Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tabacum_20[refseq_20GCF_5F000715135.1_202014-05-29] 168,247 sequences; 3,643,471,356 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq129139 125 5e-24 seq142367 122 6e-23 seq126260 122 6e-23 seq118583 109 4e-19 seq86621 109 4e-19 seq80051 109 4e-19 seq162580 96.9 2e-15 seq121930 95.1 9e-15 seq379 95.1 9e-15 seq23306 86.0 4e-12 seq156999 82.4 5e-11 seq58462 82.4 5e-11 seq48865 82.4 5e-11 >seq129139 Length=45594 Score = 125 bits (138), Expect = 5e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||| ||| ||||||| ||||| || ||||||||||| ||||| || | | Sbjct 31107 AATGCAAATCTTTGTTAAAACCTTAACAGGGAAAACCATTACATTGGAAGTTGAGAGCTC 31166 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || || | | || ||||| ||||| ||||| || ||| | || | |||| Sbjct 31167 GGACACAATTGATAATGTTAAGACGAAAATCCAAGATAAGGAAGGTATCCCGCCAGACCA 31226 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 ||||| || || |||||||| || ||| |||||||| || |||| |||| ||||| || Sbjct 31227 GCAGAGGCTGATTTTTGCTGGGAAGCAATTAGAAGATGGAAGAACTCTGGCTGATTATAA 31286 Query 22013 TATTCAGAAGGAATCTACTCTTCA 22036 || ||||||||||| |||||||| Sbjct 31287 CATCCAGAAGGAATCCACTCTTCA 31310 Score = 95.1 bits (104), Expect = 9e-15 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||| || ||||||| ||||| || || ||||| || ||||| || | | Sbjct 31791 AATGCAAATCTTCGTTAAAACTTTAACAGGAAAGACCATCACACTGGAAGTTGAGAGCTC 31850 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 ||| ||| | | | || | ||| || || ||||| ||||| | || |||| Sbjct 31851 AGACACGATTGACAATGTGAAGGCGAAGATACAGGATAAGGAGGGAATTCCACCGGACCA 31910 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 ||||| || ||||||||||| ||||| | || ||| | || ||||||| ||||| Sbjct 31911 GCAGAGGCTCATCTTTGCTGGAAAACAGTTGGAGGATGGTAGGACACTGGCCGACTACAA 31970 Query 22013 TATTCAGAAGGAATCTACTCTTCAT 22037 ||| |||||||| ||||| || ||| Sbjct 31971 TATCCAGAAGGAGTCTACGCTCCAT 31995 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| | | ||||||| || || || ||||| || || ||||| ||| | | Sbjct 30880 ATGCAAATTTCTGTTAAAACCTTGACTGGGAAAACAATCACATTGGAAGTCGAAAGCTCG 30939 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || ||| | | || ||||| ||||| ||||| || ||| |||| | | ||| Sbjct 30940 GACACGATTGATAATGTTAAGGCCAAAATCCAAGATAAGGAAGGTATACCACCAGATCAA 30999 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | | |||||||| || ||||| || || ||| | ||| | || ||||||||| Sbjct 31000 CAACGTTTGATCTTTGCAGGAAAACAGCTCGAGGATGGACGGACTCTCGCGGATTACAAT 31059 Query 22014 ATTCAGAAGGAATCTACTCTTCA 22036 ||||||||||| || || || || Sbjct 31060 ATTCAGAAGGAGTCAACACTCCA 31082 >seq142367 Length=42869 Score = 122 bits (134), Expect = 6e-23 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||| ||| ||||||| |||||||| |||||||| || | ||| || | | Sbjct 794 AATGCAAATCTTTGTTAAAACCTTAACGGGAAAAACCATCACATTAGAAGTTGAGAGCTC 735 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 ||| ||| | | | || | ||| || ||| ||||| |||||| | || | |||| Sbjct 734 AGACACGATTGACAATGTGAAGGCGAAGATTCAGGATAAGGAGGGTATTCCACCAGACCA 675 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 ||||| |||||||||||||| || || | || ||| | || | || |||||||| Sbjct 674 GCAGAGGCTTATCTTTGCTGGGAAGCAGTTGGAGGATGGTAGGACACTTGCAGATTACAA 615 Query 22013 TATTCAGAAGGAATCTACTCTTCAT 22037 |||||||||||| |||||||| ||| Sbjct 614 TATTCAGAAGGAGTCTACTCTCCAT 590 Score = 120 bits (132), Expect = 2e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||| ||| ||||||| ||||| || ||||||||||| ||||| || | | Sbjct 1478 AATGCAAATCTTTGTTAAAACCTTAACTGGGAAAACCATTACATTGGAAGTTGAGAGCTC 1419 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 ||| || | | || ||||| ||||| ||||| || ||| | || | |||| Sbjct 1418 AGACACAATTGATAATGTTAAGGCGAAAATCCAAGATAAGGAAGGTATCCCGCCAGACCA 1359 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 ||||| || || || ||||| || ||| |||||||| || ||| |||| ||||| || Sbjct 1358 GCAGAGGCTGATTTTCGCTGGGAAGCAATTAGAAGATGGAAGAACGCTGGCTGATTATAA 1299 Query 22013 TATTCAGAAGGAATCTACTCTTCA 22036 || |||||||||||||| ||||| Sbjct 1298 CATCCAGAAGGAATCTACCCTTCA 1275 Score = 114 bits (126), Expect = 9e-21 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| ||||||| ||||| || ||||||||||| ||||| || | || Sbjct 2389 ATGCAGATCTTTGTTAAAACCTTAACTGGGAAAACCATTACATTGGAAGTTGAGAGCTCA 2330 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || ||||| ||||| ||||| || ||| | || | |||| Sbjct 2329 GACACAATTGATAATGTTAAGGCGAAAATCCAAGATAAGGAAGGTATCCCGCCAGACCAG 2270 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| || || || ||||| || ||| |||||||| || ||| |||| ||||| || Sbjct 2269 CAGAGGCTGATTTTCGCTGGGAAGCAATTAGAAGATGGAAGAACGCTGGCTGATTATAAC 2210 Query 22014 ATTCAGAAGGAATCTACTCTTCA 22036 || |||||||||||||| ||||| Sbjct 2209 ATCCAGAAGGAATCTACCCTTCA 2187 >seq126260 Length=96127 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| ||||||| ||||||||||| || || ||| | ||| || | || Sbjct 62171 ATGCAGATTTTTGTTAAAACTTTAACGGGCAAGACGATCACCCTTGAAGTTGAGAGCTCA 62112 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || | ||| ||| || || || |||||| | ||| | |||| Sbjct 62111 GATACCATCGACAATGTAAAGGCAAAGATCCAGGACAAGGAGGGTATTCCTCCAGACCAG 62052 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| | || |||||||| |||||||| || ||| || || | || ||||||||| Sbjct 62051 CAGAGGTTGATATTTGCTGGGAAACAACTTGAGGATGGAAGGACCCTTGCAGATTACAAT 61992 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||||||||||| || |||||| |||| | ||| | | ||||| Sbjct 61991 ATTCAGAAGGAATCAACCCTTCATTTGGTGCTTCGTCTGAGGGGAGG 61945 >seq118583 Length=73751 Score = 109 bits (120), Expect = 4e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||| ||| ||||||| |||||||| || ||||| || ||||| || | | Sbjct 38438 AATGCAAATCTTTGTTAAAACCTTAACGGGAAAGACCATCACATTGGAAGTTGAGAGCTC 38379 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 ||| ||| | | | || | ||| || || |||||||| ||| | || |||| Sbjct 38378 AGACACGATTGACAATGTGAAGGCGAAGATACAGGATAAAGAAGGTATTCCACCGGACCA 38319 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 ||||| || ||||||||||| ||||| | || ||| | || |||| || ||||| Sbjct 38318 GCAGAGGCTCATCTTTGCTGGAAAACAGTTGGAGGATGGTAGGACACTGGCGGACTACAA 38259 Query 22013 TATTCAGAAGGAATCTACTCTTCAT 22037 ||| |||||||| |||||||| ||| Sbjct 38258 TATCCAGAAGGAGTCTACTCTCCAT 38234 Score = 104 bits (114), Expect = 2e-17 Identities = 148/207 (71%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||| ||| |||| || ||||| || ||||| || || |||| || | | Sbjct 39350 AATGCAAATTTTTGTTAAGACCTTAACTGGAAAAACAATCACGTTGGAGGTTGAGAGCTC 39291 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAA 21949 || ||| | | | || ||||| |||||| || || |||||| | ||||| | Sbjct 39290 GGACACGATAGACAATGTTAAGGCTAAAATTCAAGACAAGGAGGGTATCCCACCTG---A 39234 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 || ||||| | || |||||||| || ||| |||||||| || |||| |||| ||||| Sbjct 39233 TCAGCAGAGGTTGATTTTTGCTGGGAAGCAATTAGAAGATGGAAGAACTCTGGCTGATTA 39174 Query 22010 CAATATTCAGAAGGAATCTACTCTTCA 22036 || || ||||||||||| || ||||| Sbjct 39173 TAACATCCAGAAGGAATCCACCCTTCA 39147 Score = 91.5 bits (100), Expect = 1e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 ||||| |||||| | || | |||| |||||||| || ||||| || |||||| | ||| Sbjct 39028 GATAAGGAGGGTATCCCACCAGACCAGCAGAGACTGATTTTTGCAGGGAAACAATTGGAA 38969 Query 21987 GATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCA 22036 ||| || ||| | || ||||| |||||||| ||||||||||| ||||| Sbjct 38968 GATGGAAGGACTCTCGCAGATTATAATATTCAAAAGGAATCTACCCTTCA 38919 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||| ||| ||||||| |||||||| || ||||| || ||||| || | | Sbjct 38666 AATGCAAATCTTTGTTAAAACCTTAACGGGAAAGACCATCACATTGGAAGTTGAGAGCTC 38607 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 ||| ||| | | | || | ||| || || |||||||| ||| | || |||| Sbjct 38606 AGACACGATTGACAATGTGAAGGCGAAGATACAGGATAAAGAAGGTATTCCACCGGACCA 38547 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 ||||| || ||||||||||| ||||| | || ||| | || | || || || || Sbjct 38546 GCAGAGGCTCATCTTTGCTGGAAAACAGTTGGAGGATGGTAGGACACTTGCTGACTATAA 38487 Query 22013 TATTCAGAAGGAATCTACTCTTCA 22036 ||||| ||||| || || || || Sbjct 38486 CATTCAAAAGGAGTCAACACTCCA 38463 >seq86621 Length=111109 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||| || ||||||| |||||||| |||||||| || ||||| || | | Sbjct 92276 AATGCAAATCTTCGTTAAAACCTTAACGGGAAAAACCATCACATTGGAAGTTGAGAGCTC 92335 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 ||| ||| | | | || | ||| || || |||||||| ||| |||| |||| Sbjct 92336 AGACACGATTGACAATGTGAAGGCGAAGATACAGGATAAAGAAGGTATACCACCGGACCA 92395 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 ||||| || ||||||||||| || || | || ||| | || |||| |||||||| Sbjct 92396 GCAGAGGCTCATCTTTGCTGGAAAGCAGTTGGAGGATGGTAGGACCCTGGCTGATTACAA 92455 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||| |||||||| ||||| || ||| | || || Sbjct 92456 TATCCAGAAGGAGTCTACACTCCATCTTGTGTT 92488 Score = 107 bits (118), Expect = 1e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||| ||| |||| || ||||| || ||||| || || ||||| || | | Sbjct 91820 AATGCAAATTTTTGTTAAGACCTTAACTGGAAAAACAATCACGTTGGAAGTTGAGAGCTC 91879 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || ||| | | | || ||||| |||||| || || |||||| | || | || Sbjct 91880 GGACACGATAGACAATGTTAAGGCTAAAATTCAAGACAAGGAGGGTATCCCACCGGATCA 91939 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 ||||| || || |||||||| || ||| |||||||| | |||| |||| ||||| || Sbjct 91940 GCAGAGGCTGATTTTTGCTGGGAAGCAATTAGAAGATGGACGAACTCTGGCTGATTATAA 91999 Query 22013 TATTCAGAAGGAATCTACTCTTCA 22036 || ||||||||||| || ||||| Sbjct 92000 CATCCAGAAGGAATCCACCCTTCA 92023 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||||||| |||| ||||| || || ||||| || || ||||| || | | Sbjct 91592 AATGCAAATATTTGTTAAGACATTGACTGGAAAAACAATCACATTGGAAGTTGAGAGCAC 91651 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || || | | | ||||| |||||| ||||| || ||| | || |||| Sbjct 91652 GGACACTATTGATAACGTTAAGGCGAAAATTCAAGATAAGGAAGGTATTCCACCGGACCA 91711 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 ||| || || || |||||||| || ||| | |||||| ||| |||| ||||| || Sbjct 91712 ACAAAGGCTGATTTTTGCTGGGAAGCAATTGGAAGATGGGCGCACTCTGGCAGATTATAA 91771 Query 22013 TATTCAGAAGGAATCTACTCTTCA 22036 |||||| ||||| || || || || Sbjct 91772 TATTCAAAAGGAGTCAACGCTCCA 91795 >seq80051 Length=167733 Score = 109 bits (120), Expect = 4e-19 Identities = 163/231 (71%), Gaps = 3/231 (1%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| |||| ||| |||| || || |||||||| | || || | | Sbjct 411 ATGCAAATCTTTGTTAAGACACTAACTGGAAAGACCATTACACTCGA---GGTTAACTCC 467 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || |||| ||||||| || || || || | ||| | | ||| Sbjct 468 GACACTATTGACAATGTTAAAACAAAAATTCAAGACAAGGAAGGAATTCCTCCAGATCAA 527 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || || | || |||||||| |||||||| |||||| ||| | || ||||||||| Sbjct 528 CAAAGGTTAATTTTTGCTGGAAAACAACTTGAAGATGGTCGAACACTTGCTGATTACAAT 587 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATAT 22064 |||||||||||||| ||||| ||| | || || ||| | || ||||| ||| Sbjct 588 ATTCAGAAGGAATCCACTCTCCATCTTGTGTTGCGTCTTCGCGGAGGTTAT 638 >seq162580 Length=72030 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || || | ||||| ||||| || ||||| || ||| | ||| ||| | | Sbjct 31707 ATGCAGATTTTCGTCAAAACCTTAACTGGGAAAACAATCACCCTTGAAGTCGAAAGCTCC 31648 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || ||||| ||||| ||||| ||||| | || | |||| Sbjct 31647 GACACTATTGACAATGTTAAGGCTAAAATCCAGGATAAGGAGGGAATCCCACCAGACCAG 31588 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || || | || |||||||| || ||| | |||||| || || | || ||||||||| Sbjct 31587 CAAAGGTTGATTTTTGCTGGTAAGCAATTGGAAGATGGAAGGACCTTAGCTGATTACAAT 31528 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 ||||||||||| || |||||||| |||| | ||| | || || ||| Sbjct 31527 ATTCAGAAGGAGTCGACTCTTCACTTGGTGCTCCGTCTTCGTGGTGGA 31480 >seq121930 Length=130577 Score = 95.1 bits (104), Expect = 9e-15 Identities = 149/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | ||||| || || || ||||| ||||| | ||| || | | Sbjct 39951 ATGCAAATCTTTGTGAAAACCTTGACCGGGAAAACTATTACTCTTGAAGTTGAGAGCTCG 39892 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAAC 21950 || || | | | || ||||| ||||||| ||||| || || | ||||| || Sbjct 39891 GACACCATCGACAATGTTAAGGCAAAAATTCAAGATAAGGAAGGGATTCCACCTG---AC 39835 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 || ||||| ||||| |||||||| || || || || ||| || || | || |||||| Sbjct 39834 CAGCAGAGGCTTATTTTTGCTGGGAAGCAGCTTGAGGATGGAAGGACACTAGCTGATTAC 39775 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGT 22042 || || ||||||||||| || || ||| |||| Sbjct 39774 AACATCCAGAAGGAATCAACCCTCCATTTGGT 39743 >seq379 Length=4922 Score = 95.1 bits (104), Expect = 9e-15 Identities = 149/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | ||||| || || || ||||| ||||| | ||| || | | Sbjct 4810 ATGCAAATCTTTGTGAAAACCTTGACTGGGAAAACTATTACTCTTGAAGTCGAGAGCTCG 4751 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAAC 21950 || || | | | || | ||| ||| ||| ||||| || || | ||||| || Sbjct 4750 GACACCATCGACAATGTAAAGGCAAAGATTCAAGATAAGGAAGGGATTCCACCTG---AC 4694 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 || ||||| ||||| |||||||| || || || |||||| || || | || |||||| Sbjct 4693 CAGCAGAGGCTTATTTTTGCTGGGAAGCAGCTTGAAGATGGAAGGACACTAGCTGATTAC 4634 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGT 22042 ||||| ||||||||||| || || ||| |||| Sbjct 4633 AATATCCAGAAGGAATCCACCCTCCATCTGGT 4602 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | || |||||||| || |||||||||||| | || || | | Sbjct 4582 ATGCAAATCTTTGTGAAGACATTAACAGGGAAAACCATTACCCTTGAGGTTGAGAGCTCG 4523 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAAC 21950 || || | | | || | ||| |||||| ||||| || || | ||||| || Sbjct 4522 GACACCATCGACAATGTCAAGGCTAAAATTCAAGATAAGGAAGGGATCCCACCTG---AC 4466 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 || ||||| | || |||||||| ||||| || || ||| || ||| | || ||||| Sbjct 4465 CAGCAGAGGTTGATTTTTGCTGGTAAACAGCTTGAGGATGGAAGGACTTTAGCTGATTAT 4406 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGT 22042 || || ||||||||||| || || ||| |||| Sbjct 4405 AACATCCAGAAGGAATCAACCCTCCATTTGGT 4374 >seq23306 Length=7682 Score = 86.0 bits (94), Expect = 4e-12 Identities = 159/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| |||| ||| | || || || |||||||| | || || | | Sbjct 4725 ATGCAAATCTTTGTTAAGACACTCACAGGAAAGACCATTACACTCGAGGTTGAGAGCTCG 4666 Query 21894 GAAACGGTGGCCGA-TCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || || | | | | |||| ||||||| || || || || | ||| | | || Sbjct 4665 GACACCATTGATAAATGTTAAAACAAAAATTCAAGACAAGGAAGGAATTCCTCCAGATCA 4606 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 ||| || | || |||||||| |||||||| || ||| ||| | || |||||||| Sbjct 4605 ACAAAGGTTAATTTTTGCTGGAAAACAACTCGAGGATGGTCGAACACTTGCTGATTACAA 4546 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATAT 22064 ||| ||||||||||| ||||| ||| | || || ||| | || ||||| ||| Sbjct 4545 TATCCAGAAGGAATCCACTCTCCATCTTGTGTTGCGTCTTCGCGGAGGTTAT 4494 >seq156999 Length=15918 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| ||||||| | || || || || ||||| | || || | || Sbjct 7706 ATGCAAATCTTTGTTAAAACTCTGACCGGAAAGACTATTACGCTTGAGGTCGAGAGCTCA 7765 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || | ||| ||| || ||||| |||||| | ||| | ||| Sbjct 7766 GACACCATTGACAATGTCAAGGCAAAGATCCAGGATAAGGAGGGTATTCCTCCTGATCAA 7825 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || || | || ||||||||||| ||||| |||||| | |||| | || || ||||| Sbjct 7826 CAAAGGTTGATTTTTGCTGGCAAGCAACTTGAAGATAGTAGAACTCTTGCTGACTACAAC 7885 Query 22014 ATTCAGAAGGAATCTACTCTTCA 22036 || |||||||| || || ||||| Sbjct 7886 ATCCAGAAGGAGTCCACCCTTCA 7908 >seq58462 Length=37098 Score = 82.4 bits (90), Expect = 5e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 |||||||| || ||||| | || |||||||| || |||||||| ||||| | ||| Sbjct 13187 GATAAAGAAGGCATACCTCCTGATCAGCAGAGACTGATTTTTGCTGGGAAACAGTTGGAA 13246 Query 21987 GATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCA 22036 ||| || |||| ||||||||||||||||| ||||| |||||||| Sbjct 13247 GATGGTCGGACCCTGGCTGATTACAATATTCAGAAAGAATCAACTCTTCA 13296 >seq48865 Length=263615 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 || ||||| || ||||| |||| ||||| || || |||||||| ||||| | ||| Sbjct 56406 GACAAAGAAGGGATACCTCCTGACCAGCAGAGGCTGATTTTTGCTGGAAAACAGTTGGAA 56347 Query 21987 GATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTA 22046 ||| |||| |||| ||||||||||| ||||| ||||| || ||||| |||| || Sbjct 56346 GATGGTCGAACTCTGGCTGATTACAATATCCAGAAAGAATCAACACTTCACCTGGTTTTG 56287 Query 22047 CGTTTACGAGGAGGA 22061 | | |||||||| Sbjct 56286 AGGCTCAGAGGAGGA 56272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357390461404438