83275
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| |||||||||||| ||| || | |||||| | || ||||| ||| || ||
Sbjct 83274 ATTCCCTCCTTGTC-CTGAATCTTAGCCTTAACGTTGTCGATAGTGTCGGAGCTTTCGAC 83216
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | ||| || ||||| ||||||| ||||| ||||| || |||||
Sbjct 83215 TTCAAGGGTGATTGTTTTCCCGGTTAGGGTTTTAACAAAGATTTGCAT 83168
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | ||| | || | ||| |||||| || ||||| ||||| | |
Sbjct 83850 CCACCACGAAGACGAAGCACAAGGTGCAAAGTTGACTCCTTCTGGATGTTGTAATCAGCA 83791
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| ||||| | ||||| | || ||||| ||||| || | | || || || || ||
Sbjct 83790 AGGGTTCGGCCATCTTCCAACTGCTTACCAGCAAAGATCAGCCTTTGCTGATCTGGTGGG 83731
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658
| |||||||| || |||||| | |||||| | || ||||| ||| |||||
Sbjct 83730 ATACCCTCCTTATCCTGGATCTTC-GCCTTAACGTTGTCGATAGTGTCAGAGCTTTCCAC 83672
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | || || ||||| ||||| || || || ||||||||||||||
Sbjct 83671 CTCAAGAGTGATGGTTTTCCCGGTCAAAGTCTTGACAAAAATCTGCAT 83624
Score = 91.5 bits (100), Expect = 9e-14
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
|| ||||| |||||| || ||||||||||| | || |||| | ||||| | ||
Sbjct 84054 TGCAGAGTCGACTCCTTCTGGATGTTATAATCCGCCAGAGTTCTTCCATCTTCCAACTGC 83995
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| || ||||| || | | ||| || ||||| || | ||||||||||| |||||
Sbjct 83994 TTCCCAGCAAAAATCAGCCTCTGCTGATCCGGGGGAATACCCTCCTTGTCCTGAATCTTA 83935
Query 34624 TGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| || || | ||| || || |||||||| |||| || || ||||| || ||
Sbjct 83934 -GCCTTCACATTGTCAATAGTATCGGAACTCTCCACCTCCAAAGTGATGGTTTTCCCTGT 83876
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
||||| |||||||||||||||||
Sbjct 83875 CAACGTCTTCACAAAAATCTGCAT 83852
>seq242921
Length=127737
Score = 107 bits (118), Expect = 1e-18
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575
||||| |||||||| || || | ||| ||||| | || ||||| || ||||| |||||
Sbjct 49297 TCCTTCTGAATGTTGTAGTCGGCAAGAGTTCGTCCATCCTCAAGCTGCTTACCAGCAAAA 49238
Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635
|| || | ||| ||||| || || | || |||||||| |||||| | ||||| |
Sbjct 49237 ATCAACCTCTGCTGGTCTGGAGGGATGCCTTCCTTGTCCTGGATCTTC-GCCTTAACATT 49179
Query 34636 AA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694
||| ||||| |||||| || || | ||| || || || || || || ||||||||
Sbjct 49178 GTCAATGGTGTCAGAGCTCTCAACCTCAAGGGTGATGGTCTTCCCAGTCAAAGTTTTCAC 49119
Query 34695 AAAAATCTGCATG 34707
||| |||||||||
Sbjct 49118 AAAGATCTGCATG 49106
Score = 105 bits (116), Expect = 4e-18
Identities = 148/205 (72%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| ||| |||||| || ||||| || || | ||| ||||| | || || || ||
Sbjct 49537 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCGTCCATCCTCGAGCTGC 49478
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
||||| ||||| || || | ||| || || || || | || |||||||| |||||||
Sbjct 49477 TTACCAGCAAAAATCAACCTCTGCTGATCTGGAGGGATGCCTTCCTTGTCCTGGATCTTT 49418
Query 34624 TGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| || || | ||| ||||| |||||| || || | ||| || || || || ||
Sbjct 49417 -GCCTTGACATTGTCAATGGTGTCGGAGCTCTCAACCTCAAGGGTGATGGTCTTCCCAGT 49359
Query 34683 TAACGTTTTCACAAAAATCTGCATG 34707
|| |||||||||||||||||||||
Sbjct 49358 CAAAGTTTTCACAAAAATCTGCATG 49334
Score = 104 bits (114), Expect = 1e-17
Identities = 156/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||| | || || ||| || || || ||||||||||||| ||| || ||
Sbjct 50236 AGACGAAGCACGAGGTGAAGGGTGGATTCTTTCTGGATGTTATAATCTGCAAGGGTACGA 50177
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || || ||||| ||||| || | | ||| || || || || | ||||||
Sbjct 50176 CCATCCTCCAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGATCTGGTGGAATACCCTCC 50117
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| |||||| | ||| || || ||| || ||| ||||||||| |||| ||
