Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20sylvestris_20[refseq_20GCF_5F000393655.1_202013-05-16]
253,918 sequences; 2,221,987,173 total letters
Query= NC_029046.1
Length=50827
Score E
Sequences producing significant alignments: (Bits) Value
seq253918 82.4 2e-11
seq191101 82.4 2e-11
seq91392 82.4 2e-11
>seq253918
Length=155941
Score = 82.4 bits (90), Expect = 2e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209
||| ||||||||| |||||||||| ||||||||||| |||||| | ||||| ||||
Sbjct 38429 CGGGGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 38370
Query 21210 CTGTCTCCGCAAC 21222
|||||||||||||
Sbjct 38369 CTGTCTCCGCAAC 38357
>seq191101
Length=17662
Score = 82.4 bits (90), Expect = 2e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209
||| ||||||||| |||||||||| ||||||||||| |||||| | ||||| ||||
Sbjct 15050 CGGGGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 15109
Query 21210 CTGTCTCCGCAAC 21222
|||||||||||||
Sbjct 15110 CTGTCTCCGCAAC 15122
>seq91392
Length=128555
Score = 82.4 bits (90), Expect = 2e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209
||| ||||||||| |||||||||| ||||||||||| |||||| | ||||| ||||
Sbjct 39210 CGGGGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 39269
Query 21210 CTGTCTCCGCAAC 21222
|||||||||||||
Sbjct 39270 CTGTCTCCGCAAC 39282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 162034742830524
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |