Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tabacum_20[refseq_20GCF_5F000715135.1_202014-05-29] 168,247 sequences; 3,643,471,356 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq136437 89.7 4e-13 seq134413 86.0 5e-12 >seq136437 Length=81513 Score = 89.7 bits (98), Expect = 4e-13 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 20452 GAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAAT 20511 || || || ||||| |||||||| ||||| ||||||||||| ||||| || || || || Sbjct 23542 GAGTTATCCTGTCAGATGTATCAGCGATCTGCTGATATGGGTCTGGGAGTGCCATTTAAC 23601 Query 20512 ATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTT 20553 |||||| ||||||| |||| || | ||||| || |||||| Sbjct 23602 ATTGCATCTTATGCGTTGCTGACATGCATGATAGCTCATGTT 23643 >seq134413 Length=102786 Score = 86.0 bits (94), Expect = 5e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 20452 GAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAAT 20511 || || || ||||| |||||||| ||||| ||||||||||| ||||| || || || || Sbjct 2743 GAGTTATCCTGTCAGATGTATCAGCGATCTGCTGATATGGGTCTGGGAGTGCCATTTAAC 2684 Query 20512 ATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTT 20553 |||||| |||||| |||| || | ||||| || |||||| Sbjct 2683 ATTGCATCTTATGCCTTGCTGACATGCATGATAGCTCATGTT 2642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398365469091415