Sbjct 50116 TTGTCCTGAATCTTT-GCTTTCACATTATCAATAGTATCTGAGCTCTCCACCTCCAAAGT 50058
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || || |||| || || ||||||||||||||
Sbjct 50057 GATGGTCTTCCCAGTTAGAGTCTTGACAAAAATCTGCAT 50019
>seq182928
Length=15200
Score = 102 bits (112), Expect = 5e-17
Identities = 133/183 (73%), Gaps = 1/183 (1%)
Strand=Plus/Minus
Query 34525 ATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGC 34584
|||||||| || | ||| || | |||| || | |||||||| ||||| || ||||||
Sbjct 5015 ATGTTATAGTCCGTAAGAGTCCTGCCGTCCTCCAACTGTTTACCAGCAAAGATCAAACGC 4956
Query 34585 TGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTG 34644
| ||||| ||||| | |||||||||||| |||| |||| ||| || | | ||
Sbjct 4955 TACTGGTCTGGCGGGATACCCTCCTTGTCTTGGATC-TTTGCTTTGACATTGTCAATGGT 4897
Query 34645 TCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGC 34704
|| ||||| || |||| ||||| || || || || || || || ||||||||||||
Sbjct 4896 TCAGAACTCTCAACCTCCAAAGTTATTGTCTTCCCAGTCAAAGTCTTGACAAAAATCTGC 4837
Query 34705 ATG 34707
|||
Sbjct 4836 ATG 4834
Score = 86.0 bits (94), Expect = 4e-12
Identities = 143/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
|| || ||| |||||| || ||||| || || | ||| |||| |||||||||||
Sbjct 4582 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCTACTATCTTCAAGTTGC 4523
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| || ||||| || || | ||||| || || || | |||||||| || |||| ||
Sbjct 4522 TTGCCAGCAAAAATCAACCTTTGTTGATCAGGAGGAATACCCTCCTTATCCTGGATC-TT 4464
Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
|| || || | ||| |||||| |||||| || || | || || || || |||||
Sbjct 4463 TGCCTTGACATTGTCAATGGTGTCTGAGCTCTCGACCTCAAGCGTAATAGTCTTTCCGGT 4404
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
| ||||| ||||| || |||||
Sbjct 4403 CAGAGTTTTAACAAAGATTTGCAT 4380
>seq58802
Length=2471
Score = 98.7 bits (108), Expect = 6e-16
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || || | |||||| |||||||||||||| ||||||||| |||||||| || | |
Sbjct 1922 CCTCCCCTCAAACGCAAGACCAAATGGAGAGTCGACTCCTTTTGGATGTTATAGTCCGCA 1863
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
| || | |||| || || |||||||| ||||| || |||||||| ||||| |||||
Sbjct 1862 ATAGTCCTACCGTCCTCCAGCTGTTTACCAGCAAAAATCAAACGCTGCTGGTCTGGCGG 1804
>seq157592
Length=32097
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || || || | || |||||| || || ||| |||||| |||||||| || || | |
Sbjct 24197 CCTCCCCTCAGCCTCAGCACCAAGTGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGCA 24256
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | ||||| | || || || ||||| || | | ||| ||||| || ||
Sbjct 24257 AGGGTGCGACCATCTTCCAACTGCTTTCCTGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 24316
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||| || | || ||| | ||| ||||| || || ||
Sbjct 24317 ATCCCCTCCTTGTCCTGGATC-TTGGCCTTGACGTTGTCAATAGTGTCAGAACTTTCAAC 24375
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| ||| || || || || || | ||||| || |||||||||||
Sbjct 24376 CTCCAGGGTGATGGTCTTTCCAGTGAGGGTTTTGACGAAAATCTGCAT 24423
>seq182284
Length=106024
Score = 89.7 bits (98), Expect = 3e-13
Identities = 146/208 (70%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562
|||||| ||| |||||| || ||| | || || | |||||||| | || ||||| ||
Sbjct 1226 ATGGAGGGTGGACTCCTTCTGGATGCTGTAGTCAGCTAGTGTTCGGCCATCCTCAAGCTG 1285
Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622
||||| || || || || ||||| |||||||| || | ||||||||||| ||| |
Sbjct 1286 CTTACCTGCGAAAATCAACCGCTGGTGGTCCGGTGGAATGCCCTCCTTGTC-CTGAATCT 1344
Query 34623 TTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681
| | ||||| | ||| ||||| | ||| || || | ||| || || || || |
Sbjct 1345 TAGCCTTAACATTGTCAATGGTGTCCTATGACTCTACCTCTAAGGTAATAGTCTTCCCCG 1404
Query 34682 TTAACGTTTTCACAAAAATCTGCATGTT 34709
| | || ||||| || |||||||| ||
Sbjct 1405 TCAGGGTCTTCACGAATATCTGCATCTT 1432
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 313755629714894
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |