Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20tabacum_20[refseq_20GCF_5F000715135.1_202014-05-29]
168,247 sequences; 3,643,471,356 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq162580 140 6e-28
seq379 127 4e-24
seq86621 120 5e-22
seq142367 116 7e-21
seq129139 114 2e-20
seq80051 113 8e-20
seq27789 113 8e-20
seq126260 104 4e-17
seq66466 104 4e-17
seq156841 100 5e-16
seq133954 100 5e-16
seq121930 100 5e-16
seq119769 100 5e-16
seq118583 100 5e-16
seq23306 98.7 2e-15
seq144114 95.1 2e-14
seq80500 95.1 2e-14
seq64032 89.7 9e-13
seq115373 87.8 3e-12
seq6766 84.2 4e-11
>seq162580
Length=72030
Score = 140 bits (154), Expect = 6e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| ||||| | ||| || | || || || | ||| | ||| || |||||| |||||
Sbjct 31478 ATTCCACCACGAAGACGGAGCACCAAGTGAAGAGTCGACTCCTTCTGAATATTGTAATCA 31537
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| ||| | | | | || |||||||| |||||||||||||| || || || ||||| |||
Sbjct 31538 GCTAAGGTCCTTCCATCTTCCAATTGCTTACCAGCAAAAATCAACCTTTGCTGGTCTGGT 31597
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||| || ||||| || |||||| || ||||| ||||| || || |||
Sbjct 31598 GGGATTCCCTCCTTATCCTGGATTTTAGCCTTAACATTGTCAATAGTGTCGGAGCTTTCG 31657
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| || || || ||||| |||||||| ||||| | ||| ||||||||
Sbjct 31658 ACTTCAAGGGTGATTGTTTTCCCAGTTAAGGTTTTGACGAAAATCTGCAT 31707
>seq379
Length=4922
Score = 127 bits (140), Expect = 4e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| || || || | || ||||| | || | || || || ||||||||
Sbjct 4353 ATACCACCCCTCAGGCGCAGCACCAAATGGAGGGTTGATTCCTTCTGGATGTTATAATCA 4412
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| ||||| | | | || || | ||||||||||||||||| || ||||| |||||||||
Sbjct 4413 GCTAAAGTCCTTCCATCCTCAAGCTGTTTACCAGCAAAAATCAACCTCTGCTGGTCAGGT 4472
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| |||||||| |||||| || ||||| || || || || ||
Sbjct 4473 GGGATCCCTTCCTTATCTTGAATTTTAGCCTTGACATTGTCGATGGTGTCCGAGCTCTCA 4532
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || ||||||||||| || |||||||| || | || || |||||
Sbjct 4533 ACCTCAAGGGTAATGGTTTTCCCTGTTAATGTCTTCACAAAGATTTGCAT 4582
Score = 104 bits (114), Expect = 4e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| || ||||| | ||| | || ||||| | || | |||||| || ||||||||
Sbjct 4125 ATCCCTCCTCTCAATCGGAGCACCAAATGGAGTGTGGACTCTTTCTGGATGTTATAATCA 4184
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| | || | | || || | ||| || ||||||||||| || ||||| |||||||||
Sbjct 4185 GCAAGAGTCCTCCCATCCTCAAGTTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCAGGT 4244
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| |||||||| |||||| || ||||| || || || || ||
Sbjct 4245 GGGATCCCTTCCTTATCTTGAATTTTAGCCTTGACATTGTCGATGGTGTCGGAACTCTCA 4304
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || || ||||| || || ||||| || | || ||||||||
Sbjct 4305 ACCTCAAGGGTGATAGTTTTCCCTGTCAATGTCTTCACAAAGATCTGCAT 4354
Score = 98.7 bits (108), Expect = 2e-15
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
||||| ||||| | || | | | | || || | || || ||||||||||| | |||
Sbjct 4629 ATATTGTAATCAGCTAGTGTCCTTCCATCTTCAAGCTGCTTCCCAGCAAAAATAAGCCTC 4688
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|| ||||||||||| || ||||| |||||||| || || |||||||| || ||
Sbjct 4689 TGCTGGTCAGGTGGAATCCCTTCCTTATCTTGAATCTTTGCCTTTACATTGTCGATGGTG 4748
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
|| || || ||||| |||||||| ||||| ||||| || ||||| | || || |||
Sbjct 4749 TCCGAGCTCTCGACTTCAAGAGTAATAGTTTTCCCAGTCAAGGTTTTCACAAAGATTTGC 4808
Query 172068 AT 172069
||
Sbjct 4809 AT 4810
>seq86621
Length=111109
Score = 120 bits (132), Expect = 5e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| ||||| | ||| || | |||| || | || | ||| || |||||||||||||
Sbjct 91822 ATTCCACCACGAAGGCGAAGGACTAGGTGGAGCGTTGACTCCTTTTGAATATTATAATCT 91763
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| | || || | || |||||||| || ||||||||||| | || |||||||| |||
Sbjct 91762 GCCAGAGTGCGCCCATCTTCCAATTGCTTCCCAGCAAAAATCAGCCTTTGTTGGTCCGGT 91703
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| |||||||| ||||| || || ||| ||||| || | ||
Sbjct 91702 GGAATACCTTCCTTATCTTGAATTTTCGCCTTAACGTTATCAATAGTGTCCGTGCTCTCA 91643
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| | || || ||||| ||||| ||||| |||| ||||| ||||||
Sbjct 91642 ACTTCCAATGTGATTGTTTTTCCAGTCAATGTCTTAACAAATATTTGCATT 91592
Score = 105 bits (116), Expect = 1e-17
Identities = 117/156 (75%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974
|| ||||| || || |||||||| || | ||||| ||||| |||||||| |||||||||
Sbjct 92431 TCCTCCAACTGCTTTCCAGCAAAGATGAGCCTCTGCTGGTCCGGTGGTATACCTTCTTTA 92372
Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034
|| ||||| || || ||||| || || ||||| || ||||| | || |||
Sbjct 92371 TCCTGTATCTTCGCCTTCACATTGTCAATCGTGTCTGAGCTCTCAACTTCCAATGTGATG 92312
Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| || ||||| ||||||| ||| || ||||||
Sbjct 92311 GTTTTTCCCGTTAAGGTTTTAACGAAGATTTGCATT 92276
Score = 100 bits (110), Expect = 5e-16
Identities = 132/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
|| |||||||| | | || |||| | || || ||||| || ||||||||||| | |||
Sbjct 92002 ATGTTATAATCAGCCAGAGTTCGTCCATCTTCTAATTGCTTCCCAGCAAAAATCAGCCTC 91943
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|| || || ||||| || || || || ||||| |||||| || ||||| ||| ||
Sbjct 91942 TGCTGATCCGGTGGGATACCCTCCTTGTCTTGAATTTTAGCCTTAACATTGTCTATCGTG 91883
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
|| || || ||||| | || || ||||| |||||||| || |||| || || |||
Sbjct 91882 TCCGAGCTCTCAACTTCCAACGTGATTGTTTTTCCAGTTAAGGTCTTAACAAAAATTTGC 91823
Query 172068 ATT 172070
|||
Sbjct 91822 ATT 91820
>seq142367
Length=42869
Score = 116 bits (128), Expect = 7e-21
Identities = 145/196 (74%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
|| |||||||| | | | || | | || || ||||| || ||||| ||||| | |||
Sbjct 2208 ATGTTATAATCAGCCAGCGTTCTTCCATCTTCTAATTGCTTCCCAGCGAAAATCAGCCTC 2267
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|| ||||| || || || ||||| |||||||| ||||| || |||||| || ||
Sbjct 2268 TGCTGGTCTGGCGGGATACCTTCCTTATCTTGGATTTTCGCCTTAACATTATCAATTGTG 2327
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
||||| || ||||| | ||||||||||| |||||||| ||||||| || ||||||
Sbjct 2328 TCTGAGCTCTCAACTTCCAATGTAATGGTTTTCCCAGTTAAGGTTTTAACAAAGATCTGC 2387
Query 172068 AT-TTTATT-ATAAAA 172081
|| | |||| ||||||
Sbjct 2388 ATCTGTATTAATAAAA 2403
Score = 109 bits (120), Expect = 1e-18
Identities = 134/183 (73%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
|| |||||||| | | | || | | || || ||||| || ||||| ||||| | |||
Sbjct 1296 ATGTTATAATCAGCCAGCGTTCTTCCATCTTCTAATTGCTTCCCAGCGAAAATCAGCCTC 1355
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|| ||||| || || || ||||| |||||||| ||||| || |||||| || ||
Sbjct 1356 TGCTGGTCTGGCGGGATACCTTCCTTATCTTGGATTTTCGCCTTAACATTATCAATTGTG 1415
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
||||| || ||||| | ||||||||||| |||||||| ||||||| || || |||
Sbjct 1416 TCTGAGCTCTCAACTTCCAATGTAATGGTTTTCCCAGTTAAGGTTTTAACAAAGATTTGC 1475
Query 172068 ATT 172070
|||
Sbjct 1476 ATT 1478
Score = 100 bits (110), Expect = 5e-16
Identities = 132/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
|||||||||||||| | || | ||| || ||||||||||| || |||||||||| |||
Sbjct 1067 AATATTATAATCTGCGAGAGTCCTTTCATCTTCCAATTGTTTCCCTGCAAAAATTAGTCT 1126
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
||| ||||| ||||| || || || ||||| ||||| || || ||||| || ||
Sbjct 1127 CTGCTGGTCTGGTGGGATACCCTCCTTATCCTGTATCTTGGCCTTCACATTGTCAATGGT 1186
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
||| || || || || | || || || || || || || || || | || |||||
Sbjct 1187 ATCAGAACTCTCCACCTCCAACGTGATCGTCTTCCCCGTCAACGTCTTCACAAAGATCTG 1246
Query 172067 CAT 172069
|||
Sbjct 1247 CAT 1249
Score = 96.9 bits (106), Expect = 6e-15
Identities = 131/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
|||||||||||||| | || | ||| || ||||||||||| || |||||||| | |||
Sbjct 1979 AATATTATAATCTGCGAGAGTCCTTTCATCTTCCAATTGTTTCCCTGCAAAAATCAGTCT 2038
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
||| ||||| ||||| || || || ||||| ||||| || || ||||| || ||
Sbjct 2039 CTGCTGGTCTGGTGGGATACCCTCCTTATCCTGTATCTTGGCCTTCACATTGTCAATGGT 2098
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
||| || || || || | || || || || || || || || || | || |||||
Sbjct 2099 ATCAGAACTCTCCACCTCCAACGTGATCGTCTTCCCCGTCAACGTCTTCACAAAGATCTG 2158
Query 172067 CAT 172069
|||
Sbjct 2159 CAT 2161
Score = 93.3 bits (102), Expect = 8e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| ||||| || || | | |||| || | ||| | ||| || |||||||||||||
Sbjct 1704 ATTCCACCCCTTAGCCTGAGAACTAGGTGGAGAGTTGACTCCTTTTGAATATTATAATCT 1763
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| | || || | || |||||||| || || ||||| || | ||||| || || |||
Sbjct 1764 GCGAGAGTACGCCCATCTTCCAATTGCTTCCCTGCAAATATCAGCCTCTGCTGATCCGGT 1823
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || ||||| ||||||||||| || || || || || || || ||
Sbjct 1824 GGGATACCCTCTTTGTCTTGTATTTTCGCCTTAACGTTGTCAATCGTGTCCGAGCTCTCA 1883
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| | || || ||||| || ||||| || |||| || || ||||||
Sbjct 1884 ACTTCCAATGTGATTGTTTTCCCGGTTAAGGTCTTAACAAAGATTTGCATT 1934
>seq129139
Length=45594
Score = 114 bits (126), Expect = 2e-20
Identities = 145/197 (74%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
||| |||||||||| | || || | || ||||||||||| || |||||||| | ||
Sbjct 30834 AATGTTATAATCTGCGAGAGTACGCCCATCTTCCAATTGTTTCCCTGCAAAAATCAGCCT 30775
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
||| || || || || || || || || ||||| ||||| || |||||| ||| ||
Sbjct 30774 CTGCTGATCCGGCGGGATACCCTCCTTGTCTTGAATTTTCGCCTTAACATTATCTATCGT 30715
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
|| || || ||||| || || |||||||| ||||||| ||||||| || |||||
Sbjct 30714 GTCCGAGCTTTGAACTTCCAGTGTGATGGTTTTTCCAGTTATGGTTTTAACAAAGATCTG 30655
Query 172067 CAT-TTTATT-ATAAAA 172081
||| | |||| ||||||
Sbjct 30654 CATCTGTATTAATAAAA 30638
Score = 114 bits (126), Expect = 2e-20
Identities = 135/183 (74%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
|| |||||||| | | || || | | || || ||||| || ||||||||||| | |||
Sbjct 31289 ATGTTATAATCAGCCAGAGTTCTTCCATCTTCTAATTGCTTCCCAGCAAAAATCAGCCTC 31230
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|| ||||| || || || ||||| |||||||| ||||| | || |||||| || ||
Sbjct 31229 TGCTGGTCTGGCGGGATACCTTCCTTATCTTGGATTTTCGTCTTAACATTATCAATTGTG 31170
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
|| || || ||||| | ||||||||||| || ||||| ||||||| || || |||
Sbjct 31169 TCCGAGCTCTCAACTTCCAATGTAATGGTTTTCCCTGTTAAGGTTTTAACAAAGATTTGC 31110
Query 172068 ATT 172070
|||
Sbjct 31109 ATT 31107
Score = 96.9 bits (106), Expect = 6e-15
Identities = 115/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974
|| ||||||||||| ||||||||||| | ||||| || || ||||| || ||||| |||
Sbjct 31718 TCTTCCAATTGTTTCCCAGCAAAAATCAGCCTCTGCTGATCCGGTGGAATGCCTTCCTTA 31659
Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034
||||| ||||| || ||||| || || || || || ||||| | || ||
Sbjct 31658 TCTTGAATTTTGGCCTTAACATTGTCAATCGTGTCCGAGCTCTCAACTTCCAACGTGATT 31599
Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| |||||||| || |||| || || ||||||
Sbjct 31598 GTTTTTCCAGTTAAGGTCTTAACAAAGATTTGCATT 31563
Score = 91.5 bits (100), Expect = 3e-13
Identities = 130/183 (71%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
|||||||||||||| | || | | | || ||||||||||| || |||||||| | |||
Sbjct 31518 AATATTATAATCTGCGAGAGTCCTTCCATCTTCCAATTGTTTCCCTGCAAAAATCAGTCT 31459
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
||| ||||| ||||| || || || ||||| ||||| || || ||||| || ||
Sbjct 31458 CTGCTGGTCTGGTGGGATACCCTCCTTATCCTGTATCTTGGCCTTCACATTGTCAATGGT 31399
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
||| || || || || | || || || || || || || || || | || |||||
Sbjct 31398 ATCAGAACTCTCCACCTCCAACGTGATCGTCTTCCCCGTCAACGTCTTCACAAAGATCTG 31339
Query 172067 CAT 172069
|||
Sbjct 31338 CAT 31336
>seq80051
Length=167733
Score = 113 bits (124), Expect = 8e-20
Identities = 162/228 (71%), Gaps = 3/228 (1%)
Strand=Plus/Minus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
||| || | ||| || || || | ||| | ||| | || || |||||| ||||| |
Sbjct 635 ACCTCCGCGAAGACGCAACACAAGATGGAGAGTGGATTCCTTCTGAATATTGTAATCAGC 576
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
| | ||| | || || | |||||| |||||||||||||| || ||||| || || ||
Sbjct 575 AAGTGTTCGACCATCTTCAAGTTGTTTTCCAGCAAAAATTAACCTTTGTTGATCTGGAGG 516
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
|||||||| || ||||| ||||| |||| ||||| ||||| || || | ||
Sbjct 515 AATTCCTTCCTTGTCTTGAATTTTTGTTTTAACATTGTCAATAGTGTC---GGAGTTAAC 459
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || |||||||| || ||||||| ||| |||| || || |||||
Sbjct 458 CTCGAGTGTAATGGTCTTTCCAGTTAGTGTCTTAACAAAGATTTGCAT 411
Score = 91.5 bits (100), Expect = 3e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
||| || | ||| ||||| || | ||| | || | || || ||| |||||||| |
Sbjct 3304 ACCTCCGCGAAGACGTAACACAAGATGGAGTGTGGATTCCTTCTGAATGTTATAATCAGC 3245
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
| | ||| | || || | |||||| ||||||||||| || || ||||| || | ||
Sbjct 3244 AAGTGTTCGACCATCCTCGAGTTGTTTTCCAGCAAAAATCAACCTTTGTTGATCTAGAGG 3185
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
|||||||| || ||||| || || |||| ||||| ||||| || || || ||
Sbjct 3184 AATTCCTTCCTTGTCTTGAATCTTTGTTTTAACATTGTCAATAGTGTCAGAACTCTCAAC 3125
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || ||||| || ||||| | || |||| || || |||||
Sbjct 3124 CTCGAGTGTTATGGTCTTTCCAGTGAGGGTCTTAACAAAGATTTGCAT 3077
>seq27789
Length=27798
Score = 113 bits (124), Expect = 8e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| ||||||||||| || | || | ||| | || | |||||| ||| || ||||||
Sbjct 5046 ATGCCACCTCTAAGACGAAGAACAAGATGCAGGGTTGACTCTTTCTGAATGTTGTAATCT 5105
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| || | | |||| || | ||| || || ||||| || | |||||| ||||| ||
Sbjct 5106 GCCAATGTCCTCCCGTCCTCAAGTTGCTTCCCGGCAAAGATCAGTCTCTGCTGGTCCGGA 5165
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| || || ||||||||| ||||||||||| |||
Sbjct 5166 GGAATACCTTCCTTGTCTTGAATCTTTGCTTTTACATTGTCGATAGTATCTGAACTTTCA 5225
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| || || ||||| || || || | ||| || | || ||||||||
Sbjct 5226 ACTTCAAGGGTGATGGTCTTGCCGGTAAGTGTCTTGACAAAGATCTGCAT 5275
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | || || | || | ||| | |||| ||| || || || || ||
Sbjct 5502 ATACCACCACGGAGACGGAGGACAAGATGGAGGGTAGACTCCTTTTGGATGTTGTAGTCA 5561
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| | || ||| | || || | ||||| |||||||| || | ||||| || |||||
Sbjct 5562 GCAAGAGTTCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGCCTCTGCTGATCAGGA 5621
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| || ||| ||| ||||| || || || || ||
Sbjct 5622 GGAATGCCTTCCTTGTCTTGAATCTTAGCTTTGACATTGTCAATGGTGTCAGAACTCTCG 5681
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || ||||||||||| || || || | ||| |||| || ||||||||
Sbjct 5682 ACCTCAAGAGTAATGGTCTTTCCGGTGAGTGTCTTAACAAAGATCTGCAT 5731
>seq126260
Length=96127
Score = 104 bits (114), Expect = 4e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 171873 GTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCA 171932
|||| ||| || |||||| ||||| | | || ||| | || || | || || |||
Sbjct 62203 GTAGACTCCTTTTGAATATTGTAATCAGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCA 62262
Query 171933 GCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTT 171992
||||| || | ||||| ||||| || || || ||||| || ||||| ||||| ||
Sbjct 62263 GCAAAGATCAGCCTCTGCTGGTCTGGGGGAATCCCTTCCTTGTCTTGAATTTTCGCCTTC 62322
Query 171993 ACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTT 172052
|| ||| || || ||||| || || || |||||||||||||| || || | ||||
Sbjct 62323 ACGTTATCAATTGTGTCTGAACTCTCGACCTCAAGAGTAATGGTTTTGCCGGTAAGTGTT 62382
Query 172053 TTAATGAATATCTGCAT 172069
|||| |||||||||||
Sbjct 62383 TTAACAAATATCTGCAT 62399
Score = 91.5 bits (100), Expect = 3e-13
Identities = 130/183 (71%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
|||||| ||||| | | || ||| | || || | || || |||||||| || | ||
Sbjct 62445 AATATTGTAATCAGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAGATCAGCCT 62504
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
||| ||||| || || || ||||| || ||||| ||||| || || ||| || ||
Sbjct 62505 CTGCTGGTCTGGGGGAATCCCTTCCTTGTCTTGAATTTTCGCCTTCACGTTATCAATTGT 62564
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
||||| || || || |||||||||||||| ||||| | ||| || | || |||||
Sbjct 62565 GTCTGAACTCTCAACCTCGAGAGTAATGGTTTTTCCAGTGAGTGTCTTTACAAAGATCTG 62624
Query 172067 CAT 172069
|||
Sbjct 62625 CAT 62627
Score = 89.7 bits (98), Expect = 9e-13
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
||||| ||||||| | | || | || |||| || ||||||||||| || | |||
Sbjct 61534 ATATTGTAATCTGCAAGGGTGCGCCCATCCTCCAGCTGCTTACCAGCAAATATGAGCCTC 61593
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|| || || ||||| || ||||||||||| || ||||| || || || |||||
Sbjct 61594 TGCTGATCTGGTGGGATCCCTTCTTTATCCTGAATTTTGGCCTTCACGTTGTCAATAGTG 61653
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
|| || || ||||| | ||| ||||| || || || || ||||| | |||||||||
Sbjct 61654 TCAGAGCTCTCCACTTCCAAAGTGATGGTCTTTCCTGTCAAAGTTTTGACAAATATCTGC 61713
Query 172068 AT 172069
||
Sbjct 61714 AT 61715
>seq66466
Length=51600
Score = 104 bits (114), Expect = 4e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| ||||| | ||| || | || | || ||||| | ||| || || || |||||
Sbjct 28378 ATCCCACCACGAAGACGAAGCACAAGGTGCAAAGTCGACTCCTTCTGGATGTTGTAATCA 28437
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| | | ||| | || ||||| |||||||||||||| || || ||||| || || |||
Sbjct 28438 GCGAGGGTTCGGCCATCTTCCAACTGTTTACCAGCAAATATCAACCTCTGCTGATCTGGT 28497
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| |||||||| || || || || ||| || ||||| ||||| || || |||
Sbjct 28498 GGGATTCCTTCCTTGTCCTGAATCTTAGCCTTAACATTGTCAATAGTGTCAGAGCTTTCA 28557
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| || || || ||||| || |||| ||||| | ||| || |||||
Sbjct 28558 ACTTCAAGGGTGATTGTTTTCCCGGTTAGGGTTTTGACGAAGATTTGCAT 28607
Score = 98.7 bits (108), Expect = 2e-15
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
|| || ||||| | || | ||| | || ||||| || ||||||||||| || || |||
Sbjct 28654 ATGTTGTAATCAGCTAGGGTTCGGCCATCTTCCAACTGCTTACCAGCAAATATCAACCTC 28713
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|| || || ||||| |||||||| || || || || ||| || ||||| |||||
Sbjct 28714 TGCTGATCTGGTGGGATTCCTTCCTTGTCCTGAATCTTAGCCTTAACATTGTCGATAGTG 28773
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
|| || ||| ||||| || || || ||||| || |||| ||||| | || ||||||
Sbjct 28774 TCAGAGCTTTCAACTTCAAGGGTGATTGTTTTCCCGGTTAGGGTTTTGACAAAGATCTGC 28833
Query 172068 AT 172069
||
Sbjct 28834 AT 28835
>seq156841
Length=49269
Score = 100 bits (110), Expect = 5e-16
Identities = 114/153 (75%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 39116 ATATAGTAAACATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACT 39175
||| || ||||| |||||||| || |||||||||||||| || || || || ||
Sbjct 12894 ATAAAGCAAACAAGCAAAATCACAGTGCAAACCTTCGTCCCTTGAAATTAACTCGTTCGA 12953
Query 39176 AAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACT 39235
||||||||||| |||||||| || | |||||| | ||| ||||| | || || |
Sbjct 12954 GAAAGTTAATCCAGGCATTAACCCCCGCTTTTTTAACCAGAATATAGCACAGAAGCTTCC 13013
Query 39236 AGAAAAGAATATACCCTCCACACACGCAAATGC 39268
||| || || ||||| |||||||| ||||| ||
Sbjct 13014 AGAGAAAAAAATACCTTCCACACAAGCAAAGGC 13046
>seq133954
Length=6269
Score = 100 bits (110), Expect = 5e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974
|| || | ||| || || ||||| || |||| ||| |||||||| || |||||||| ||
Sbjct 5655 TCTTCAAGTTGCTTCCCTGCAAATATCAATCGCTGCTGGTCAGGGGGAATTCCTTCCTTG 5714
Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034
||||| ||||| || || ||| || || ||||| || || || |||||||||
Sbjct 5715 TCTTGAATTTTGGCCTTCACGTTATCAATTGTGTCTGAACTCTCAACCTCGAGAGTAATG 5774
Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| ||||| | ||| || | |||||||||||
Sbjct 5775 GTTTTTCCAGTGAGTGTCTTTACAAATATCTGCAT 5809
Score = 86.0 bits (94), Expect = 1e-11
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
||||| ||||||| | | || | || |||| || ||||||||||| || | |||
Sbjct 5400 ATATTGTAATCTGCAAGGGTGCGCCCATCCTCCAGCTGCTTACCAGCAAATATGAGCCTC 5459
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|| || || ||||| || ||||||||||| || ||||| || || || |||||
Sbjct 5460 TGCTGATCTGGTGGGATCCCTTCTTTATCCTGAATTTTGGCCTTCACGTTGTCAATAGTG 5519
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
|| || || ||||| | ||| ||||| || || || || ||||| | || ||||||
Sbjct 5520 TCAGAGCTCTCCACTTCCAAAGTGATGGTCTTTCCTGTCAAAGTTTTGACAAAAATCTGC 5579
Query 172068 AT 172069
||
Sbjct 5580 AT 5581
>seq121930
Length=130577
Score = 100 bits (110), Expect = 5e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| ||||| || | || ||||| | || | || || || || |||||
Sbjct 39722 ATACCACCCCTAAGGCGCAGCACCAAATGGAGGGTTGATTCCTTCTGGATGTTGTAATCA 39781
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
| || | | | | || || | || || ||||||||||| | ||||| |||||||||
Sbjct 39782 GCTAGTGTCCTTCCATCCTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCAGGT 39841
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| |||||||| ||||| || ||||| || || || || ||
Sbjct 39842 GGAATCCCTTCCTTATCTTGAATTTTTGCCTTAACATTGTCGATGGTGTCCGAGCTCTCA 39901
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| |||||||| ||||| || || || ||||| | || || |||||
Sbjct 39902 ACTTCAAGAGTAATAGTTTTCCCGGTCAAGGTTTTCACAAAGATTTGCAT 39951
Score = 93.3 bits (102), Expect = 8e-14
Identities = 108/146 (74%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983
|| || ||||||||||| || ||||| ||||||||||| || ||||| |||||||| |||
Sbjct 39578 TGCTTCCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGGATCCCTTCCTTATCTTGAATT 39637
Query 171984 TTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 172043
||| || |||||| || || || || || || || || || || ||||| ||
Sbjct 39638 TTAGCCTTGACATTATCGATGGTGTCAGAACTCTCAACCTCAAGGGTGATAGTTTTCCCT 39697
Query 172044 GTTAATGTTTTAATGAATATCTGCAT 172069
|| | ||| || | || ||||||||
Sbjct 39698 GTCAGTGTCTTCACAAAGATCTGCAT 39723
Score = 86.0 bits (94), Expect = 1e-11
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974
|| || | ||| || |||||||| || || ||||| || || || || || |||||||||
Sbjct 40025 TCCTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGAGGAATGCCTTCTTTA 40084
Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034
|| || |||||| ||| ||||| || ||||| || || || || || |||||
Sbjct 40085 TCCTGGATTTTAGCTTTGACATTGTCAATTGTATCAGAACTCTCAACCTCAAGGGTAATA 40144
Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || || || ||||| | || ||||||||
Sbjct 40145 GTCTTTCCTGTCAAAGTTTTTACAAAGATCTGCAT 40179
>seq119769
Length=87979
Score = 100 bits (110), Expect = 5e-16
Identities = 114/153 (75%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 39116 ATATAGTAAACATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACT 39175
||| || ||||| |||||||| || |||||||||||||| || || || || ||
Sbjct 78886 ATAAAGCAAACAAGCAAAATCACAGTGCAAACCTTCGTCCCTTGAAATCAACTCGTTCGA 78827
Query 39176 AAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACT 39235
|| |||||||| |||||||| || | |||||| | ||| ||||| | || || |
Sbjct 78826 GAAGGTTAATCCAGGCATTAACCCCCGCTTTTTTAACCAGAATATAGCACAGAAGCTTCC 78767
Query 39236 AGAAAAGAATATACCCTCCACACACGCAAATGC 39268
||| || || ||||| |||||||| ||||||||
Sbjct 78766 AGAGAAAAAAATACCTTCCACACAAGCAAATGC 78734
>seq118583
Length=73751
Score = 100 bits (110), Expect = 5e-16
Identities = 132/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
|| |||||||| | | || || | | || || ||||| || ||||||||||| || |||
Sbjct 39168 ATGTTATAATCAGCCAGAGTTCTTCCATCTTCTAATTGCTTCCCAGCAAAAATCAACCTC 39227
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|| || |||||||| || || || || ||||| |||||| || ||||| ||| ||
Sbjct 39228 TGCTGATCAGGTGGGATACCCTCCTTGTCTTGAATTTTAGCCTTAACATTGTCTATCGTG 39287
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
|| || || || || | || || ||||| |||||||| || |||| || || |||
Sbjct 39288 TCCGAGCTCTCAACCTCCAACGTGATTGTTTTTCCAGTTAAGGTCTTAACAAAAATTTGC 39347
Query 172068 ATT 172070
|||
Sbjct 39348 ATT 39350
Score = 96.9 bits (106), Expect = 6e-15
Identities = 115/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974
|| ||||| ||||| |||||||| || | ||||| ||||| ||||| || |||||||||
Sbjct 38283 TCCTCCAACTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCCGGTGGAATACCTTCTTTA 38342
Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034
|| ||||| || || ||||| || || ||||| || ||||| | || |||
Sbjct 38343 TCCTGTATCTTCGCCTTCACATTGTCAATCGTGTCTGAGCTCTCAACTTCCAATGTGATG 38402
Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
|| || || ||||| ||||||| || || ||||||
Sbjct 38403 GTCTTTCCCGTTAAGGTTTTAACAAAGATTTGCATT 38438
Score = 96.9 bits (106), Expect = 6e-15
Identities = 115/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974
|| ||||| ||||| |||||||| || | ||||| ||||| ||||| || |||||||||
Sbjct 38511 TCCTCCAACTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCCGGTGGAATACCTTCTTTA 38570
Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034
|| ||||| || || ||||| || || ||||| || ||||| | || |||
Sbjct 38571 TCCTGTATCTTCGCCTTCACATTGTCAATCGTGTCTGAGCTCTCAACTTCCAATGTGATG 38630
Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
|| || || ||||| ||||||| || || ||||||
Sbjct 38631 GTCTTTCCCGTTAAGGTTTTAACAAAGATTTGCATT 38666
Score = 96.9 bits (106), Expect = 6e-15
Identities = 115/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974
|| ||||| ||||| |||||||| || | ||||| ||||| || || || |||||||||
Sbjct 38739 TCCTCCAACTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCCGGCGGAATACCTTCTTTA 38798
Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034
|| ||||| || || ||||| || || ||||| || ||||| | || |||
Sbjct 38799 TCCTGTATCTTCGCCTTCACATTGTCAATCGTGTCTGAGCTCTCAACTTCCAATGTGATG 38858
Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| |||||||| || |||| || || ||||||
Sbjct 38859 GTTTTTCCAGTTAAGGTCTTAACAAAGATTTGCATT 38894
Score = 96.9 bits (106), Expect = 6e-15
Identities = 131/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
|||||||||||||| | || | | | || ||||||||||| || |||||||| | |||
Sbjct 38939 AATATTATAATCTGCGAGAGTCCTTCCATCTTCCAATTGTTTCCCTGCAAAAATCAGTCT 38998
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
||| ||||| ||||| || || || ||||| ||||| || || |||||| || ||
Sbjct 38999 CTGCTGGTCTGGTGGGATACCCTCCTTATCCTGTATCTTGGCCTTCACATTATCAATGGT 39058
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
||| || || || || | || || || || || || || || || | || |||||
Sbjct 39059 ATCGGAACTCTCCACCTCCAACGTGATCGTCTTCCCCGTCAAAGTCTTCACAAAGATCTG 39118
Query 172067 CAT 172069
|||
Sbjct 39119 CAT 39121
>seq23306
Length=7682
Score = 98.7 bits (108), Expect = 2e-15
Identities = 160/229 (70%), Gaps = 1/229 (0%)
Strand=Plus/Plus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
||| || | ||| || || || | ||| | ||| | || || ||||| ||||| |
Sbjct 4497 ACCTCCGCGAAGACGCAACACAAGATGGAGAGTGGATTCCTTCTGGATATTGTAATCAGC 4556
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
| | ||| | || || | |||||| |||||||||||||| || ||||| || || ||
Sbjct 4557 AAGTGTTCGACCATCCTCGAGTTGTTTTCCAGCAAAAATTAACCTTTGTTGATCTGGAGG 4616
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACA-TTAGTTATAGTATCTGACGATTCTA 172020
|||||||| || ||||| ||||| |||| ||| ||| || || || || || |
Sbjct 4617 AATTCCTTCCTTGTCTTGAATTTTTGTTTTAACATTTATCAATGGTGTCCGAGCTCTCAA 4676
Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
| || || |||||||| || || || | ||| |||| || || |||||
Sbjct 4677 CCTCGAGTGTAATGGTCTTTCCTGTGAGTGTCTTAACAAAGATTTGCAT 4725
>seq144114
Length=50763
Score = 95.1 bits (104), Expect = 2e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 171966 CCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCT 172025
|||||||| ||||||||||| ||| ||||| || ||||| ||||| |||||
Sbjct 14031 CCTTCTTTGTCTTGTATTTTGGCTTTAACATTGTCGATTGTATCACTGGATTCAACTTCG 13972
Query 172026 AGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||| |||||||||||||| | ||||| | |||||||||||||||
Sbjct 13971 AGAGTTATGGTTTTACCAGTGAGAGTTTTCACGAATATCTGCATTTT 13925
>seq80500
Length=192803
Score = 95.1 bits (104), Expect = 2e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 171966 CCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCT 172025
||||| || ||||||||||| ||| ||||| |||||||| ||||| |||||
Sbjct 167202 CCTTCCTTGTCTTGTATTTTGGCTTTAACATTGTCGATAGTATCACTGGATTCAACTTCG 167261
Query 172026 AGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||| |||||||||||||| | ||||| | |||||||||||||||
Sbjct 167262 AGAGTTATGGTTTTACCAGTGAGAGTTTTCACGAATATCTGCATTTT 167308
>seq64032
Length=36390
Score = 89.7 bits (98), Expect = 9e-13
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
|| |||||||||| | | || | || |||| || |||||||||||||| | |||
Sbjct 9676 ATGTTATAATCTGCAAGGGTACGACCATCCTCCAGCTGCTTACCAGCAAAAATCAGCCTC 9735
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|| || || ||||| || || || || || || || || ||| |||||| ||||||
Sbjct 9736 TGCTGATCTGGTGGAATACCCTCCTTGTCCTGAATCTTTGCTTTCACATTATCAATAGTA 9795
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
||||| || || || | ||| ||||| || ||||||| || || | || ||||||
Sbjct 9796 TCTGAGCTCTCCACCTCCAAAGTGATGGTCTTCCCAGTTAGAGTCTTGACAAAAATCTGC 9855
Query 172068 AT 172069
||
Sbjct 9856 AT 9857
Score = 86.0 bits (94), Expect = 1e-11
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| || || || || || | || ||||| | || | ||| || |||||||||||
Sbjct 9856 ATCCCTCCCCTCAGACGGAGCACCAAATGCAGTGTGGACTCCTTCTGGATATTATAATCA 9915
Query 171900 GATAAAGATCGTTCG-TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGG 171958
| || | || | | || || | || ||||||||||| || |||| ||| || || ||
Sbjct 9916 GC-AAGGGTCCTCCCATCCTCAAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATCCGG 9974
Query 171959 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTC 172018
||| || |||||||||||||| || || || |||||| || ||||| || |||
Sbjct 9975 TGGAATCCCTTCTTTATCTTGGATCTTCGCCTTCACATTATCAATTGTATCAGAACTTTC 10034
Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || | || || || || || || ||||| || | || ||||||||
Sbjct 10035 GACCTCCAAGGTGATTGTCTTCCCTGTCAATGTCTTCACAAAGATCTGCAT 10085
>seq115373
Length=61324
Score = 87.8 bits (96), Expect = 3e-12
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 171861 ACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCG-TCATC 171919
|| ||||| || || | |||||| ||||| ||||| | || | || | | || ||
Sbjct 29467 ACCAAATGCAACGTGGACTCTTTCTGGATATTGTAATCAGC-AAGGGTCCTCCCATCCTC 29409
Query 171920 CAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTG 171979
| || ||||||||||| || |||| ||| || || ||||| || ||||||||||||||
Sbjct 29408 AAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATCTGGTGGAATCCCTTCTTTATCTTG 29349
Query 171980 TATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTT 172039
|| || ||||| ||| || ||||| || ||| || || | || || || ||
Sbjct 29348 GATCTTCGCCTTTACGTTATCAATTGTATCAGAACTTTCGACCTCCAAGGTGATCGTCTT 29289
Query 172040 ACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || ||||| || | || ||||||||
Sbjct 29288 CCCTGTCAATGTCTTCACAAAGATCTGCAT 29259
Score = 86.0 bits (94), Expect = 1e-11
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
|| |||||||||| | | || | || |||| || |||||||||||||| || |||
Sbjct 29668 ATGTTATAATCTGCAAGGGTACGACCATCCTCCAGCTGCTTACCAGCAAAAATCAACCTC 29609
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|| || || || || || || || || || || || || ||| |||||| ||||||
Sbjct 29608 TGCTGATCTGGGGGAATACCCTCCTTGTCCTGAATCTTTGCTTTCACATTATCAATAGTA 29549
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
|| || || || || | ||| || || || ||||||| || || | |||||||||
Sbjct 29548 TCAGAGCTCTCCACCTCCAAAGTGATAGTCTTCCCAGTTAGAGTCTTGACAAATATCTGC 29489
Query 172068 AT 172069
||
Sbjct 29488 AT 29487
>seq6766
Length=3307
Score = 84.2 bits (92), Expect = 4e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 171866 ATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTG 171925
||| | ||||| |||||| ||||| || |||| | | || | || || | ||
Sbjct 1997 ATGAAGAGTAGACTCTTTCTGGATATTGTAGTCTGCAAGGGTGCGACCATCCTCAAGCTG 1938
Query 171926 TTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTT 171985
||||||||||| || | ||||| || || ||||| || ||||| ||||| ||||| ||
Sbjct 1937 CTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGCATGCCTTCCTTATCCTGTATCTT 1878
Query 171986 ATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGT 172045
|| ||||| || |||||||| || || || | || || || || |||||
Sbjct 1877 TGCCTTCACATTGTCAATGGTATCTGAGCTCTCCACCTCCAAGGTGATTGTCTTCCCAGT 1818
Query 172046 TAATGTTTTAATGAATATCTGCAT 172069
||||| || | |||||||||||
Sbjct 1817 CAATGTCTTCACAAATATCTGCAT 1794
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903232419792600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |